Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2010-12

AUTHORS

Sandrine Koechler, Jessica Cleiss-Arnold, Caroline Proux, Odile Sismeiro, Marie-Agnès Dillies, Florence Goulhen-Chollet, Florence Hommais, Didier Lièvremont, Florence Arsène-Ploetze, Jean-Yves Coppée, Philippe N Bertin

ABSTRACT

BACKGROUND: Both the speciation and toxicity of arsenic are affected by bacterial transformations, i.e. oxidation, reduction or methylation. These transformations have a major impact on environmental contamination and more particularly on arsenic contamination of drinking water. Herminiimonas arsenicoxydans has been isolated from an arsenic- contaminated environment and has developed various mechanisms for coping with arsenic, including the oxidation of As(III) to As(V) as a detoxification mechanism. RESULTS: In the present study, a differential transcriptome analysis was used to identify genes, including arsenite oxidase encoding genes, involved in the response of H. arsenicoxydans to As(III). To get insight into the molecular mechanisms of this enzyme activity, a Tn5 transposon mutagenesis was performed. Transposon insertions resulting in a lack of arsenite oxidase activity disrupted aoxR and aoxS genes, showing that the aox operon transcription is regulated by the AoxRS two-component system. Remarkably, transposon insertions were also identified in rpoN coding for the alternative N sigma factor (sigma54) of RNA polymerase and in dnaJ coding for the Hsp70 co-chaperone. Western blotting with anti-AoxB antibodies and quantitative RT-PCR experiments allowed us to demonstrate that the rpoN and dnaJ gene products are involved in the control of arsenite oxidase gene expression. Finally, the transcriptional start site of the aoxAB operon was determined using rapid amplification of cDNA ends (RACE) and a putative -12/-24 sigma54-dependent promoter motif was identified upstream of aoxAB coding sequences. CONCLUSION: These results reveal the existence of novel molecular regulatory processes governing arsenite oxidase expression in H. arsenicoxydans. These data are summarized in a model that functionally integrates arsenite oxidation in the adaptive response to As(III) in this microorganism. More... »

