Broadening the horizon – level 2.5 of the HUPO-PSI format for molecular interactions View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2007-10-09

AUTHORS

Samuel Kerrien, Sandra Orchard, Luisa Montecchi-Palazzi, Bruno Aranda, Antony F Quinn, Nisha Vinod, Gary D Bader, Ioannis Xenarios, Jérôme Wojcik, David Sherman, Mike Tyers, John J Salama, Susan Moore, Arnaud Ceol, Andrew Chatr-aryamontri, Matthias Oesterheld, Volker Stümpflen, Lukasz Salwinski, Jason Nerothin, Ethan Cerami, Michael E Cusick, Marc Vidal, Michael Gilson, John Armstrong, Peter Woollard, Christopher Hogue, David Eisenberg, Gianni Cesareni, Rolf Apweiler, Henning Hermjakob

ABSTRACT

Background Molecular interaction Information is a key resource in modern biomedical research. Publicly available data have previously been provided in a broad array of diverse formats, making access to this very difficult. The publication and wide implementation of the Human Proteome Organisation Proteomics Standards Initiative Molecular Interactions (HUPO PSI-MI) format in 2004 was a major step towards the establishment of a single, unified format by which molecular interactions should be presented, but focused purely on protein-protein interactions.Results The HUPO-PSI has further developed the PSI-MI XML schema to enable the description of interactions between a wider range of molecular types, for example nucleic acids, chemical entities, and molecular complexes. Extensive details about each supported molecular interaction can now be captured, including the biological role of each molecule within that interaction, detailed description of interacting domains, and the kinetic parameters of the interaction. The format is supported by data management and analysis tools and has been adopted by major interaction data providers. Additionally, a simpler, tab-delimited format MITAB2.5 has been developed for the benefit of users who require only minimal information in an easy to access configuration.Conclusion The PSI-MI XML2.5 and MITAB2.5 formats have been jointly developed by interaction data producers and providers from both the academic and commercial sector, and are already widely implemented and well supported by an active development community. PSI-MI XML2.5 enables the description of highly detailed molecular interaction data and facilitates data exchange between databases and users without loss of information. MITAB2.5 is a simpler format appropriate for fast Perl parsing or loading into Microsoft Excel. More... »

