Complete genome sequence of Pseudomonas stutzeri strain RCH2 isolated from a Hexavalent Chromium [Cr(VI)] contaminated site View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2017-02-08

AUTHORS

Romy Chakraborty, Hannah Woo, Paramvir Dehal, Robert Walker, Marcin Zemla, Manfred Auer, Lynne A. Goodwin, Alexey Kazakov, Pavel Novichkov, Adam P. Arkin, Terry C. Hazen

ABSTRACT

Hexavalent Chromium [Cr(VI)] is a widespread contaminant found in soil, sediment, and ground water in several DOE sites, including Hanford 100 H area. In order to stimulate microbially mediated reduction of Cr(VI) at this site, a poly-lactate hydrogen release compound was injected into the chromium contaminated aquifer. Targeted enrichment of dominant nitrate-reducing bacteria post injection resulted in the isolation of Pseudomonas stutzeri strain RCH2. P. stutzeri strain RCH2 was isolated using acetate as the electron donor and is a complete denitrifier. Experiments with anaerobic washed cell suspension of strain RCH2 revealed it could reduce Cr(VI) and Fe(III). The genome of strain RCH2 was sequenced using a combination of Illumina and 454 sequencing technologies and contained a circular chromosome of 4.6 Mb and three plasmids. Global genome comparisons of strain RCH2 with six other fully sequenced P. stutzeri strains revealed most genomic regions are conserved, however strain RCH2 has an additional 244 genes, some of which are involved in chemotaxis, Flp pilus biogenesis and pyruvate/2-oxogluturate complex formation. More... »