PAGES

53

Identifiers

URI

http://scigraph.springernature.com/pub.10.1186/1471-2180-10-53

DOI

http://dx.doi.org/10.1186/1471-2180-10-53

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1011296684

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/20167112


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Amino Acid Sequence", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Arsenites", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Bacterial Proteins", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Base Sequence", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Conserved Sequence", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Gene Expression Profiling", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Gene Expression Regulation, Bacterial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genes, Bacterial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Metabolic Networks and Pathways", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Molecular Sequence Data", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Mutation", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Operon", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Oxalobacteraceae", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Oxidoreductases", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Quorum Sensing", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Sequence Alignment", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Transcription, Genetic", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "University of Strasbourg", 
          "id": "https://www.grid.ac/institutes/grid.11843.3f", 
          "name": [
            "UMR7156 G\u00e9n\u00e9tique Mol\u00e9culaire, G\u00e9nomique et Microbiologie, CNRS Universit\u00e9 de Strasbourg, 28 rue Goethe, 67000, Strasbourg, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Koechler", 
        "givenName": "Sandrine", 
        "id": "sg:person.01224313034.42", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01224313034.42"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Strasbourg", 
          "id": "https://www.grid.ac/institutes/grid.11843.3f", 
          "name": [
            "UMR7156 G\u00e9n\u00e9tique Mol\u00e9culaire, G\u00e9nomique et Microbiologie, CNRS Universit\u00e9 de Strasbourg, 28 rue Goethe, 67000, Strasbourg, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Cleiss-Arnold", 
        "givenName": "Jessica", 
        "id": "sg:person.01042257133.09", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01042257133.09"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institut Pasteur", 
          "id": "https://www.grid.ac/institutes/grid.428999.7", 
          "name": [
            "Plate-forme technologique Puces \u00e0 ADN, Institut Pasteur, 28 rue du Dr. Roux, 75724, Paris cedex 15, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Proux", 
        "givenName": "Caroline", 
        "id": "sg:person.0624326237.64", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0624326237.64"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institut Pasteur", 
          "id": "https://www.grid.ac/institutes/grid.428999.7", 
          "name": [
            "Plate-forme technologique Puces \u00e0 ADN, Institut Pasteur, 28 rue du Dr. Roux, 75724, Paris cedex 15, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Sismeiro", 
        "givenName": "Odile", 
        "id": "sg:person.01162763731.12", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01162763731.12"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institut Pasteur", 
          "id": "https://www.grid.ac/institutes/grid.428999.7", 
          "name": [
            "Plate-forme technologique Puces \u00e0 ADN, Institut Pasteur, 28 rue du Dr. Roux, 75724, Paris cedex 15, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Dillies", 
        "givenName": "Marie-Agn\u00e8s", 
        "id": "sg:person.0737541137.92", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0737541137.92"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Strasbourg", 
          "id": "https://www.grid.ac/institutes/grid.11843.3f", 
          "name": [
            "UMR7156 G\u00e9n\u00e9tique Mol\u00e9culaire, G\u00e9nomique et Microbiologie, CNRS Universit\u00e9 de Strasbourg, 28 rue Goethe, 67000, Strasbourg, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Goulhen-Chollet", 
        "givenName": "Florence", 
        "id": "sg:person.0663263446.23", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0663263446.23"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Claude Bernard University Lyon 1", 
          "id": "https://www.grid.ac/institutes/grid.7849.2", 
          "name": [
            "UMR5240 Microbiologie, Adaptation et Pathog\u00e9nie, CNRS Universit\u00e9 Lyon 1, B\u00e2timent Andr\u00e9 Lwoff, 10 rue Dubois, 69622, Villeurbanne, cedex, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hommais", 
        "givenName": "Florence", 
        "id": "sg:person.01270324137.42", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01270324137.42"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Strasbourg", 
          "id": "https://www.grid.ac/institutes/grid.11843.3f", 
          "name": [
            "UMR7156 G\u00e9n\u00e9tique Mol\u00e9culaire, G\u00e9nomique et Microbiologie, CNRS Universit\u00e9 de Strasbourg, 28 rue Goethe, 67000, Strasbourg, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Li\u00e8vremont", 
        "givenName": "Didier", 
        "id": "sg:person.0731671633.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0731671633.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Strasbourg", 
          "id": "https://www.grid.ac/institutes/grid.11843.3f", 
          "name": [
            "UMR7156 G\u00e9n\u00e9tique Mol\u00e9culaire, G\u00e9nomique et Microbiologie, CNRS Universit\u00e9 de Strasbourg, 28 rue Goethe, 67000, Strasbourg, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ars\u00e8ne-Ploetze", 
        "givenName": "Florence", 
        "id": "sg:person.0667124546.46", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0667124546.46"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institut Pasteur", 