PAGES

44

Journal

TITLE

BMC Biology

ISSUE

1

VOLUME

5

Identifiers

URI

http://scigraph.springernature.com/pub.10.1186/1741-7007-5-44

DOI

http://dx.doi.org/10.1186/1741-7007-5-44

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1035046201

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/17925023


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Computational Biology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Computer Graphics", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Database Management Systems", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Databases, Protein", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Natural Language Processing", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Protein Interaction Mapping", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Proteomics", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "User-Computer Interface", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK", 
          "id": "http://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Kerrien", 
        "givenName": "Samuel", 
        "id": "sg:person.01250435717.21", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01250435717.21"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK", 
          "id": "http://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Orchard", 
        "givenName": "Sandra", 
        "id": "sg:person.01067522713.08", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01067522713.08"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK", 
          "id": "http://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Montecchi-Palazzi", 
        "givenName": "Luisa", 
        "id": "sg:person.01227317425.65", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01227317425.65"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK", 
          "id": "http://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Aranda", 
        "givenName": "Bruno", 
        "id": "sg:person.01316551117.75", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01316551117.75"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK", 
          "id": "http://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Quinn", 
        "givenName": "Antony F", 
        "id": "sg:person.0657252130.59", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0657252130.59"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK", 
          "id": "http://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Vinod", 
        "givenName": "Nisha", 
        "id": "sg:person.01032266360.14", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01032266360.14"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Samuel Lunenfeld Research Institute, Mount Sinai Hospital, 600 University Avenue, Toronto, Ontario, Canada", 
          "id": "http://www.grid.ac/institutes/grid.250674.2", 
          "name": [
            "Banting & Best Department of Medical Research and Terrence Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, 160 College Street, Toronto, Ontario, Canada", 
            "Samuel Lunenfeld Research Institute, Mount Sinai Hospital, 600 University Avenue, Toronto, Ontario, Canada"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Bader", 
        "givenName": "Gary D", 
        "id": "sg:person.01165014233.23", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01165014233.23"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Merck Serono, 9 chemin des Mines, 1211, Geneva, Switzerland", 
          "id": "http://www.grid.ac/institutes/grid.418389.f", 
          "name": [
            "Merck Serono, 9 chemin des Mines, 1211, Geneva, Switzerland"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Xenarios", 
        "givenName": "Ioannis", 
        "id": "sg:person.01002422346.89", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01002422346.89"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Merck Serono, 9 chemin des Mines, 1211, Geneva, Switzerland", 
          "id": "http://www.grid.ac/institutes/grid.418389.f", 
          "name": [
            "Merck Serono, 9 chemin des Mines, 1211, Geneva, Switzerland"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wojcik", 
        "givenName": "J\u00e9r\u00f4me", 
        "id": "sg:person.01316070510.67", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01316070510.67"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Laboratoire Bordelais de Recherche en Informatique, ENSI \u00c9lectronique, Informatique et Radiocomm. de Bordeaux, France", 
          "id": "http://www.grid.ac/institutes/grid.503269.b", 
          "name": [
            "Laboratoire Bordelais de Recherche en Informatique, ENSI \u00c9lectronique, Informatique et Radiocomm. de Bordeaux, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Sherman", 
        "givenName": "David", 
        "id": "sg:person.01166272524.84", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01166272524.84"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Samuel Lunenfeld Research Institute, Mount Sinai Hospital, 600 University Avenue, Toronto, Ontario, Canada", 
          "id": "http://www.grid.ac/institutes/grid.250674.2", 
          "name": [
            "Samuel Lunenfeld Research Institute, Mount Sinai Hospital, 600 University Avenue, Toronto, Ontario, Canada"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Tyers", 
        "givenName": "Mike", 
        "id": "sg:person.013532143277.00", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013532143277.00"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "The Blueprint Initiative of Mount Sinai Hospital, 600 University Avenue, M5G 1X5, Toronto, ON, Canada", 
          "id": "http://www.grid.ac/institutes/grid.416166.2", 
          "name": [
            "The Blueprint Initiative of Mount Sinai Hospital, 600 University Avenue, M5G 1X5, Toronto, ON, Canada"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Salama", 
        "givenName": "John J", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Office of Life Sciences (OLS), Centre for Life Sciences, National University of Singapore, Singapore", 
          "id": "http://www.grid.ac/institutes/grid.4280.e", 
          "name": [
            "The Blueprint Initiative of Mount Sinai Hospital, 600 University Avenue, M5G 1X5, Toronto, ON, Canada", 
            "Office of Life Sciences (OLS), Centre for Life Sciences, National University of Singapore, Singapore"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Moore", 
        "givenName": "Susan", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy", 
          "id": "http://www.grid.ac/institutes/grid.6530.0", 
          "name": [
            "Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ceol", 
        "givenName": "Arnaud", 
        "id": "sg:person.01076760745.48", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01076760745.48"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy", 