PAGES

23

Identifiers

URI

http://scigraph.springernature.com/pub.10.1186/s40793-017-0233-7

DOI

http://dx.doi.org/10.1186/s40793-017-0233-7

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1083753590

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/28194258


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.184769.5", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Chakraborty", 
        "givenName": "Romy", 
        "id": "sg:person.01152600433.86", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01152600433.86"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University Of Tennessee, Knoxville, TN USA", 
          "id": "http://www.grid.ac/institutes/grid.411461.7", 
          "name": [
            "University Of Tennessee, Knoxville, TN USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Woo", 
        "givenName": "Hannah", 
        "id": "sg:person.01243460364.46", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01243460364.46"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.184769.5", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Dehal", 
        "givenName": "Paramvir", 
        "id": "sg:person.0653204443.31", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0653204443.31"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.184769.5", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Walker", 
        "givenName": "Robert", 
        "id": "sg:person.01130236254.88", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01130236254.88"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.184769.5", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Zemla", 
        "givenName": "Marcin", 
        "id": "sg:person.0614403746.25", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0614403746.25"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.184769.5", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Auer", 
        "givenName": "Manfred", 
        "id": "sg:person.0652233644.88", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0652233644.88"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Energy Joint Genome Institute, Walnut Creek, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.451309.a", 
          "name": [
            "Department of Energy Joint Genome Institute, Walnut Creek, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Goodwin", 
        "givenName": "Lynne A.", 
        "id": "sg:person.0644576263.72", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0644576263.72"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.184769.5", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Kazakov", 
        "givenName": "Alexey", 
        "id": "sg:person.0637635546.93", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0637635546.93"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.184769.5", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Novichkov", 
        "givenName": "Pavel", 
        "id": "sg:person.0755612054.10", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0755612054.10"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
          "id": "http://www.grid.ac/institutes/grid.184769.5", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Arkin", 
        "givenName": "Adam P.", 
        "id": "sg:person.01023730045.28", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01023730045.28"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University Of Tennessee, Knoxville, TN USA", 
          "id": "http://www.grid.ac/institutes/grid.411461.7", 
          "name": [
            "Lawrence Berkeley National Laboratory, Berkeley, CA USA", 
            "University Of Tennessee, Knoxville, TN USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hazen", 
        "givenName": "Terry C.", 
        "id": "sg:person.0613504763.67", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0613504763.67"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1007/s10534-006-9022-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004115493", 
          "https://doi.org/10.1007/s10534-006-9022-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2105-10-421", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050579230", 
          "https://doi.org/10.1186/1471-2105-10-421"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature03959", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021574562", 
          "https://doi.org/10.1038/nature03959"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1023/a:1026750810580", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000257497", 
          "https://doi.org/10.1023/a:1026750810580"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nmeth.1457", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014321989", 
          "https://doi.org/10.1038/nmeth.1457"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2164-12-402", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028853462", 
          "https://doi.org/10.1186/1471-2164-12-402"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2164-14-745", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019212287", 
          "https://doi.org/10.1186/1471-2164-14-745"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/75556", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044135237", 
          "https://doi.org/10.1038/75556"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/0-387-31113-0_12", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015251098", 
          "https://doi.org/10.1007/0-387-31113-0_12"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/0-387-29298-5_1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052275416", 
          "https://doi.org/10.1007/0-387-29298-5_1"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nbt1360", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038439506", 
          "https://doi.org/10.1038/nbt1360"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2105-11-119", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026423599", 
          "https://doi.org/10.1186/1471-2105-11-119"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2017-02-08", 
    "datePublishedReg": "2017-02-08", 
    "description": "Hexavalent Chromium [Cr(VI)] is a widespread contaminant found in soil, sediment, and ground water in several DOE sites, including Hanford 100\u00a0H area. In order to stimulate microbially mediated reduction of Cr(VI) at this site, a poly-lactate hydrogen release compound was injected into the chromium contaminated aquifer. Targeted enrichment of dominant nitrate-reducing bacteria post injection resulted in the isolation of Pseudomonas stutzeri strain RCH2. P. stutzeri strain RCH2 was isolated using acetate as the electron donor and is a complete denitrifier. Experiments with anaerobic washed cell suspension of strain RCH2 revealed it could reduce Cr(VI) and Fe(III). The genome of strain RCH2 was sequenced using a combination of Illumina and 454 sequencing technologies and contained a circular chromosome of 4.6\u00a0Mb and three plasmids. Global genome comparisons of strain RCH2 with six other fully sequenced P. stutzeri strains revealed most genomic regions are conserved, however strain RCH2 has an additional 244 genes, some of which are involved in chemotaxis, Flp pilus biogenesis and pyruvate/2-oxogluturate complex formation.", 
    "genre": "article", 
    "id": "sg:pub.10.1186/s40793-017-0233-7", 
    "inLanguage": "en", 
    "isAccessibleForFree": true, 
    "isPartOf": [
      {
        "id": "sg:journal.1357741", 
        "issn": [
          "2524-6372"
        ], 
        "name": "Environmental Microbiome", 
        "publisher": "Springer Nature", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "12"
      }
    ], 
    "keywords": [
      "combination of Illumina", 
      "most genomic regions", 
      "complete genome sequence", 
      "circular chromosome", 
      "pilus biogenesis", 
      "genome comparison", 
      "genome sequence", 
      "genomic regions", 
      "sequencing technologies", 
      "Hydrogen Release Compound", 
      "complete denitrifiers", 
      "washed cell suspension", 
      "complex formation", 
      "RCH2", 
      "widespread contaminants", 
      "cell suspensions", 
      "biogenesis", 
      "genome", 
      "Illumina", 
      "electron donor", 
      "chromosomes", 
      "release compounds", 
      "genes", 
      "sites", 
      "plasmid", 
      "hexavalent chromium", 
      "denitrifiers", 
      "sequence", 
      "chemotaxis", 
      "enrichment", 
      "MB", 
      "isolation", 
      "soil", 
      "region", 
      "formation", 
      "sediments", 
      "compounds", 
      "contaminants", 
      "water", 
      "experiments", 
      "combination", 
      "donors", 
      "post injection", 
      "suspension", 
      "mediated reduction", 
      "chromium", 
      "ground water", 
      "area", 
      "comparison", 
      "reduction", 
      "DOE sites", 
      "order", 
      "technology", 
      "injection", 
      "aquifer", 
      "Hanford 100", 
      "poly-lactate hydrogen release compound", 
      "dominant nitrate-reducing bacteria post injection", 
      "nitrate-reducing bacteria post injection", 
      "bacteria post injection", 
      "strain RCH2", 
      "anaerobic washed cell suspension", 
      "Global genome comparisons", 
      "Flp pilus biogenesis", 
      "pyruvate/2-oxogluturate complex formation", 
      "Pseudomonas stutzeri strain RCH2", 
      "stutzeri strain RCH2"
    ], 
    "name": "Complete genome sequence of Pseudomonas stutzeri strain RCH2 isolated from a Hexavalent Chromium [Cr(VI)] contaminated site", 
    "pagination": "23", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1083753590"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1186/s40793-017-0233-7"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "28194258"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1186/s40793-017-0233-7", 
      "https://app.dimensions.ai/details/publication/pub.1083753590"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2021-12-01T19:41", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20211201/entities/gbq_results/article/article_751.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1186/s40793-017-0233-7"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1186/s40793-017-0233-7'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1186/s40793-017-0233-7'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1186/s40793-017-0233-7'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1186/s40793-017-0233-7'


 

This table displays all metadata directly associated to this object as RDF triples.