          "id": "https://www.grid.ac/institutes/grid.428999.7", 
          "name": [
            "Plate-forme technologique Puces \u00e0 ADN, Institut Pasteur, 28 rue du Dr. Roux, 75724, Paris cedex 15, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Copp\u00e9e", 
        "givenName": "Jean-Yves", 
        "id": "sg:person.01256360466.46", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01256360466.46"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Strasbourg", 
          "id": "https://www.grid.ac/institutes/grid.11843.3f", 
          "name": [
            "UMR7156 G\u00e9n\u00e9tique Mol\u00e9culaire, G\u00e9nomique et Microbiologie, CNRS Universit\u00e9 de Strasbourg, 28 rue Goethe, 67000, Strasbourg, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Bertin", 
        "givenName": "Philippe N", 
        "id": "sg:person.01162040734.33", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01162040734.33"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1111/j.1365-2958.2007.06005.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002492160"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1046/j.1365-2958.2002.03065.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003288725"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0168-6445(03)00064-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005339942"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jsb.2006.01.006", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005449525"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.02851-07", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006925605"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jmb.2007.01.027", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007263284"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/bti023", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1009138838"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1462-2920.2003.00528.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012217372"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/gb-2002-3-12-research0076", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012981094", 
          "https://doi.org/10.1186/gb-2002-3-12-research0076"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1046/j.1365-2958.2000.01719.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012994438"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pgen.0030053", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014598386"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pgen.0030053", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014598386"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0537525100", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015093142"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.188.3.1081-1088.2006", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016020859"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.186.6.1614-1619.2004", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016032565"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/jmbi.2000.4451", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018390460"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/jmbi.2000.4451", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018390460"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.ge.26.120192.000443", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021083262"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.biochi.2008.07.013", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022755690"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1074/jbc.m608715200", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023588532"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.00336-09", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024457287"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s002030050508", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025611281", 
          "https://doi.org/10.1007/s002030050508"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0147-6513(03)00051-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026206171"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0147-6513(03)00051-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026206171"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkj406", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027030029"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.185.1.135-141.2003", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028477279"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00253-009-1929-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029135529", 
          "https://doi.org/10.1007/s00253-009-1929-4"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00253-009-1929-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029135529", 
          "https://doi.org/10.1007/s00253-009-1929-4"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00253-009-1929-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029135529", 
          "https://doi.org/10.1007/s00253-009-1929-4"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/381571a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029280955", 