          "id": "http://www.grid.ac/institutes/grid.6530.0", 
          "name": [
            "Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Chatr-aryamontri", 
        "givenName": "Andrew", 
        "id": "sg:person.01130104722.77", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01130104722.77"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute for Bioinformatics, GSF \u2013 National Research Center for Environment and Health, Neuherberg, Germany", 
          "id": "http://www.grid.ac/institutes/grid.4567.0", 
          "name": [
            "Institute for Bioinformatics, GSF \u2013 National Research Center for Environment and Health, Neuherberg, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Oesterheld", 
        "givenName": "Matthias", 
        "id": "sg:person.01112665605.65", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01112665605.65"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute for Bioinformatics, GSF \u2013 National Research Center for Environment and Health, Neuherberg, Germany", 
          "id": "http://www.grid.ac/institutes/grid.4567.0", 
          "name": [
            "Institute for Bioinformatics, GSF \u2013 National Research Center for Environment and Health, Neuherberg, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "St\u00fcmpflen", 
        "givenName": "Volker", 
        "id": "sg:person.01243641750.08", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01243641750.08"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "UCLA-DOE Institute for Genomics & Proteomics, UCLA, LA, USA", 
          "id": "http://www.grid.ac/institutes/grid.19006.3e", 
          "name": [
            "UCLA-DOE Institute for Genomics & Proteomics, UCLA, LA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Salwinski", 
        "givenName": "Lukasz", 
        "id": "sg:person.01215336726.95", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01215336726.95"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "UCLA-DOE Institute for Genomics & Proteomics, UCLA, LA, USA", 
          "id": "http://www.grid.ac/institutes/grid.19006.3e", 
          "name": [
            "UCLA-DOE Institute for Genomics & Proteomics, UCLA, LA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Nerothin", 
        "givenName": "Jason", 
        "id": "sg:person.01332622370.45", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01332622370.45"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Computational Biology Center, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, Box 460, New York, NY, USA", 
          "id": "http://www.grid.ac/institutes/grid.51462.34", 
          "name": [
            "Computational Biology Center, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, Box 460, New York, NY, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Cerami", 
        "givenName": "Ethan", 
        "id": "sg:person.01042660207.57", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01042660207.57"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Center for Cancer Systems Biology (CCSB) and Department of Cancer, Biology, Dana-Farber Cancer Institute, and Department of Genetics, Harvard Medical School, Boston, MA, USA", 
          "id": "http://www.grid.ac/institutes/grid.65499.37", 
          "name": [
            "Center for Cancer Systems Biology (CCSB) and Department of Cancer, Biology, Dana-Farber Cancer Institute, and Department of Genetics, Harvard Medical School, Boston, MA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Cusick", 
        "givenName": "Michael E", 
        "id": "sg:person.01145457125.26", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01145457125.26"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Center for Cancer Systems Biology (CCSB) and Department of Cancer, Biology, Dana-Farber Cancer Institute, and Department of Genetics, Harvard Medical School, Boston, MA, USA", 
          "id": "http://www.grid.ac/institutes/grid.65499.37", 
          "name": [
            "Center for Cancer Systems Biology (CCSB) and Department of Cancer, Biology, Dana-Farber Cancer Institute, and Department of Genetics, Harvard Medical School, Boston, MA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Vidal", 
        "givenName": "Marc", 
        "id": "sg:person.0657302030.33", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0657302030.33"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute, Rockville, MD, USA", 
          "id": "http://www.grid.ac/institutes/grid.164295.d", 
          "name": [
            "Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute, Rockville, MD, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Gilson", 
        "givenName": "Michael", 
        "id": "sg:person.01260151564.08", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01260151564.08"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Glaxo Smithkline Medicines Research Centre, Gunnels Wood Road, Stevenage, Herts, UK", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Glaxo Smithkline Medicines Research Centre, Gunnels Wood Road, Stevenage, Herts, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Armstrong", 
        "givenName": "John", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Glaxo Smithkline Medicines Research Centre, Gunnels Wood Road, Stevenage, Herts, UK", 
          "id": "http://www.grid.ac/institutes/None", 
          "name": [
            "Glaxo Smithkline Medicines Research Centre, Gunnels Wood Road, Stevenage, Herts, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Woollard", 
        "givenName": "Peter", 
        "id": "sg:person.0721461706.21", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0721461706.21"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Dept. of Biochemistry, University of Toronto, Toronto, Ontario, Canada", 
          "id": "http://www.grid.ac/institutes/grid.17063.33", 
          "name": [
            "Dept. of Biochemistry, University of Toronto, Toronto, Ontario, Canada"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hogue", 
        "givenName": "Christopher", 
        "id": "sg:person.01065356734.75", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01065356734.75"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "UCLA-DOE Institute for Genomics & Proteomics, UCLA, LA, USA", 
          "id": "http://www.grid.ac/institutes/grid.19006.3e", 
          "name": [
            "UCLA-DOE Institute for Genomics & Proteomics, UCLA, LA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Eisenberg", 
        "givenName": "David", 
        "id": "sg:person.01261155035.26", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01261155035.26"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy", 
          "id": "http://www.grid.ac/institutes/grid.6530.0", 
          "name": [
