Ontology type: schema:ScholarlyArticle Open Access: True
2018-12
AUTHORSThi Thu Huyen Chu, Thi Giang Hoang, Duy Chi Trinh, Charlotte Bureau, Donaldo Meynard, Aurore Vernet, Mathieu Ingouff, Nang Vinh Do, Christophe Périn, Emmanuel Guiderdoni, Pascal Gantet, Christophe Maurel, Doan-Trung Luu
ABSTRACTBACKGROUND: Cell biology approach using membrane protein markers tagged with fluorescent proteins highlights the dynamic behaviour of plant cell membranes, not only in the standard but also in changing environmental conditions. In the past, this strategy has been extensively developed in plant models such as Arabidopsis. RESULTS: Here, we generated a set of transgenic lines expressing membrane protein markers to extend this approach to rice, one of the most cultivated crop in the world and an emerging plant model. Lines expressing individually eight membrane protein markers including five aquaporins (OsPIP1;1, OsPIP2;4, OsPIP2;5, OsTIP1;1, OsTIP2;2) and three endosomal trafficking proteins (OsRab5a, OsGAP1, OsSCAMP1) were obtained. Importantly, we challenged in roots the aquaporin-expressing transgenic lines upon salt and osmotic stress and uncovered a highly dynamic behaviour of cell membrane. CONCLUSION: We have uncovered the relocalization and dynamics of plasma membrane aquaporins upon salt and osmotic stresses in rice. Importantly, our data support a model where relocalization of OsPIPs is concomitant with their high cycling dynamics. More... »
PAGES23
http://scigraph.springernature.com/pub.10.1186/s12284-018-0209-2
DOIhttp://dx.doi.org/10.1186/s12284-018-0209-2
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1103244250
PUBMEDhttps://www.ncbi.nlm.nih.gov/pubmed/29651780
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0601",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Biochemistry and Cell Biology",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Biological Sciences",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"alternateName": "Biochemistry and Plant Molecular Physiology",
"id": "https://www.grid.ac/institutes/grid.461861.c",
"name": [
"BPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France",
"University of Science and Technology of Hanoi, LMI RICE, 18 Hoang Quoc Viet, Nghia Do, Cau Giay, Hanoi, Vietnam"
],
"type": "Organization"
},
"familyName": "Chu",
"givenName": "Thi Thu Huyen",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Agricultural Genetics Institute",
"id": "https://www.grid.ac/institutes/grid.499672.7",
"name": [
"National key laboratory for Plant Cell Biotechnology, Agricultural Genetics Institute, Pham Van Dong, Co Nhue, Tuliem, Hanoi, Vietnam",
"University of Science and Technology of Hanoi, LMI RICE, 18 Hoang Quoc Viet, Nghia Do, Cau Giay, Hanoi, Vietnam",
"IRD, LMI RICE, Agricultural Genetics Institute, Pham Van Dong road, Co Nhue, Tuliem, Hano\u00ef, Vietnam"
],
"type": "Organization"
},
"familyName": "Hoang",
"givenName": "Thi Giang",
"id": "sg:person.014157674352.11",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.014157674352.11"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Biochemistry and Plant Molecular Physiology",
"id": "https://www.grid.ac/institutes/grid.461861.c",
"name": [
"BPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France",
"University of Science and Technology of Hanoi, LMI RICE, 18 Hoang Quoc Viet, Nghia Do, Cau Giay, Hanoi, Vietnam"
],
"type": "Organization"
},
"familyName": "Trinh",
"givenName": "Duy Chi",
"type": "Person"
},
{
"affiliation": {
"alternateName": "University of Montpellier",
"id": "https://www.grid.ac/institutes/grid.121334.6",
"name": [
"CIRAD, UMR AGAP, 34398, Montpellier, France",
"Universit\u00e9 de Montpellier, CIRAD-INRA-Montpellier SupAgro, 34000, Montpellier, France"
],
"type": "Organization"
},
"familyName": "Bureau",
"givenName": "Charlotte",
"id": "sg:person.01120553377.28",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01120553377.28"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "University of Montpellier",
"id": "https://www.grid.ac/institutes/grid.121334.6",
"name": [
"CIRAD, UMR AGAP, 34398, Montpellier, France",
"Universit\u00e9 de Montpellier, CIRAD-INRA-Montpellier SupAgro, 34000, Montpellier, France"
],
"type": "Organization"
},
"familyName": "Meynard",
"givenName": "Donaldo",
"id": "sg:person.0672106142.60",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0672106142.60"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "University of Montpellier",
"id": "https://www.grid.ac/institutes/grid.121334.6",
"name": [
"CIRAD, UMR AGAP, 34398, Montpellier, France",
"Universit\u00e9 de Montpellier, CIRAD-INRA-Montpellier SupAgro, 34000, Montpellier, France"
],
"type": "Organization"
},
"familyName": "Vernet",
"givenName": "Aurore",
"id": "sg:person.0677047134.07",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0677047134.07"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "University of Montpellier",
"id": "https://www.grid.ac/institutes/grid.121334.6",