          "https://doi.org/10.1038/381571a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/29.9.e45", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030834024"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0969-2126(01)00566-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035544710"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1214/aos/1013699998", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036427477"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1834315100", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038350561"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.molcel.2008.09.016", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038549278"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.biochi.2005.11.004", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039230109"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.185.6.1757-1767.2003", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039696899"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.01038-09", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041734076"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1046-2023(03)00155-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042013441"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1046-2023(03)00155-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042013441"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1046-2023(03)00155-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042013441"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0014-5793(02)03186-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1047691530"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.bbagen.2007.04.004", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1048400233"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/30.9.e36", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049412343"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/27.22.4305", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052071919"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/ijs.0.64308-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060387211"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/mic.0.26031-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060396607"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/mic.0.26060-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060396615"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1105932", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062451278"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.172.11.6568-6572.1990", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062718484"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.177.18.5294-5302.1995", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062724121"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1289/ehp.113-a378", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1064739567"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1074270774", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1074708532", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1075630118", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1077118906", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1077613841", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1079212565", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1083251747", 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2010-12", 
    "datePublishedReg": "2010-12-01", 
    "description": "BACKGROUND: Both the speciation and toxicity of arsenic are affected by bacterial transformations, i.e. oxidation, reduction or methylation. These transformations have a major impact on environmental contamination and more particularly on arsenic contamination of drinking water. Herminiimonas arsenicoxydans has been isolated from an arsenic- contaminated environment and has developed various mechanisms for coping with arsenic, including the oxidation of As(III) to As(V) as a detoxification mechanism.\nRESULTS: In the present study, a differential transcriptome analysis was used to identify genes, including arsenite oxidase encoding genes, involved in the response of H. arsenicoxydans to As(III). To get insight into the molecular mechanisms of this enzyme activity, a Tn5 transposon mutagenesis was performed. Transposon insertions resulting in a lack of arsenite oxidase activity disrupted aoxR and aoxS genes, showing that the aox operon transcription is regulated by the AoxRS two-component system. Remarkably, transposon insertions were also identified in rpoN coding for the alternative N sigma factor (sigma54) of RNA polymerase and in dnaJ coding for the Hsp70 co-chaperone. Western blotting with anti-AoxB antibodies and quantitative RT-PCR experiments allowed us to demonstrate that the rpoN and dnaJ gene products are involved in the control of arsenite oxidase gene expression. Finally, the transcriptional start site of the aoxAB operon was determined using rapid amplification of cDNA ends (RACE) and a putative -12/-24 sigma54-dependent promoter motif was identified upstream of aoxAB coding sequences.\nCONCLUSION: These results reveal the existence of novel molecular regulatory processes governing arsenite oxidase expression in H. arsenicoxydans. These data are summarized in a model that functionally integrates arsenite oxidation in the adaptive response to As(III) in this microorganism.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1186/1471-2180-10-53", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": true, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.4525776", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1024253", 
        "issn": [
          "1471-2180"
        ], 
        "name": "BMC Microbiology", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "10"
      }
    ], 
    "name": "Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans", 
    "pagination": "53", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "35d275a1ef5af4f50b97431a9fd9cf4244e5c526d9621e9d9fa90da9e601434d"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "20167112"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "100966981"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1186/1471-2180-10-53"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1011296684"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1186/1471-2180-10-53", 
      "https://app.dimensions.ai/details/publication/pub.1011296684"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T21:35", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8687_00000504.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1186%2F1471-2180-10-53"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1186/1471-2180-10-53'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1186/1471-2180-10-53'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1186/1471-2180-10-53'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1186/1471-2180-10-53'