            "Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Cesareni", 
        "givenName": "Gianni", 
        "id": "sg:person.0703271022.11", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0703271022.11"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK", 
          "id": "http://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Apweiler", 
        "givenName": "Rolf", 
        "id": "sg:person.01134215603.98", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01134215603.98"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK", 
          "id": "http://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hermjakob", 
        "givenName": "Henning", 
        "id": "sg:person.01070655672.90", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01070655672.90"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1186/1471-2105-7-97", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020507393", 
          "https://doi.org/10.1186/1471-2105-7-97"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nbt1324", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032491066", 
          "https://doi.org/10.1038/nbt1324"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nbt926", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013367542", 
          "https://doi.org/10.1038/nbt926"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2007-10-09", 
    "datePublishedReg": "2007-10-09", 
    "description": "Abstract\nBackground\nMolecular interaction Information is a key resource in modern biomedical research. Publicly available data have previously been provided in a broad array of diverse formats, making access to this very difficult. The publication and wide implementation of the Human Proteome Organisation Proteomics Standards Initiative Molecular Interactions (HUPO PSI-MI) format in 2004 was a major step towards the establishment of a single, unified format by which molecular interactions should be presented, but focused purely on protein-protein interactions.Results\nThe HUPO-PSI has further developed the PSI-MI XML schema to enable the description of interactions between a wider range of molecular types, for example nucleic acids, chemical entities, and molecular complexes. Extensive details about each supported molecular interaction can now be captured, including the biological role of each molecule within that interaction, detailed description of interacting domains, and the kinetic parameters of the interaction. The format is supported by data management and analysis tools and has been adopted by major interaction data providers. Additionally, a simpler, tab-delimited format MITAB2.5 has been developed for the benefit of users who require only minimal information in an easy to access configuration.Conclusion\nThe PSI-MI XML2.5 and MITAB2.5 formats have been jointly developed by interaction data producers and providers from both the academic and commercial sector, and are already widely implemented and well supported by an active development community. PSI-MI XML2.5 enables the description of highly detailed molecular interaction data and facilitates data exchange between databases and users without loss of information. MITAB2.5 is a simpler format appropriate for fast Perl parsing or loading into Microsoft Excel.", 
    "genre": "article", 
    "id": "sg:pub.10.1186/1741-7007-5-44", 
    "isAccessibleForFree": true, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.2518515", 
        "type": "MonetaryGrant"
      }, 
      {
        "id": "sg:grant.2518265", 
        "type": "MonetaryGrant"
      }, 
      {
        "id": "sg:grant.3762696", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1032884", 
        "issn": [
          "1478-5854", 
          "1741-7007"
        ], 
        "name": "BMC Biology", 
        "publisher": "Springer Nature", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "5"
      }
    ], 
    "keywords": [
      "molecular interactions", 
      "example nucleic acids", 
      "molecular complexes", 
      "chemical entities", 
      "nucleic acids", 
      "kinetic parameters", 
      "benefit of users", 
      "tab-delimited format", 
      "molecular interaction data", 
      "protein-protein interactions", 
      "molecular interaction information", 
      "XML schema", 
      "description of interactions", 
      "data management", 
      "data providers", 
      "data exchange", 
      "loss of information", 
      "data producers", 
      "unified format", 
      "diverse formats", 
      "modern biomedical research", 
      "interaction information", 
      "interaction", 
      "HUPO-PSI", 
      "molecules", 
      "interaction data", 
      "analysis tools", 
      "complexes", 
      "development community", 
      "users", 
      "wide range", 
      "format", 
      "molecular types", 
      "interaction formats", 
      "simple format", 
      "biomedical research", 
      "acid", 
      "biological role", 
      "information", 
      "minimal information", 
      "major step", 
      "extensive details", 
      "providers", 
      "Microsoft Excel", 
      "schema", 
      "commercial sector", 
      "Perl", 
      "step", 
      "key resources", 
      "range", 
      "implementation", 
      "broad array", 
      "exchange", 
      "database", 
      "detailed description", 
      "configuration", 
      "resources", 
      "description", 
      "access", 
      "tool", 
      "wider implementation", 
      "data", 
      "array", 
      "Excel", 
      "entities", 
      "detail", 
      "domain", 
      "available data", 
      "parameters", 
      "management", 
      "research", 
      "types", 
      "benefits", 
      "results", 
      "community", 
      "role", 
      "sector", 
      "publications", 
      "loss", 
      "background", 
      "producers", 
      "establishment", 
      "conclusion"
    ], 
    "name": "Broadening the horizon \u2013 level 2.5 of the HUPO-PSI format for molecular interactions", 
    "pagination": "44", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1035046201"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1186/1741-7007-5-44"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "17925023"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1186/1741-7007-5-44", 
      "https://app.dimensions.ai/details/publication/pub.1035046201"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2022-12-01T06:26", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20221201/entities/gbq_results/article/article_447.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1186/1741-7007-5-44"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1186/1741-7007-5-44'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1186/1741-7007-5-44'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1186/1741-7007-5-44'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1186/1741-7007-5-44'


