Ontology type: schema:ScholarlyArticle Open Access: True
2010-12
AUTHORSAntonia Busse, Anne Letsch, Carmen Scheibenbogen, Anika Nonnenmacher, Sebastian Ochsenreither, Eckhard Thiel, Ulrich Keilholz
ABSTRACTBACKGROUND: Efficacy of cancer vaccines may be limited due to immune escape mechanisms like loss or mutation of target antigens. Here, we analyzed 10 HLA-A2 positive patients with acute myeloid leukemia (AML) for loss or mutations of the WT1 epitope or epitope flanking sequences that may abolish proper T cell recognition or epitope presentation. METHODS: All patients had been enrolled in a WT1 peptide phase II vaccination trial (NCT00153582) and ultimately progressed despite induction of a WT1 specific T cell response. Blood and bone marrow samples prior to vaccination and during progression were analyzed for mRNA expression level of WT1. Base exchanges within the epitope sequence or flanking regions (10 amino acids N- and C-terminal of the epitope) were assessed with melting point analysis and sequencing. HLA class I expression and WT1 protein expression was analyzed by flow cytometry. RESULTS: Only in one patient, downregulation of WT1 mRNA by 1 log and loss of WT1 detection on protein level at time of disease progression was observed. No mutation leading to a base exchange within the epitope sequence or epitope flanking sequences could be detected in any patient. Further, no loss of HLA class I expression on leukemic blasts was observed. CONCLUSION: Defects in antigen presentation caused by loss or mutation of WT1 or downregulation of HLA molecules are not the major basis for escape from the immune response induced by WT1 peptide vaccination. More... »
PAGES5
http://scigraph.springernature.com/pub.10.1186/1479-5876-8-5
DOIhttp://dx.doi.org/10.1186/1479-5876-8-5
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1016945360
PUBMEDhttps://www.ncbi.nlm.nih.gov/pubmed/20092642
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/1107",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Immunology",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/11",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Medical and Health Sciences",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Antigen Presentation",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Cancer Vaccines",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Clinical Trials, Phase II as Topic",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Disease Progression",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Epitopes",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "HLA-A2 Antigen",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Humans",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Leukemia, Myeloid, Acute",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Mutation",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "T-Lymphocytes",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Tumor Escape",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Vaccines, Subunit",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "WT1 Proteins",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Wilms Tumor",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"name": [
"Department of Medicine III, Charit\u00e9 - CBF, Berlin, Germany"
],
"type": "Organization"
},
"familyName": "Busse",
"givenName": "Antonia",
"id": "sg:person.0643625507.88",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0643625507.88"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Department of Medicine III, Charit\u00e9 - CBF, Berlin, Germany"
],
"type": "Organization"
},
"familyName": "Letsch",
"givenName": "Anne",
"id": "sg:person.0632675710.68",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0632675710.68"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Institute of Medical Immunology, Charit\u00e9 - CCM, Berlin, Germany"
],
"type": "Organization"
},
"familyName": "Scheibenbogen",
"givenName": "Carmen",
"id": "sg:person.0607042220.65",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0607042220.65"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Department of Medicine III, Charit\u00e9 - CBF, Berlin, Germany"
],
"type": "Organization"
},
"familyName": "Nonnenmacher",
"givenName": "Anika",
"id": "sg:person.0677722650.66",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0677722650.66"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Department of Medicine III, Charit\u00e9 - CBF, Berlin, Germany"
],
"type": "Organization"
},
"familyName": "Ochsenreither",
"givenName": "Sebastian",
"id": "sg:person.01277334253.06",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01277334253.06"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Department of Medicine III, Charit\u00e9 - CBF, Berlin, Germany"
],
"type": "Organization"
},
"familyName": "Thiel",
"givenName": "Eckhard",
"id": "sg:person.0616570620.34",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0616570620.34"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Department of Medicine III, Charit\u00e9 - CBF, Berlin, Germany"
],
"type": "Organization"
},
"familyName": "Keilholz",
"givenName": "Ulrich",
"id": "sg:person.01026167307.21",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01026167307.21"
],
"type": "Person"
}
],
"citation": [
{
"id": "sg:pub.10.1038/modpathol.3800588",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1004908017",
"https://doi.org/10.1038/modpathol.3800588"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/modpathol.3800588",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1004908017",
"https://doi.org/10.1038/modpathol.3800588"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf02982574",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1006191278",
"https://doi.org/10.1007/bf02982574"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf02982574",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1006191278",
"https://doi.org/10.1007/bf02982574"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0065-2776(08)60911-6",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1006515864"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.2165/00063030-200519060-00002",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1006795002",
"https://doi.org/10.2165/00063030-200519060-00002"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.2165/00063030-200519060-00002",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1006795002",