 

This table displays all metadata directly associated to this object as RDF triples.

367 TRIPLES      21 PREDICATES      98 URIs      38 LITERALS      26 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1186/1471-2180-10-53 schema:about N29f2a03de3514a7ca30e21a94c7ce759
2 N2eb450e6621c4d368feadc2b4f7b7842
3 N49331e18e7d64685a9dc3b2debb0040b
4 N4fdde80e7a314482b4662d9a622824f0
5 N62a8b744f53f47ea814f60aa0c730b96
6 N687bb183bf914080821bdf68950dd544
7 N695bd5c471ee42bc8422758496f6cde1
8 N70771894f2f9403b839c788685893fdb
9 N793c12ca866a48499db3ccfc90bd0e10
10 N931592d8f4fb44eb8e4f409097945146
11 Na38a8b6b9a6949328c4c9e05995434f6
12 Nab346a8e3b7e46029e8b7d7436bbd1a2
13 Nc141597a4adc467c8a5fe28fff2906cc
14 Nd92354010ee1407eae745accace0b7cc
15 Nddbcbce1ae9f4f3e82e8e8a545a572dc
16 Ndf62ca9282394f8ba9d2c2f9c1af5244
17 Neffc3879060247438591191349f1d9f4
18 anzsrc-for:06
19 anzsrc-for:0604
20 schema:author N6a15f753909f44f5882aeca5b9539407
21 schema:citation sg:pub.10.1007/s002030050508
22 sg:pub.10.1007/s00253-009-1929-4
23 sg:pub.10.1038/381571a0
24 sg:pub.10.1186/gb-2002-3-12-research0076
25 https://app.dimensions.ai/details/publication/pub.1074270774
26 https://app.dimensions.ai/details/publication/pub.1074708532
27 https://app.dimensions.ai/details/publication/pub.1075630118
28 https://app.dimensions.ai/details/publication/pub.1077118906
29 https://app.dimensions.ai/details/publication/pub.1077613841
30 https://app.dimensions.ai/details/publication/pub.1079212565
31 https://app.dimensions.ai/details/publication/pub.1083251747
32 https://doi.org/10.1006/jmbi.2000.4451
33 https://doi.org/10.1016/j.bbagen.2007.04.004
34 https://doi.org/10.1016/j.biochi.2005.11.004
35 https://doi.org/10.1016/j.biochi.2008.07.013
36 https://doi.org/10.1016/j.jmb.2007.01.027
37 https://doi.org/10.1016/j.jsb.2006.01.006
38 https://doi.org/10.1016/j.molcel.2008.09.016
39 https://doi.org/10.1016/s0014-5793(02)03186-1
40 https://doi.org/10.1016/s0147-6513(03)00051-4
41 https://doi.org/10.1016/s0168-6445(03)00064-0
42 https://doi.org/10.1016/s0969-2126(01)00566-4
43 https://doi.org/10.1016/s1046-2023(03)00155-5
44 https://doi.org/10.1046/j.1365-2958.2000.01719.x
45 https://doi.org/10.1046/j.1365-2958.2002.03065.x
46 https://doi.org/10.1073/pnas.0537525100
47 https://doi.org/10.1073/pnas.1834315100
48 https://doi.org/10.1074/jbc.m608715200
49 https://doi.org/10.1093/bioinformatics/bti023
50 https://doi.org/10.1093/nar/27.22.4305
51 https://doi.org/10.1093/nar/29.9.e45
52 https://doi.org/10.1093/nar/30.9.e36
53 https://doi.org/10.1093/nar/gkj406
54 https://doi.org/10.1099/ijs.0.64308-0
55 https://doi.org/10.1099/mic.0.26031-0
56 https://doi.org/10.1099/mic.0.26060-0
57 https://doi.org/10.1111/j.1365-2958.2007.06005.x
58 https://doi.org/10.1111/j.1462-2920.2003.00528.x
59 https://doi.org/10.1126/science.1105932
60 https://doi.org/10.1128/aem.00336-09
61 https://doi.org/10.1128/aem.02851-07
62 https://doi.org/10.1128/jb.01038-09
63 https://doi.org/10.1128/jb.172.11.6568-6572.1990
64 https://doi.org/10.1128/jb.177.18.5294-5302.1995
65 https://doi.org/10.1128/jb.185.1.135-141.2003
66 https://doi.org/10.1128/jb.185.6.1757-1767.2003
67 https://doi.org/10.1128/jb.186.6.1614-1619.2004
68 https://doi.org/10.1128/jb.188.3.1081-1088.2006
69 https://doi.org/10.1146/annurev.ge.26.120192.000443
70 https://doi.org/10.1214/aos/1013699998
71 https://doi.org/10.1289/ehp.113-a378
72 https://doi.org/10.1371/journal.pgen.0030053
73 schema:datePublished 2010-12
74 schema:datePublishedReg 2010-12-01