253 TRIPLES      22 PREDICATES      105 URIs      85 LITERALS      7 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1186/s40793-017-0233-7 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N9fd5863b879b4c739e70b0d37d2824a1
4 schema:citation sg:pub.10.1007/0-387-29298-5_1
5 sg:pub.10.1007/0-387-31113-0_12
6 sg:pub.10.1007/s10534-006-9022-2
7 sg:pub.10.1023/a:1026750810580
8 sg:pub.10.1038/75556
9 sg:pub.10.1038/nature03959
10 sg:pub.10.1038/nbt1360
11 sg:pub.10.1038/nmeth.1457
12 sg:pub.10.1186/1471-2105-10-421
13 sg:pub.10.1186/1471-2105-11-119
14 sg:pub.10.1186/1471-2164-12-402
15 sg:pub.10.1186/1471-2164-14-745
16 schema:datePublished 2017-02-08
17 schema:datePublishedReg 2017-02-08
18 schema:description Hexavalent Chromium [Cr(VI)] is a widespread contaminant found in soil, sediment, and ground water in several DOE sites, including Hanford 100 H area. In order to stimulate microbially mediated reduction of Cr(VI) at this site, a poly-lactate hydrogen release compound was injected into the chromium contaminated aquifer. Targeted enrichment of dominant nitrate-reducing bacteria post injection resulted in the isolation of <i>Pseudomonas stutzeri</i> strain RCH2. <i>P. stutzeri</i> strain RCH2 was isolated using acetate as the electron donor and is a complete denitrifier. Experiments with anaerobic washed cell suspension of strain RCH2 revealed it could reduce Cr(VI) and Fe(III). The genome of strain RCH2 was sequenced using a combination of Illumina and 454 sequencing technologies and contained a circular chromosome of 4.6 Mb and three plasmids. Global genome comparisons of strain RCH2 with six other fully sequenced <i>P. stutzeri</i> strains revealed most genomic regions are conserved, however strain RCH2 has an additional 244 genes, some of which are involved in chemotaxis, Flp pilus biogenesis and pyruvate/2-oxogluturate complex formation.
19 schema:genre article
20 schema:inLanguage en
21 schema:isAccessibleForFree true
22 schema:isPartOf N6dd52753b633439b9f36618c01b0a259
23 Nd1cd195fa2ad4da8aafb274d830635e4
24 sg:journal.1357741
25 schema:keywords DOE sites
26 Flp pilus biogenesis
27 Global genome comparisons
28 Hanford 100
29 Hydrogen Release Compound
30 Illumina
31 MB
32 Pseudomonas stutzeri strain RCH2
33 RCH2
34 anaerobic washed cell suspension
35 aquifer
36 area
37 bacteria post injection
38 biogenesis
39 cell suspensions
40 chemotaxis
41 chromium
42 chromosomes
43 circular chromosome
44 combination
45 combination of Illumina
46 comparison
47 complete denitrifiers
48 complete genome sequence
49 complex formation
50 compounds
51 contaminants
52 denitrifiers
53 dominant nitrate-reducing bacteria post injection
54 donors
55 electron donor
56 enrichment
57 experiments
58 formation
59 genes
60 genome
61 genome comparison
62 genome sequence
63 genomic regions
64 ground water
65 hexavalent chromium
66 injection
67 isolation
68 mediated reduction
69 most genomic regions
70 nitrate-reducing bacteria post injection
71 order
72 pilus biogenesis
73 plasmid
74 poly-lactate hydrogen release compound
75 post injection
76 pyruvate/2-oxogluturate complex formation
77 reduction
78 region
79 release compounds
80 sediments
81 sequence
82 sequencing technologies
83 sites
84 soil
85 strain RCH2
86 stutzeri strain RCH2
87 suspension
88 technology
89 washed cell suspension
90 water
91 widespread contaminants
92 schema:name Complete genome sequence of Pseudomonas stutzeri strain RCH2 isolated from a Hexavalent Chromium [Cr(VI)] contaminated site
93 schema:pagination 23
94 schema:productId N3952d1c2a13f49e987a065ecb61ef8e1
95 N466baf8ca7b9460485ddee012cb88add
96 N563240bafe99476fb8efc368122e618d
97 schema:sameAs https://app.dimensions.ai/details/publication/pub.1083753590
98 https://doi.org/10.1186/s40793-017-0233-7
99 schema:sdDatePublished 2021-12-01T19:41
100 schema:sdLicense https://scigraph.springernature.com/explorer/license/
101 schema:sdPublisher N654525be572944b2b8aea35581eb0cf2