"name": [
"Universit\u00e9 de Montpellier, UMR DIADE, 911 Avenue Agropolis, 34394, Montpellier Cedex 5, France"
],
"type": "Organization"
},
"familyName": "Ingouff",
"givenName": "Mathieu",
"id": "sg:person.01135244707.42",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01135244707.42"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Agricultural Genetics Institute",
"id": "https://www.grid.ac/institutes/grid.499672.7",
"name": [
"National key laboratory for Plant Cell Biotechnology, Agricultural Genetics Institute, Pham Van Dong, Co Nhue, Tuliem, Hanoi, Vietnam",
"IRD, LMI RICE, Agricultural Genetics Institute, Pham Van Dong road, Co Nhue, Tuliem, Hano\u00ef, Vietnam"
],
"type": "Organization"
},
"familyName": "Do",
"givenName": "Nang Vinh",
"id": "sg:person.011013231701.38",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.011013231701.38"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "University of Montpellier",
"id": "https://www.grid.ac/institutes/grid.121334.6",
"name": [
"CIRAD, UMR AGAP, 34398, Montpellier, France",
"Universit\u00e9 de Montpellier, CIRAD-INRA-Montpellier SupAgro, 34000, Montpellier, France"
],
"type": "Organization"
},
"familyName": "P\u00e9rin",
"givenName": "Christophe",
"id": "sg:person.0733357650.50",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0733357650.50"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "University of Montpellier",
"id": "https://www.grid.ac/institutes/grid.121334.6",
"name": [
"CIRAD, UMR AGAP, 34398, Montpellier, France",
"Universit\u00e9 de Montpellier, CIRAD-INRA-Montpellier SupAgro, 34000, Montpellier, France"
],
"type": "Organization"
},
"familyName": "Guiderdoni",
"givenName": "Emmanuel",
"id": "sg:person.01167675750.85",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01167675750.85"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "University of Montpellier",
"id": "https://www.grid.ac/institutes/grid.121334.6",
"name": [
"University of Science and Technology of Hanoi, LMI RICE, 18 Hoang Quoc Viet, Nghia Do, Cau Giay, Hanoi, Vietnam",
"IRD, LMI RICE, Agricultural Genetics Institute, Pham Van Dong road, Co Nhue, Tuliem, Hano\u00ef, Vietnam",
"Universit\u00e9 de Montpellier, UMR DIADE, 911 Avenue Agropolis, 34394, Montpellier Cedex 5, France"
],
"type": "Organization"
},
"familyName": "Gantet",
"givenName": "Pascal",
"id": "sg:person.01303065763.71",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01303065763.71"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Biochemistry and Plant Molecular Physiology",
"id": "https://www.grid.ac/institutes/grid.461861.c",
"name": [
"BPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France"
],
"type": "Organization"
},
"familyName": "Maurel",
"givenName": "Christophe",
"id": "sg:person.01212713315.85",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01212713315.85"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Biochemistry and Plant Molecular Physiology",
"id": "https://www.grid.ac/institutes/grid.461861.c",
"name": [
"BPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France"
],
"type": "Organization"
},
"familyName": "Luu",
"givenName": "Doan-Trung",
"id": "sg:person.01210670442.79",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01210670442.79"
],
"type": "Person"
}
],
"citation": [
{
"id": "sg:pub.10.1007/s00709-003-0026-2",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1001813791",
"https://doi.org/10.1007/s00709-003-0026-2"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/pcp/pci172",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1005931501"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/pcp/pcu178",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1006083250"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/mp/ssu052",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1009649272"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/mp/ssu052",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1009649272"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1263/jbb.104.34",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1011120140"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1242/dev.127613",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1013406538"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1046/j.1365-313x.1998.00343.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1013777935"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1399-3054.1962.tb08052.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1023703429"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-313x.2010.04469.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1024395175"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/pcp/pci215",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025696723"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/pcp/pci215",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025696723"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/mp/ssr025",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1027346512"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.molp.2015.02.017",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1029529612"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.molp.2015.02.017",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1029529612"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.97.7.3718",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1034537869"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-002-1184-x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1034890783",