75 schema:description BACKGROUND: Both the speciation and toxicity of arsenic are affected by bacterial transformations, i.e. oxidation, reduction or methylation. These transformations have a major impact on environmental contamination and more particularly on arsenic contamination of drinking water. Herminiimonas arsenicoxydans has been isolated from an arsenic- contaminated environment and has developed various mechanisms for coping with arsenic, including the oxidation of As(III) to As(V) as a detoxification mechanism. RESULTS: In the present study, a differential transcriptome analysis was used to identify genes, including arsenite oxidase encoding genes, involved in the response of H. arsenicoxydans to As(III). To get insight into the molecular mechanisms of this enzyme activity, a Tn5 transposon mutagenesis was performed. Transposon insertions resulting in a lack of arsenite oxidase activity disrupted aoxR and aoxS genes, showing that the aox operon transcription is regulated by the AoxRS two-component system. Remarkably, transposon insertions were also identified in rpoN coding for the alternative N sigma factor (sigma54) of RNA polymerase and in dnaJ coding for the Hsp70 co-chaperone. Western blotting with anti-AoxB antibodies and quantitative RT-PCR experiments allowed us to demonstrate that the rpoN and dnaJ gene products are involved in the control of arsenite oxidase gene expression. Finally, the transcriptional start site of the aoxAB operon was determined using rapid amplification of cDNA ends (RACE) and a putative -12/-24 sigma54-dependent promoter motif was identified upstream of aoxAB coding sequences. CONCLUSION: These results reveal the existence of novel molecular regulatory processes governing arsenite oxidase expression in H. arsenicoxydans. These data are summarized in a model that functionally integrates arsenite oxidation in the adaptive response to As(III) in this microorganism.
76 schema:genre research_article
77 schema:inLanguage en
78 schema:isAccessibleForFree true
79 schema:isPartOf N79a30f87621f4b05b95fe3f7a5a39835
80 Ne8ee9a0cf7c4435683a8a8abb74f381a
81 sg:journal.1024253
82 schema:name Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans
83 schema:pagination 53
84 schema:productId N2de8e6eaf2614268aaae9f3a069985a3
85 N6bd8205f6e45481bbef428d0bee358e8
86 N80a6cb4c018a431e98d230ad1170523e
87 Na57078fd32554202be94e3f63da00699
88 Ne1c46a7346a24388a35b0c701b59d465
89 schema:sameAs https://app.dimensions.ai/details/publication/pub.1011296684
90 https://doi.org/10.1186/1471-2180-10-53
91 schema:sdDatePublished 2019-04-10T21:35
92 schema:sdLicense https://scigraph.springernature.com/explorer/license/
93 schema:sdPublisher N354f8eacd96e4c2296580921a1c6db32
94 schema:url http://link.springer.com/10.1186%2F1471-2180-10-53
95 sgo:license sg:explorer/license/
96 sgo:sdDataset articles
97 rdf:type schema:ScholarlyArticle
98 N17260a9e403746cfbf48cb1ff95ac4aa rdf:first sg:person.01162040734.33
99 rdf:rest rdf:nil
100 N218d11538c614d569157918aff8b7121 rdf:first sg:person.0663263446.23
101 rdf:rest Nc371caacb58f4274a9430f2c19a73f64
102 N29f2a03de3514a7ca30e21a94c7ce759 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
103 schema:name Quorum Sensing
104 rdf:type schema:DefinedTerm
105 N2de8e6eaf2614268aaae9f3a069985a3 schema:name doi
106 schema:value 10.1186/1471-2180-10-53
107 rdf:type schema:PropertyValue
108 N2eb450e6621c4d368feadc2b4f7b7842 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
109 schema:name Sequence Alignment
110 rdf:type schema:DefinedTerm
111 N354f8eacd96e4c2296580921a1c6db32 schema:name Springer Nature - SN SciGraph project
112 rdf:type schema:Organization
113 N49331e18e7d64685a9dc3b2debb0040b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
114 schema:name Gene Expression Regulation, Bacterial
115 rdf:type schema:DefinedTerm
116 N4d2178f9634d445098afc5c89605567f rdf:first sg:person.0624326237.64
117 rdf:rest N51e91d4730da456e9ae0a3bf51379f0f
118 N4fdde80e7a314482b4662d9a622824f0 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
119 schema:name Gene Expression Profiling
120 rdf:type schema:DefinedTerm
121 N5191e1a28f8a4dd48241bb5ca73e2c67 rdf:first sg:person.0737541137.92
122 rdf:rest N218d11538c614d569157918aff8b7121
123 N51e91d4730da456e9ae0a3bf51379f0f rdf:first sg:person.01162763731.12
124 rdf:rest N5191e1a28f8a4dd48241bb5ca73e2c67
125 N62a8b744f53f47ea814f60aa0c730b96 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