 

This table displays all metadata directly associated to this object as RDF triples.

431 TRIPLES      21 PREDICATES      118 URIs      108 LITERALS      15 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1186/1741-7007-5-44 schema:about N2d43838801394371b5ee85d0f3627c98
2 N5b75cdefef9a4dff95068fb21a9ac893
3 N6d9b1763ff154b26b4de8f2b76a32086
4 N82c516ce9642465ca3dde8d997cd4802
5 Na56528a3bc7c4dd897a4bf27a823a231
6 Ne169472191c64cbd8c9da9524d0c0f07
7 Nede43aa54f2d4c23bf1bbb1e8a2dd434
8 Nf991711519fa49079cabf65341e58528
9 anzsrc-for:06
10 schema:author N6904978850b1469f9bb579e47f30dc08
11 schema:citation sg:pub.10.1038/nbt1324
12 sg:pub.10.1038/nbt926
13 sg:pub.10.1186/1471-2105-7-97
14 schema:datePublished 2007-10-09
15 schema:datePublishedReg 2007-10-09
16 schema:description Abstract Background Molecular interaction Information is a key resource in modern biomedical research. Publicly available data have previously been provided in a broad array of diverse formats, making access to this very difficult. The publication and wide implementation of the Human Proteome Organisation Proteomics Standards Initiative Molecular Interactions (HUPO PSI-MI) format in 2004 was a major step towards the establishment of a single, unified format by which molecular interactions should be presented, but focused purely on protein-protein interactions.Results The HUPO-PSI has further developed the PSI-MI XML schema to enable the description of interactions between a wider range of molecular types, for example nucleic acids, chemical entities, and molecular complexes. Extensive details about each supported molecular interaction can now be captured, including the biological role of each molecule within that interaction, detailed description of interacting domains, and the kinetic parameters of the interaction. The format is supported by data management and analysis tools and has been adopted by major interaction data providers. Additionally, a simpler, tab-delimited format MITAB2.5 has been developed for the benefit of users who require only minimal information in an easy to access configuration.Conclusion The PSI-MI XML2.5 and MITAB2.5 formats have been jointly developed by interaction data producers and providers from both the academic and commercial sector, and are already widely implemented and well supported by an active development community. PSI-MI XML2.5 enables the description of highly detailed molecular interaction data and facilitates data exchange between databases and users without loss of information. MITAB2.5 is a simpler format appropriate for fast Perl parsing or loading into Microsoft Excel.
17 schema:genre article
18 schema:isAccessibleForFree true
19 schema:isPartOf N47138e225d6c492d8e191214ba0b8c7a
20 N6fe78958c28e4e1489f51e20bf0e23e6
21 sg:journal.1032884
22 schema:keywords Excel
23 HUPO-PSI
24 Microsoft Excel
25 Perl
26 XML schema
27 access
28 acid
29 analysis tools
30 array
31 available data
32 background
33 benefit of users
34 benefits
35 biological role
36 biomedical research
37 broad array
38 chemical entities
39 commercial sector
40 community
41 complexes
42 conclusion
43 configuration
44 data
45 data exchange
46 data management
47 data producers
48 data providers
49 database
50 description
51 description of interactions
52 detail
53 detailed description
54 development community
55 diverse formats
56 domain
57 entities
58 establishment
59 example nucleic acids
60 exchange
61 extensive details
62 format
63 implementation
64 information
65 interaction
66 interaction data
67 interaction formats
68 interaction information
69 key resources
70 kinetic parameters
71 loss
72 loss of information
73 major step
74 management
75 minimal information
76 modern biomedical research
77 molecular complexes
78 molecular interaction data
79 molecular interaction information
80 molecular interactions
81 molecular types
82 molecules
83 nucleic acids
84 parameters
85 producers
86 protein-protein interactions
87 providers
88 publications
89 range
90 research
91 resources
92 results
93 role
94 schema
95 sector
96 simple format
97 step
98 tab-delimited format
99 tool
100 types
101 unified format
102 users
103 wide range
104 wider implementation
105 schema:name Broadening the horizon – level 2.5 of the HUPO-PSI format for molecular interactions
106 schema:pagination 44
107 schema:productId N0cd741207938429f94f257df9bb9dbae
108 N944505f132b44b599ffa8d2c17267ce3
109 Nb8ec536203b843aaa8d7a00c6f3bb7a7
110 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035046201
111 https://doi.org/10.1186/1741-7007-5-44
112 schema:sdDatePublished 2022-12-01T06:26
113 schema:sdLicense https://scigraph.springernature.com/explorer/license/
114 schema:sdPublisher Nebb2a70c7ab8422bae9e636d0afc4d59
115 schema:url https://doi.org/10.1186/1741-7007-5-44
116 sgo:license sg:explorer/license/
117 sgo:sdDataset articles
118 rdf:type schema:ScholarlyArticle
119 N04951acebca945e5ac35cfcee2a0ec63 rdf:first sg:person.01130104722.77
120 rdf:rest N56e6efe9102843f9b8c739dbd43b2111
121 N0cd741207938429f94f257df9bb9dbae schema:name dimensions_id
122 schema:value pub.1035046201
123 rdf:type schema:PropertyValue
124 N0f140fedec724c9a9c892ddc3b9df85c schema:affiliation grid-institutes:grid.4280.e
125 schema:familyName Moore
126 schema:givenName Susan
127 rdf:type schema:Person
128 N19181a724bca4c02a1b4f7931dc7cdd1 rdf:first sg:person.01332622370.45
129 rdf:rest Neac2a6912ff14883b1dfdf8168320421
130 N1f7ef59b3a0f4f80bd7099d7d8995123 rdf:first sg:person.01032266360.14
131 rdf:rest N8688d8d7d9854f90a39384ecf8bf5fe7
132 N2d43838801394371b5ee85d0f3627c98 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
133 schema:name Natural Language Processing