102 schema:url https://doi.org/10.1186/s40793-017-0233-7
103 sgo:license sg:explorer/license/
104 sgo:sdDataset articles
105 rdf:type schema:ScholarlyArticle
106 N0a52cfdb936e457fa15aecf81f675d1f rdf:first sg:person.0613504763.67
107 rdf:rest rdf:nil
108 N109c10bf6a4845b5bb7b7fc5924fb9bc rdf:first sg:person.0755612054.10
109 rdf:rest Nc9c39ab4866a41c686b7f5de853a2e77
110 N3698b71c75974987b89516c68b131ab1 rdf:first sg:person.0652233644.88
111 rdf:rest N97863af18b1a4f458d847919ebc0db8e
112 N3952d1c2a13f49e987a065ecb61ef8e1 schema:name dimensions_id
113 schema:value pub.1083753590
114 rdf:type schema:PropertyValue
115 N3facaca71b5643078261b24df393e3b5 rdf:first sg:person.0614403746.25
116 rdf:rest N3698b71c75974987b89516c68b131ab1
117 N466baf8ca7b9460485ddee012cb88add schema:name doi
118 schema:value 10.1186/s40793-017-0233-7
119 rdf:type schema:PropertyValue
120 N563240bafe99476fb8efc368122e618d schema:name pubmed_id
121 schema:value 28194258
122 rdf:type schema:PropertyValue
123 N5800c8e8e8d4454399aae6b243d39064 rdf:first sg:person.0637635546.93
124 rdf:rest N109c10bf6a4845b5bb7b7fc5924fb9bc
125 N654525be572944b2b8aea35581eb0cf2 schema:name Springer Nature - SN SciGraph project
126 rdf:type schema:Organization
127 N6dd52753b633439b9f36618c01b0a259 schema:issueNumber 1
128 rdf:type schema:PublicationIssue
129 N97863af18b1a4f458d847919ebc0db8e rdf:first sg:person.0644576263.72
130 rdf:rest N5800c8e8e8d4454399aae6b243d39064
131 N9fd5863b879b4c739e70b0d37d2824a1 rdf:first sg:person.01152600433.86
132 rdf:rest Nb004251c143148308e1bda38c7086f2c
133 Nb004251c143148308e1bda38c7086f2c rdf:first sg:person.01243460364.46
134 rdf:rest Nf470e9b5e2a645b9b778b3f6297dae0a
135 Nc4b4d2e15b7e4900a4f4a442f0cdff75 rdf:first sg:person.01130236254.88
136 rdf:rest N3facaca71b5643078261b24df393e3b5
137 Nc9c39ab4866a41c686b7f5de853a2e77 rdf:first sg:person.01023730045.28
138 rdf:rest N0a52cfdb936e457fa15aecf81f675d1f
139 Nd1cd195fa2ad4da8aafb274d830635e4 schema:volumeNumber 12
140 rdf:type schema:PublicationVolume
141 Nf470e9b5e2a645b9b778b3f6297dae0a rdf:first sg:person.0653204443.31
142 rdf:rest Nc4b4d2e15b7e4900a4f4a442f0cdff75
143 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
144 schema:name Biological Sciences
145 rdf:type schema:DefinedTerm
146 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
147 schema:name Genetics
148 rdf:type schema:DefinedTerm
149 sg:journal.1357741 schema:issn 2524-6372
150 schema:name Environmental Microbiome
151 schema:publisher Springer Nature
152 rdf:type schema:Periodical
153 sg:person.01023730045.28 schema:affiliation grid-institutes:grid.184769.5
154 schema:familyName Arkin
155 schema:givenName Adam P.
156 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01023730045.28
157 rdf:type schema:Person
158 sg:person.01130236254.88 schema:affiliation grid-institutes:grid.184769.5
159 schema:familyName Walker
160 schema:givenName Robert
161 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01130236254.88
162 rdf:type schema:Person
163 sg:person.01152600433.86 schema:affiliation grid-institutes:grid.184769.5
164 schema:familyName Chakraborty
165 schema:givenName Romy
166 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01152600433.86
167 rdf:type schema:Person
168 sg:person.01243460364.46 schema:affiliation grid-institutes:grid.411461.7
169 schema:familyName Woo
170 schema:givenName Hannah
171 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01243460364.46
172 rdf:type schema:Person
173 sg:person.0613504763.67 schema:affiliation grid-institutes:grid.411461.7
174 schema:familyName Hazen
175 schema:givenName Terry C.
176 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0613504763.67
177 rdf:type schema:Person
178 sg:person.0614403746.25 schema:affiliation grid-institutes:grid.184769.5
179 schema:familyName Zemla
180 schema:givenName Marcin
181 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0614403746.25
182 rdf:type schema:Person