126 schema:name Transcription, Genetic
127 rdf:type schema:DefinedTerm
128 N687bb183bf914080821bdf68950dd544 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
129 schema:name Amino Acid Sequence
130 rdf:type schema:DefinedTerm
131 N695bd5c471ee42bc8422758496f6cde1 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
132 schema:name Genes, Bacterial
133 rdf:type schema:DefinedTerm
134 N6a15f753909f44f5882aeca5b9539407 rdf:first sg:person.01224313034.42
135 rdf:rest N940af6bf05d24ff6ab5cd82071562255
136 N6bd8205f6e45481bbef428d0bee358e8 schema:name nlm_unique_id
137 schema:value 100966981
138 rdf:type schema:PropertyValue
139 N70771894f2f9403b839c788685893fdb schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
140 schema:name Operon
141 rdf:type schema:DefinedTerm
142 N793c12ca866a48499db3ccfc90bd0e10 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
143 schema:name Oxalobacteraceae
144 rdf:type schema:DefinedTerm
145 N79a30f87621f4b05b95fe3f7a5a39835 schema:volumeNumber 10
146 rdf:type schema:PublicationVolume
147 N80a6cb4c018a431e98d230ad1170523e schema:name pubmed_id
148 schema:value 20167112
149 rdf:type schema:PropertyValue
150 N92906afa6a14432ab94f88ac958434e3 rdf:first sg:person.01256360466.46
151 rdf:rest N17260a9e403746cfbf48cb1ff95ac4aa
152 N931592d8f4fb44eb8e4f409097945146 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
153 schema:name Conserved Sequence
154 rdf:type schema:DefinedTerm
155 N940af6bf05d24ff6ab5cd82071562255 rdf:first sg:person.01042257133.09
156 rdf:rest N4d2178f9634d445098afc5c89605567f
157 Na38a8b6b9a6949328c4c9e05995434f6 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
158 schema:name Base Sequence
159 rdf:type schema:DefinedTerm
160 Na57078fd32554202be94e3f63da00699 schema:name readcube_id
161 schema:value 35d275a1ef5af4f50b97431a9fd9cf4244e5c526d9621e9d9fa90da9e601434d
162 rdf:type schema:PropertyValue
163 Nab346a8e3b7e46029e8b7d7436bbd1a2 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
164 schema:name Bacterial Proteins
165 rdf:type schema:DefinedTerm
166 Nc141597a4adc467c8a5fe28fff2906cc schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
167 schema:name Oxidoreductases
168 rdf:type schema:DefinedTerm
169 Nc371caacb58f4274a9430f2c19a73f64 rdf:first sg:person.01270324137.42
170 rdf:rest Ne116c85b766942c68050acff8beae4df
171 Nc9df720a257c4083a0b667e34902c306 rdf:first sg:person.0667124546.46
172 rdf:rest N92906afa6a14432ab94f88ac958434e3
173 Nd92354010ee1407eae745accace0b7cc schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
174 schema:name Mutation
175 rdf:type schema:DefinedTerm
176 Nddbcbce1ae9f4f3e82e8e8a545a572dc schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
177 schema:name Metabolic Networks and Pathways
178 rdf:type schema:DefinedTerm
179 Ndf62ca9282394f8ba9d2c2f9c1af5244 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
180 schema:name Molecular Sequence Data
181 rdf:type schema:DefinedTerm
182 Ne116c85b766942c68050acff8beae4df rdf:first sg:person.0731671633.04
183 rdf:rest Nc9df720a257c4083a0b667e34902c306
184 Ne1c46a7346a24388a35b0c701b59d465 schema:name dimensions_id
185 schema:value pub.1011296684
186 rdf:type schema:PropertyValue
187 Ne8ee9a0cf7c4435683a8a8abb74f381a schema:issueNumber 1
188 rdf:type schema:PublicationIssue
189 Neffc3879060247438591191349f1d9f4 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
190 schema:name Arsenites
191 rdf:type schema:DefinedTerm
192 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
193 schema:name Biological Sciences
194 rdf:type schema:DefinedTerm
195 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
196 schema:name Genetics
197 rdf:type schema:DefinedTerm
198 sg:grant.4525776 http://pending.schema.org/fundedItem sg:pub.10.1186/1471-2180-10-53
199 rdf:type schema:MonetaryGrant
200 sg:journal.1024253 schema:issn 1471-2180
201 schema:name BMC Microbiology
202 rdf:type schema:Periodical
203 sg:person.01042257133.09 schema:affiliation https://www.grid.ac/institutes/grid.11843.3f