134 rdf:type schema:DefinedTerm
135 N3d150088b8074078907e2455c3808e69 rdf:first sg:person.013532143277.00
136 rdf:rest Nc9293818113044159a841030ca31b99d
137 N3dcddeb509fa405bad3eebf26a0ad2cb rdf:first sg:person.0703271022.11
138 rdf:rest Nfb767ff7317b48ba955c3d59aa0ad55d
139 N43e3803923244b1ea4063f63f3521364 rdf:first sg:person.01076760745.48
140 rdf:rest N04951acebca945e5ac35cfcee2a0ec63
141 N47138e225d6c492d8e191214ba0b8c7a schema:volumeNumber 5
142 rdf:type schema:PublicationVolume
143 N500d924f434b4907972ce448276e775c rdf:first sg:person.01065356734.75
144 rdf:rest Nbdd44b2e9f454c8fa19b965bf89a3cb7
145 N56a6c2cf617247fcb9da3b6be6032166 rdf:first sg:person.01067522713.08
146 rdf:rest N717f0eb11ed4466b8022622679e81251
147 N56e6efe9102843f9b8c739dbd43b2111 rdf:first sg:person.01112665605.65
148 rdf:rest N9f81faefc3504f48898e68a0d51515a3
149 N5b75cdefef9a4dff95068fb21a9ac893 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
150 schema:name Protein Interaction Mapping
151 rdf:type schema:DefinedTerm
152 N6904978850b1469f9bb579e47f30dc08 rdf:first sg:person.01250435717.21
153 rdf:rest N56a6c2cf617247fcb9da3b6be6032166
154 N6d3ef19b9dff45b09d8f29dd87f35f50 rdf:first sg:person.01316551117.75
155 rdf:rest Ndf3af0fe37164727b3633aa064b89c8b
156 N6d9b1763ff154b26b4de8f2b76a32086 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
157 schema:name Database Management Systems
158 rdf:type schema:DefinedTerm
159 N6fe78958c28e4e1489f51e20bf0e23e6 schema:issueNumber 1
160 rdf:type schema:PublicationIssue
161 N717f0eb11ed4466b8022622679e81251 rdf:first sg:person.01227317425.65
162 rdf:rest N6d3ef19b9dff45b09d8f29dd87f35f50
163 N783e5b4386fc4d778bd42b619bd7d71a rdf:first sg:person.01145457125.26
164 rdf:rest Ne1504934a1f442658c38fa2dd9ddf0db
165 N82c516ce9642465ca3dde8d997cd4802 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
166 schema:name User-Computer Interface
167 rdf:type schema:DefinedTerm
168 N83d5c0b8b24545fe97a8680c45a3e1cb schema:affiliation grid-institutes:grid.416166.2
169 schema:familyName Salama
170 schema:givenName John J
171 rdf:type schema:Person
172 N8688d8d7d9854f90a39384ecf8bf5fe7 rdf:first sg:person.01165014233.23
173 rdf:rest Nacbcc237d7474cf7b9f6129b7f6cb189
174 N906b28e8ab564974b1cf1f4da0a7170b rdf:first N0f140fedec724c9a9c892ddc3b9df85c
175 rdf:rest N43e3803923244b1ea4063f63f3521364
176 N944505f132b44b599ffa8d2c17267ce3 schema:name doi
177 schema:value 10.1186/1741-7007-5-44
178 rdf:type schema:PropertyValue
179 N9c8462bd6c9242d9b3e9edf185e780c2 rdf:first Nb0fdc47d28254d34b77c59064dbee098
180 rdf:rest Ne6bab8c455aa4352b497a19d10c853d0
181 N9f81faefc3504f48898e68a0d51515a3 rdf:first sg:person.01243641750.08
182 rdf:rest Neab2e256b5d14d31a3c0176aa0d39e59
183 Na56528a3bc7c4dd897a4bf27a823a231 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
184 schema:name Computer Graphics
185 rdf:type schema:DefinedTerm
186 Nacbcc237d7474cf7b9f6129b7f6cb189 rdf:first sg:person.01002422346.89
187 rdf:rest Nb604e2b4498547439c7e1d27901a1adb
188 Nb0fdc47d28254d34b77c59064dbee098 schema:affiliation grid-institutes:None
189 schema:familyName Armstrong
190 schema:givenName John
191 rdf:type schema:Person
192 Nb604e2b4498547439c7e1d27901a1adb rdf:first sg:person.01316070510.67
193 rdf:rest Ne46f91434ce34783abd009b345865be4
194 Nb8ec536203b843aaa8d7a00c6f3bb7a7 schema:name pubmed_id
195 schema:value 17925023
196 rdf:type schema:PropertyValue
197 Nbdd44b2e9f454c8fa19b965bf89a3cb7 rdf:first sg:person.01261155035.26
198 rdf:rest N3dcddeb509fa405bad3eebf26a0ad2cb
199 Nc9293818113044159a841030ca31b99d rdf:first N83d5c0b8b24545fe97a8680c45a3e1cb
200 rdf:rest N906b28e8ab564974b1cf1f4da0a7170b
201 Ndf3af0fe37164727b3633aa064b89c8b rdf:first sg:person.0657252130.59
202 rdf:rest N1f7ef59b3a0f4f80bd7099d7d8995123
203 Ne1504934a1f442658c38fa2dd9ddf0db rdf:first sg:person.0657302030.33
204 rdf:rest Nea5a7f4d4f7747d2b94a744011b3b1a5
205 Ne169472191c64cbd8c9da9524d0c0f07 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
206 schema:name Proteomics
207 rdf:type schema:DefinedTerm
208 Ne46f91434ce34783abd009b345865be4 rdf:first sg:person.01166272524.84
209 rdf:rest N3d150088b8074078907e2455c3808e69
210 Ne6bab8c455aa4352b497a19d10c853d0 rdf:first sg:person.0721461706.21
211 rdf:rest N500d924f434b4907972ce448276e775c
212 Nea5a7f4d4f7747d2b94a744011b3b1a5 rdf:first sg:person.01260151564.08
213 rdf:rest N9c8462bd6c9242d9b3e9edf185e780c2
214 Neab2e256b5d14d31a3c0176aa0d39e59 rdf:first sg:person.01215336726.95
215 rdf:rest N19181a724bca4c02a1b4f7931dc7cdd1
216 Neac2a6912ff14883b1dfdf8168320421 rdf:first sg:person.01042660207.57
217 rdf:rest N783e5b4386fc4d778bd42b619bd7d71a
218 Nebb2a70c7ab8422bae9e636d0afc4d59 schema:name Springer Nature - SN SciGraph project
219 rdf:type schema:Organization
220 Necf36711930744f0811b5fffed80d2c4 rdf:first sg:person.01070655672.90
221 rdf:rest rdf:nil
222 Nede43aa54f2d4c23bf1bbb1e8a2dd434 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
223 schema:name Computational Biology
224 rdf:type schema:DefinedTerm
225 Nf991711519fa49079cabf65341e58528 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
226 schema:name Databases, Protein
227 rdf:type schema:DefinedTerm
228 Nfb767ff7317b48ba955c3d59aa0ad55d rdf:first sg:person.01134215603.98
229 rdf:rest Necf36711930744f0811b5fffed80d2c4
230 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
231 schema:name Biological Sciences
232 rdf:type schema:DefinedTerm
233 sg:grant.2518265 http://pending.schema.org/fundedItem sg:pub.10.1186/1741-7007-5-44
234 rdf:type schema:MonetaryGrant
235 sg:grant.2518515 http://pending.schema.org/fundedItem sg:pub.10.1186/1741-7007-5-44
236 rdf:type schema:MonetaryGrant