"https://doi.org/10.1007/s00122-002-1184-x"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1023/a:1006496308160",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1041909606",
"https://doi.org/10.1023/a:1006496308160"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1105/tpc.108.061994",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1042113877"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-313x.2011.04841.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047006402"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-313x.2009.04007.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047333535"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-313x.2009.04007.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047333535"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-313x.2008.03594.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047700150"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s12284-008-9016-5",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1050873927",
"https://doi.org/10.1007/s12284-008-9016-5"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s11103-015-0397-8",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1052727295",
"https://doi.org/10.1007/s11103-015-0397-8"
],
"type": "CreativeWork"
}
],
"datePublished": "2018-12",
"datePublishedReg": "2018-12-01",
"description": "BACKGROUND: Cell biology approach using membrane protein markers tagged with fluorescent proteins highlights the dynamic behaviour of plant cell membranes, not only in the standard but also in changing environmental conditions. In the past, this strategy has been extensively developed in plant models such as Arabidopsis.\nRESULTS: Here, we generated a set of transgenic lines expressing membrane protein markers to extend this approach to rice, one of the most cultivated crop in the world and an emerging plant model. Lines expressing individually eight membrane protein markers including five aquaporins (OsPIP1;1, OsPIP2;4, OsPIP2;5, OsTIP1;1, OsTIP2;2) and three endosomal trafficking proteins (OsRab5a, OsGAP1, OsSCAMP1) were obtained. Importantly, we challenged in roots the aquaporin-expressing transgenic lines upon salt and osmotic stress and uncovered a highly dynamic behaviour of cell membrane.\nCONCLUSION: We have uncovered the relocalization and dynamics of plasma membrane aquaporins upon salt and osmotic stresses in rice. Importantly, our data support a model where relocalization of OsPIPs is concomitant with their high cycling dynamics.",
"genre": "research_article",
"id": "sg:pub.10.1186/s12284-018-0209-2",
"inLanguage": [
"en"
],
"isAccessibleForFree": true,
"isFundedItemOf": [
{
"id": "sg:grant.3768174",
"type": "MonetaryGrant"
}
],
"isPartOf": [
{
"id": "sg:journal.1041344",
"issn": [
"1939-8425",
"1939-8433"
],
"name": "Rice",
"type": "Periodical"
},
{
"issueNumber": "1",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "11"
}
],
"name": "Sub-cellular markers highlight intracellular dynamics of membrane proteins in response to abiotic treatments in rice",
"pagination": "23",
"productId": [
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1186/s12284-018-0209-2"
]
},
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1103244250"
]
},
{
"name": "readcube_id",
"type": "PropertyValue",
"value": [
"e83d4503338c232f11abedaff6579c614e3814fd2f815902760551598774a08a"
]
},
{
"name": "nlm_unique_id",
"type": "PropertyValue",
"value": [
"101503136"
]
},
{
"name": "pubmed_id",
"type": "PropertyValue",
"value": [
"29651780"
]
}
],
"sameAs": [
"https://doi.org/10.1186/s12284-018-0209-2",
"https://app.dimensions.ai/details/publication/pub.1103244250"
],
"sdDataset": "articles",
"sdDatePublished": "2019-04-16T06:24",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000377_0000000377/records_106831_00000002.jsonl",
"type": "ScholarlyArticle",
"url": "https://link.springer.com/10.1186%2Fs12284-018-0209-2"
}
]
Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1186/s12284-018-0209-2'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1186/s12284-018-0209-2'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1186/s12284-018-0209-2'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1186/s12284-018-0209-2'
This table displays all metadata directly associated to this object as RDF triples.
234 TRIPLES
21 PREDICATES
50 URIs
21 LITERALS
9 BLANK NODES