A BAC clone fingerprinting approach to the detection of human genome rearrangements View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2007-10

AUTHORS

Martin Krzywinski, Ian Bosdet, Carrie Mathewson, Natasja Wye, Jay Brebner, Readman Chiu, Richard Corbett, Matthew Field, Darlene Lee, Trevor Pugh, Stas Volik, Asim Siddiqui, Steven Jones, Jacquie Schein, Collin Collins, Marco Marra

ABSTRACT

We present a method, called fingerprint profiling (FPP), that uses restriction digest fingerprints of bacterial artificial chromosome clones to detect and classify rearrangements in the human genome. The approach uses alignment of experimental fingerprint patterns to in silico digests of the sequence assembly and is capable of detecting micro-deletions (1-5 kb) and balanced rearrangements. Our method has compelling potential for use as a whole-genome method for the identification and characterization of human genome rearrangements. More... »

PAGES

r224

Identifiers

URI

http://scigraph.springernature.com/pub.10.1186/gb-2007-8-10-r224

DOI

http://dx.doi.org/10.1186/gb-2007-8-10-r224

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1002470859

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/17953769


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