237 sg:grant.3762696 http://pending.schema.org/fundedItem sg:pub.10.1186/1741-7007-5-44
238 rdf:type schema:MonetaryGrant
239 sg:journal.1032884 schema:issn 1478-5854
240 1741-7007
241 schema:name BMC Biology
242 schema:publisher Springer Nature
243 rdf:type schema:Periodical
244 sg:person.01002422346.89 schema:affiliation grid-institutes:grid.418389.f
245 schema:familyName Xenarios
246 schema:givenName Ioannis
247 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01002422346.89
248 rdf:type schema:Person
249 sg:person.01032266360.14 schema:affiliation grid-institutes:grid.225360.0
250 schema:familyName Vinod
251 schema:givenName Nisha
252 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01032266360.14
253 rdf:type schema:Person
254 sg:person.01042660207.57 schema:affiliation grid-institutes:grid.51462.34
255 schema:familyName Cerami
256 schema:givenName Ethan
257 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01042660207.57
258 rdf:type schema:Person
259 sg:person.01065356734.75 schema:affiliation grid-institutes:grid.17063.33
260 schema:familyName Hogue
261 schema:givenName Christopher
262 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01065356734.75
263 rdf:type schema:Person
264 sg:person.01067522713.08 schema:affiliation grid-institutes:grid.225360.0
265 schema:familyName Orchard
266 schema:givenName Sandra
267 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01067522713.08
268 rdf:type schema:Person
269 sg:person.01070655672.90 schema:affiliation grid-institutes:grid.225360.0
270 schema:familyName Hermjakob
271 schema:givenName Henning
272 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01070655672.90
273 rdf:type schema:Person
274 sg:person.01076760745.48 schema:affiliation grid-institutes:grid.6530.0
275 schema:familyName Ceol
276 schema:givenName Arnaud
277 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01076760745.48
278 rdf:type schema:Person
279 sg:person.01112665605.65 schema:affiliation grid-institutes:grid.4567.0
280 schema:familyName Oesterheld
281 schema:givenName Matthias
282 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01112665605.65
283 rdf:type schema:Person
284 sg:person.01130104722.77 schema:affiliation grid-institutes:grid.6530.0
285 schema:familyName Chatr-aryamontri
286 schema:givenName Andrew
287 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01130104722.77
288 rdf:type schema:Person
289 sg:person.01134215603.98 schema:affiliation grid-institutes:grid.225360.0
290 schema:familyName Apweiler
291 schema:givenName Rolf
292 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01134215603.98
293 rdf:type schema:Person
294 sg:person.01145457125.26 schema:affiliation grid-institutes:grid.65499.37
295 schema:familyName Cusick
296 schema:givenName Michael E
297 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01145457125.26
298 rdf:type schema:Person
299 sg:person.01165014233.23 schema:affiliation grid-institutes:grid.250674.2
300 schema:familyName Bader
301 schema:givenName Gary D
302 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01165014233.23
303 rdf:type schema:Person
304 sg:person.01166272524.84 schema:affiliation grid-institutes:grid.503269.b
305 schema:familyName Sherman
306 schema:givenName David
307 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01166272524.84
308 rdf:type schema:Person
309 sg:person.01215336726.95 schema:affiliation grid-institutes:grid.19006.3e
310 schema:familyName Salwinski
311 schema:givenName Lukasz
312 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01215336726.95
313 rdf:type schema:Person
314 sg:person.01227317425.65 schema:affiliation grid-institutes:grid.225360.0
315 schema:familyName Montecchi-Palazzi
316 schema:givenName Luisa
317 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01227317425.65
318 rdf:type schema:Person
319 sg:person.01243641750.08 schema:affiliation grid-institutes:grid.4567.0
320 schema:familyName Stümpflen
321 schema:givenName Volker
322 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01243641750.08
323 rdf:type schema:Person
324 sg:person.01250435717.21 schema:affiliation grid-institutes:grid.225360.0
325 schema:familyName Kerrien
326 schema:givenName Samuel
327 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01250435717.21
328 rdf:type schema:Person
329 sg:person.01260151564.08 schema:affiliation grid-institutes:grid.164295.d
330 schema:familyName Gilson
331 schema:givenName Michael
332 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01260151564.08
333 rdf:type schema:Person
334 sg:person.01261155035.26 schema:affiliation grid-institutes:grid.19006.3e
335 schema:familyName Eisenberg
336 schema:givenName David
337 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01261155035.26
338 rdf:type schema:Person
339 sg:person.01316070510.67 schema:affiliation grid-institutes:grid.418389.f
340 schema:familyName Wojcik
341 schema:givenName Jérôme
342 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01316070510.67
343 rdf:type schema:Person
344 sg:person.01316551117.75 schema:affiliation grid-institutes:grid.225360.0
345 schema:familyName Aranda
346 schema:givenName Bruno
347 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01316551117.75
348 rdf:type schema:Person
349 sg:person.01332622370.45 schema:affiliation grid-institutes:grid.19006.3e
350 schema:familyName Nerothin
351 schema:givenName Jason
352 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01332622370.45
353 rdf:type schema:Person
354 sg:person.013532143277.00 schema:affiliation grid-institutes:grid.250674.2
355 schema:familyName Tyers
356 schema:givenName Mike
357 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013532143277.00
358 rdf:type schema:Person