183 sg:person.0637635546.93 schema:affiliation grid-institutes:grid.184769.5
184 schema:familyName Kazakov
185 schema:givenName Alexey
186 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0637635546.93
187 rdf:type schema:Person
188 sg:person.0644576263.72 schema:affiliation grid-institutes:grid.451309.a
189 schema:familyName Goodwin
190 schema:givenName Lynne A.
191 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0644576263.72
192 rdf:type schema:Person
193 sg:person.0652233644.88 schema:affiliation grid-institutes:grid.184769.5
194 schema:familyName Auer
195 schema:givenName Manfred
196 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0652233644.88
197 rdf:type schema:Person
198 sg:person.0653204443.31 schema:affiliation grid-institutes:grid.184769.5
199 schema:familyName Dehal
200 schema:givenName Paramvir
201 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0653204443.31
202 rdf:type schema:Person
203 sg:person.0755612054.10 schema:affiliation grid-institutes:grid.184769.5
204 schema:familyName Novichkov
205 schema:givenName Pavel
206 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0755612054.10
207 rdf:type schema:Person
208 sg:pub.10.1007/0-387-29298-5_1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052275416
209 https://doi.org/10.1007/0-387-29298-5_1
210 rdf:type schema:CreativeWork
211 sg:pub.10.1007/0-387-31113-0_12 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015251098
212 https://doi.org/10.1007/0-387-31113-0_12
213 rdf:type schema:CreativeWork
214 sg:pub.10.1007/s10534-006-9022-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004115493
215 https://doi.org/10.1007/s10534-006-9022-2
216 rdf:type schema:CreativeWork
217 sg:pub.10.1023/a:1026750810580 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000257497
218 https://doi.org/10.1023/a:1026750810580
219 rdf:type schema:CreativeWork
220 sg:pub.10.1038/75556 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044135237
221 https://doi.org/10.1038/75556
222 rdf:type schema:CreativeWork
223 sg:pub.10.1038/nature03959 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021574562
224 https://doi.org/10.1038/nature03959
225 rdf:type schema:CreativeWork
226 sg:pub.10.1038/nbt1360 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038439506
227 https://doi.org/10.1038/nbt1360
228 rdf:type schema:CreativeWork
229 sg:pub.10.1038/nmeth.1457 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014321989
230 https://doi.org/10.1038/nmeth.1457
231 rdf:type schema:CreativeWork
232 sg:pub.10.1186/1471-2105-10-421 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050579230
233 https://doi.org/10.1186/1471-2105-10-421
234 rdf:type schema:CreativeWork
235 sg:pub.10.1186/1471-2105-11-119 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026423599
236 https://doi.org/10.1186/1471-2105-11-119
237 rdf:type schema:CreativeWork
238 sg:pub.10.1186/1471-2164-12-402 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028853462
239 https://doi.org/10.1186/1471-2164-12-402
240 rdf:type schema:CreativeWork
241 sg:pub.10.1186/1471-2164-14-745 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019212287
242 https://doi.org/10.1186/1471-2164-14-745
243 rdf:type schema:CreativeWork
244 grid-institutes:grid.184769.5 schema:alternateName Lawrence Berkeley National Laboratory, Berkeley, CA USA
245 schema:name Lawrence Berkeley National Laboratory, Berkeley, CA USA
246 rdf:type schema:Organization
247 grid-institutes:grid.411461.7 schema:alternateName University Of Tennessee, Knoxville, TN USA
248 schema:name Lawrence Berkeley National Laboratory, Berkeley, CA USA
249 University Of Tennessee, Knoxville, TN USA
250 rdf:type schema:Organization
251 grid-institutes:grid.451309.a schema:alternateName Department of Energy Joint Genome Institute, Walnut Creek, CA USA
252 schema:name Department of Energy Joint Genome Institute, Walnut Creek, CA USA
253 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...