Innate immunity in the simplest animals – placozoans View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2019-12

AUTHORS

Kai Kamm, Bernd Schierwater, Rob DeSalle

ABSTRACT

BACKGROUND: Innate immunity provides the core recognition system in animals for preventing infection, but also plays an important role in managing the relationship between an animal host and its symbiont. Most of our knowledge about innate immunity stems from a few animal model systems, but substantial variation between metazoan phyla has been revealed by comparative genomic studies. The exploration of more taxa is still needed to better understand the evolution of immunity related mechanisms. Placozoans are morphologically the simplest organized metazoans and the association between these enigmatic animals and their rickettsial endosymbionts has recently been elucidated. Our analyses of the novel placozoan nuclear genome of Trichoplax sp. H2 and its associated rickettsial endosymbiont genome clearly pointed to a mutualistic and co-evolutionary relationship. This discovery raises the question of how the placozoan holobiont manages symbiosis and, conversely, how it defends against harmful microorganisms. In this study, we examined the annotated genome of Trichoplax sp. H2 for the presence of genes involved in innate immune recognition and downstream signaling. RESULTS: A rich repertoire of genes belonging to the Toll-like and NOD-like receptor pathways, to scavenger receptors and to secreted fibrinogen-related domain genes was identified in the genome of Trichoplax sp. H2. Nevertheless, the innate immunity related pathways in placozoans deviate in several instances from well investigated vertebrates and invertebrates. While true Toll- and NOD-like receptors are absent, the presence of many genes of the downstream signaling cascade suggests at least primordial Toll-like receptor signaling in Placozoa. An abundance of scavenger receptors, fibrinogen-related domain genes and Apaf-1 genes clearly constitutes an expansion of the immunity related gene repertoire specific to Placozoa. CONCLUSIONS: The found wealth of immunity related genes present in Placozoa is surprising and quite striking in light of the extremely simple placozoan body plan and their sparse cell type makeup. Research is warranted to reveal how Placozoa utilize this immune repertoire to manage and maintain their associated microbiota as well as to fend-off pathogens. More... »

PAGES

5

References to SciGraph publications

  • 2004-04. The Trox-2 Hox/ParaHox gene of Trichoplax (Placozoa) marks an epithelial boundary in DEVELOPMENT GENES AND EVOLUTION
  • 2013-06-18. Innate immune recognition of the microbiota promotes host-microbial symbiosis in NATURE IMMUNOLOGY
  • 2015-08. Recognition of microbial glycans by human intelectin-1 in NATURE STRUCTURAL & MOLECULAR BIOLOGY
  • 1981-07. Ergänzende Untersuchungen zur Ultrastruktur von Trichoplax adhaerens F.E. Schulze (Placozoa) in ZOOMORPHOLOGY
  • 2011-10. SignalP 4.0: discriminating signal peptides from transmembrane regions in NATURE METHODS
  • 2007-06. The innate immune repertoire in Cnidaria - ancestral complexity and stochastic gene loss in GENOME BIOLOGY
  • 2013-09. Scavenger receptors in homeostasis and immunity in NATURE REVIEWS IMMUNOLOGY
  • 2008-12. The amphioxus (Branchiostoma floridae) genome contains a highly diversified set of G protein-coupled receptors in BMC EVOLUTIONARY BIOLOGY
  • 2008-08. The Trichoplax genome and the nature of placozoans in NATURE
  • 1972-12. Eibildung und furchung von Trichoplax adhaerens F. E. Schulze (Placozoa) in ZOOMORPHOLOGY
  • 2008-02. Phagocytosis and comparative innate immunity: learning on the fly in NATURE REVIEWS IMMUNOLOGY
  • 2018-12. Trichoplax genomes reveal profound admixture and suggest stable wild populations without bisexual reproduction in SCIENTIFIC REPORTS
  • 2009-12. BLAST+: architecture and applications in BMC BIOINFORMATICS
  • 2002-05. Evolution of the lectin–complement pathway and its role in innate immunity in NATURE REVIEWS IMMUNOLOGY
  • 2011-10. Characterization of bbtTICAM from amphioxus suggests the emergence of a MyD88-independent pathway in basal chordates in CELL RESEARCH
  • 2008-01. The transcription factor NF-κB in the demosponge Amphimedon queenslandica: insights on the evolutionary origin of the Rel homology domain in DEVELOPMENT GENES AND EVOLUTION
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1186/s12864-018-5377-3

    DOI

    http://dx.doi.org/10.1186/s12864-018-5377-3

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1111161482

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/30611207


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