359 sg:person.0657252130.59 schema:affiliation grid-institutes:grid.225360.0
360 schema:familyName Quinn
361 schema:givenName Antony F
362 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0657252130.59
363 rdf:type schema:Person
364 sg:person.0657302030.33 schema:affiliation grid-institutes:grid.65499.37
365 schema:familyName Vidal
366 schema:givenName Marc
367 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0657302030.33
368 rdf:type schema:Person
369 sg:person.0703271022.11 schema:affiliation grid-institutes:grid.6530.0
370 schema:familyName Cesareni
371 schema:givenName Gianni
372 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0703271022.11
373 rdf:type schema:Person
374 sg:person.0721461706.21 schema:affiliation grid-institutes:None
375 schema:familyName Woollard
376 schema:givenName Peter
377 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0721461706.21
378 rdf:type schema:Person
379 sg:pub.10.1038/nbt1324 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032491066
380 https://doi.org/10.1038/nbt1324
381 rdf:type schema:CreativeWork
382 sg:pub.10.1038/nbt926 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013367542
383 https://doi.org/10.1038/nbt926
384 rdf:type schema:CreativeWork
385 sg:pub.10.1186/1471-2105-7-97 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020507393
386 https://doi.org/10.1186/1471-2105-7-97
387 rdf:type schema:CreativeWork
388 grid-institutes:None schema:alternateName Glaxo Smithkline Medicines Research Centre, Gunnels Wood Road, Stevenage, Herts, UK
389 schema:name Glaxo Smithkline Medicines Research Centre, Gunnels Wood Road, Stevenage, Herts, UK
390 rdf:type schema:Organization
391 grid-institutes:grid.164295.d schema:alternateName Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute, Rockville, MD, USA
392 schema:name Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute, Rockville, MD, USA
393 rdf:type schema:Organization
394 grid-institutes:grid.17063.33 schema:alternateName Dept. of Biochemistry, University of Toronto, Toronto, Ontario, Canada
395 schema:name Dept. of Biochemistry, University of Toronto, Toronto, Ontario, Canada
396 rdf:type schema:Organization
397 grid-institutes:grid.19006.3e schema:alternateName UCLA-DOE Institute for Genomics & Proteomics, UCLA, LA, USA
398 schema:name UCLA-DOE Institute for Genomics & Proteomics, UCLA, LA, USA
399 rdf:type schema:Organization
400 grid-institutes:grid.225360.0 schema:alternateName European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
401 schema:name European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
402 rdf:type schema:Organization
403 grid-institutes:grid.250674.2 schema:alternateName Samuel Lunenfeld Research Institute, Mount Sinai Hospital, 600 University Avenue, Toronto, Ontario, Canada
404 schema:name Banting & Best Department of Medical Research and Terrence Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, 160 College Street, Toronto, Ontario, Canada
405 Samuel Lunenfeld Research Institute, Mount Sinai Hospital, 600 University Avenue, Toronto, Ontario, Canada
406 rdf:type schema:Organization
407 grid-institutes:grid.416166.2 schema:alternateName The Blueprint Initiative of Mount Sinai Hospital, 600 University Avenue, M5G 1X5, Toronto, ON, Canada
408 schema:name The Blueprint Initiative of Mount Sinai Hospital, 600 University Avenue, M5G 1X5, Toronto, ON, Canada
409 rdf:type schema:Organization
410 grid-institutes:grid.418389.f schema:alternateName Merck Serono, 9 chemin des Mines, 1211, Geneva, Switzerland
411 schema:name Merck Serono, 9 chemin des Mines, 1211, Geneva, Switzerland
412 rdf:type schema:Organization
413 grid-institutes:grid.4280.e schema:alternateName Office of Life Sciences (OLS), Centre for Life Sciences, National University of Singapore, Singapore
414 schema:name Office of Life Sciences (OLS), Centre for Life Sciences, National University of Singapore, Singapore
415 The Blueprint Initiative of Mount Sinai Hospital, 600 University Avenue, M5G 1X5, Toronto, ON, Canada
416 rdf:type schema:Organization
417 grid-institutes:grid.4567.0 schema:alternateName Institute for Bioinformatics, GSF – National Research Center for Environment and Health, Neuherberg, Germany
418 schema:name Institute for Bioinformatics, GSF – National Research Center for Environment and Health, Neuherberg, Germany
419 rdf:type schema:Organization
420 grid-institutes:grid.503269.b schema:alternateName Laboratoire Bordelais de Recherche en Informatique, ENSI Électronique, Informatique et Radiocomm. de Bordeaux, France
421 schema:name Laboratoire Bordelais de Recherche en Informatique, ENSI Électronique, Informatique et Radiocomm. de Bordeaux, France
422 rdf:type schema:Organization
423 grid-institutes:grid.51462.34 schema:alternateName Computational Biology Center, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, Box 460, New York, NY, USA
424 schema:name Computational Biology Center, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, Box 460, New York, NY, USA
425 rdf:type schema:Organization
426 grid-institutes:grid.6530.0 schema:alternateName Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy
427 schema:name Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, Rome, Italy
428 rdf:type schema:Organization
429 grid-institutes:grid.65499.37 schema:alternateName Center for Cancer Systems Biology (CCSB) and Department of Cancer, Biology, Dana-Farber Cancer Institute, and Department of Genetics, Harvard Medical School, Boston, MA, USA
430 schema:name Center for Cancer Systems Biology (CCSB) and Department of Cancer, Biology, Dana-Farber Cancer Institute, and Department of Genetics, Harvard Medical School, Boston, MA, USA
431 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...