"https://doi.org/10.2165/00063030-200519060-00002"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1158/0008-5472.can-06-3960",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1015970808"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1182/blood-2007-08-108241",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1020581663"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0167-5699(00)01692-3",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1022550278"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1097/01.cji.0000199193.29048.56",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1026779967"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1097/01.cji.0000199193.29048.56",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1026779967"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-2567.2007.02587.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1035950510"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-2567.2007.02587.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1035950510"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1002/ijc.21303",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1039989149"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1002/ijc.21303",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1039989149"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00262-006-0183-1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1041326514",
"https://doi.org/10.1007/s00262-006-0183-1"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00262-006-0183-1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1041326514",
"https://doi.org/10.1007/s00262-006-0183-1"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/sj.leu.2404514",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1041733784",
"https://doi.org/10.1038/sj.leu.2404514"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.coi.2008.04.009",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1043519663"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1182/blood-2009-02-202598",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1046404061"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1182/blood-2009-02-202598",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1046404061"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0198-8859(99)00156-1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1049331635"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1002/ijc.11241",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1051274902"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1084/jem.188.6.1017",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1051642646"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s002620050015",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1052325679",
"https://doi.org/10.1007/s002620050015"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1046/j.1365-2141.2003.04622.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1052742494"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1172/jci20985",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1063416578"
],
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1075283509",
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1075518333",
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1082428026",
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1083044390",
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1083238831",
"type": "CreativeWork"
}
],
"datePublished": "2010-12",
"datePublishedReg": "2010-12-01",
"description": "BACKGROUND: Efficacy of cancer vaccines may be limited due to immune escape mechanisms like loss or mutation of target antigens. Here, we analyzed 10 HLA-A2 positive patients with acute myeloid leukemia (AML) for loss or mutations of the WT1 epitope or epitope flanking sequences that may abolish proper T cell recognition or epitope presentation.\nMETHODS: All patients had been enrolled in a WT1 peptide phase II vaccination trial (NCT00153582) and ultimately progressed despite induction of a WT1 specific T cell response. Blood and bone marrow samples prior to vaccination and during progression were analyzed for mRNA expression level of WT1. Base exchanges within the epitope sequence or flanking regions (10 amino acids N- and C-terminal of the epitope) were assessed with melting point analysis and sequencing. HLA class I expression and WT1 protein expression was analyzed by flow cytometry.\nRESULTS: Only in one patient, downregulation of WT1 mRNA by 1 log and loss of WT1 detection on protein level at time of disease progression was observed. No mutation leading to a base exchange within the epitope sequence or epitope flanking sequences could be detected in any patient. Further, no loss of HLA class I expression on leukemic blasts was observed.\nCONCLUSION: Defects in antigen presentation caused by loss or mutation of WT1 or downregulation of HLA molecules are not the major basis for escape from the immune response induced by WT1 peptide vaccination.",
"genre": "research_article",
"id": "sg:pub.10.1186/1479-5876-8-5",
"inLanguage": [
"en"
],
"isAccessibleForFree": true,
"isPartOf": [
{
"id": "sg:journal.1032886",
"issn": [
"1479-5876"
],
"name": "Journal of Translational Medicine",
"type": "Periodical"
},
{
"issueNumber": "1",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "8"
}
],
"name": "Mutation or loss of Wilms' tumor gene 1 (WT1) are not major reasons for immune escape in patients with AML receiving WT1 peptide vaccination",
"pagination": "5",
"productId": [
{
"name": "readcube_id",
"type": "PropertyValue",
"value": [
"50bc58d98b22fda2f97aa1f5dd9d245dbe784a5bca795f8c127239be79b509f8"
]
},
{
"name": "pubmed_id",
"type": "PropertyValue",
"value": [
"20092642"
]
},
{
"name": "nlm_unique_id",
"type": "PropertyValue",
"value": [
"101190741"
]
},
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1186/1479-5876-8-5"
]
},
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1016945360"
]
}
],
"sameAs": [
"https://doi.org/10.1186/1479-5876-8-5",
"https://app.dimensions.ai/details/publication/pub.1016945360"
],
"sdDataset": "articles",
"sdDatePublished": "2019-04-10T13:16",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8659_00000511.jsonl",
"type": "ScholarlyArticle",
"url": "http://link.springer.com/10.1186%2F1479-5876-8-5"
}
]
Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1186/1479-5876-8-5'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1186/1479-5876-8-5'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1186/1479-5876-8-5'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1186/1479-5876-8-5'
This table displays all metadata directly associated to this object as RDF triples.
253 TRIPLES
21 PREDICATES
68 URIs
35 LITERALS
23 BLANK NODES