Phylogenetic identification of marine bacteria isolated from deep-sea sediments of the eastern South Atlantic Ocean View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2013-12

AUTHORS

Marcus Adonai Castro da Silva, Angélica Cavalett, Ananda Spinner, Daniele Cristina Rosa, Regina Beltrame Jasper, Maria Carolina Quecine, Maria Letícia Bonatelli, Aline Pizzirani-Kleiner, Gertrudes Corção, André Oliveira de Souza Lima

ABSTRACT

The deep-sea environments of the South Atlantic Ocean are less studied in comparison to the North Atlantic and Pacific Oceans. With the aim of identifying the deep-sea bacteria in this less known ocean, 70 strains were isolated from eight sediment samples (depth range between 1905 to 5560 m) collected in the eastern part of the South Atlantic, from the equatorial region to the Cape Abyssal Plain, using three different culture media. The strains were classified into three phylogenetic groups, Gammaproteobacteria, Firmicutes and Actinobacteria, by the analysis of 16s rRNA gene sequences. Gammaproteobacteria and Firmicutes were the most frequently identified groups, with Halomonas the most frequent genus among the strains. Microorganisms belonging to Firmicutes were the only ones observed in all samples. Sixteen of the 41 identified operational taxonomic units probably represent new species. The presence of potentially new species reinforces the need for new studies in the deep-sea environments of the South Atlantic. More... »

PAGES

127

References to SciGraph publications

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  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1186/2193-1801-2-127

    DOI

    http://dx.doi.org/10.1186/2193-1801-2-127

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1025230558

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/23565357


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