Draft genome of Gemmata massiliana sp. nov, a water-borne Planctomycetes species exhibiting two variants View Full Text


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Article Info

DATE

2015-12

AUTHORS

Rita Aghnatios, Caroline Cayrou, Marc Garibal, Catherine Robert, Said Azza, Didier Raoult, Michel Drancourt

ABSTRACT

Gemmata massiliana is a new Planctomycetes bacterium isolated from a hospital water network in France, using a new culture medium. It is an aerobic microorganism with optimal growth at pH 8, at 30 °C and salinity ≤ 1.25 % NaCl. G. massiliana is resistant to β-lactam antibiotics, due to lack of peptidoglycan in its cell wall.G. massiliana shares a 97 % 16S rRNA gene sequence similarity with the nearest species, Gemmata obscuriglobus; and 99 % similarity with unnamed soil isolates. Its 9,249,437-bp genome consists in one chromosome and no detectable plasmid and has a 64.07 % G + C content, 32.94 % of genes encoding for hypothetical proteins. The genome contains an incomplete 19.6-kb phage sequence, 26 CRISPRs, 3 CAS and 15 clusters of secondary metabolites. G. massiliana genome increases knowledge of a poorly known world of bacteria. More... »

PAGES

120

References to SciGraph publications

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  • Journal

    TITLE

    Standards in Genomic Sciences

    ISSUE

    1

    VOLUME

    10

    Author Affiliations

    Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1186/s40793-015-0103-0

    DOI

    http://dx.doi.org/10.1186/s40793-015-0103-0

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1006573317

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/26649148


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    Turtle is a human-readable linked data format.

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    RDF/XML is a standard XML format for linked data.

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