A proposal to sequence the genome of a garter snake (Thamnophis sirtalis) View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2011-04-29

AUTHORS

Todd A. Castoe, Anne M. Bronikowski, Edmund D. Brodie, Scott V. Edwards, Michael E. Pfrender, Michael D. Shapiro, David D. Pollock, Wesley C. Warren

ABSTRACT

Here we develop an argument in support of sequencing a garter snake (Thamnophis sirtalis) genome, and outline a plan to accomplish this. This snake is a common, widespread, nonvenomous North American species that has served as a model for diverse studies in evolutionary biology, physiology, genomics, behavior and coevolution. The anole lizard is currently the only genome sequence available for a non-avian reptile. Thus, the garter snake at this time would be the first available snake genome sequence and as such would provide much needed comparative representation of non-avian reptilian genomes, and would also allow critical new insights for vertebrate comparative genomic studies. We outline the major areas of discovery that the availability of the garter snake genome would enable, and describe a plan for whole-genome sequencing. More... »

PAGES

257-270

References to SciGraph publications

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  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.4056/sigs.1664145

    DOI

    http://dx.doi.org/10.4056/sigs.1664145

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1043113716

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/21677863


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