204 schema:familyName Cleiss-Arnold
205 schema:givenName Jessica
206 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01042257133.09
207 rdf:type schema:Person
208 sg:person.01162040734.33 schema:affiliation https://www.grid.ac/institutes/grid.11843.3f
209 schema:familyName Bertin
210 schema:givenName Philippe N
211 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01162040734.33
212 rdf:type schema:Person
213 sg:person.01162763731.12 schema:affiliation https://www.grid.ac/institutes/grid.428999.7
214 schema:familyName Sismeiro
215 schema:givenName Odile
216 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01162763731.12
217 rdf:type schema:Person
218 sg:person.01224313034.42 schema:affiliation https://www.grid.ac/institutes/grid.11843.3f
219 schema:familyName Koechler
220 schema:givenName Sandrine
221 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01224313034.42
222 rdf:type schema:Person
223 sg:person.01256360466.46 schema:affiliation https://www.grid.ac/institutes/grid.428999.7
224 schema:familyName Coppée
225 schema:givenName Jean-Yves
226 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01256360466.46
227 rdf:type schema:Person
228 sg:person.01270324137.42 schema:affiliation https://www.grid.ac/institutes/grid.7849.2
229 schema:familyName Hommais
230 schema:givenName Florence
231 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01270324137.42
232 rdf:type schema:Person
233 sg:person.0624326237.64 schema:affiliation https://www.grid.ac/institutes/grid.428999.7
234 schema:familyName Proux
235 schema:givenName Caroline
236 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0624326237.64
237 rdf:type schema:Person
238 sg:person.0663263446.23 schema:affiliation https://www.grid.ac/institutes/grid.11843.3f
239 schema:familyName Goulhen-Chollet
240 schema:givenName Florence
241 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0663263446.23
242 rdf:type schema:Person
243 sg:person.0667124546.46 schema:affiliation https://www.grid.ac/institutes/grid.11843.3f
244 schema:familyName Arsène-Ploetze
245 schema:givenName Florence
246 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0667124546.46
247 rdf:type schema:Person
248 sg:person.0731671633.04 schema:affiliation https://www.grid.ac/institutes/grid.11843.3f
249 schema:familyName Lièvremont
250 schema:givenName Didier
251 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0731671633.04
252 rdf:type schema:Person
253 sg:person.0737541137.92 schema:affiliation https://www.grid.ac/institutes/grid.428999.7
254 schema:familyName Dillies
255 schema:givenName Marie-Agnès
256 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0737541137.92
257 rdf:type schema:Person
258 sg:pub.10.1007/s002030050508 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025611281
259 https://doi.org/10.1007/s002030050508
260 rdf:type schema:CreativeWork
261 sg:pub.10.1007/s00253-009-1929-4 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029135529
262 https://doi.org/10.1007/s00253-009-1929-4
263 rdf:type schema:CreativeWork
264 sg:pub.10.1038/381571a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029280955
265 https://doi.org/10.1038/381571a0
266 rdf:type schema:CreativeWork
267 sg:pub.10.1186/gb-2002-3-12-research0076 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012981094
268 https://doi.org/10.1186/gb-2002-3-12-research0076
269 rdf:type schema:CreativeWork
270 https://app.dimensions.ai/details/publication/pub.1074270774 schema:CreativeWork
271 https://app.dimensions.ai/details/publication/pub.1074708532 schema:CreativeWork
272 https://app.dimensions.ai/details/publication/pub.1075630118 schema:CreativeWork
273 https://app.dimensions.ai/details/publication/pub.1077118906 schema:CreativeWork
274 https://app.dimensions.ai/details/publication/pub.1077613841 schema:CreativeWork
275 https://app.dimensions.ai/details/publication/pub.1079212565 schema:CreativeWork
276 https://app.dimensions.ai/details/publication/pub.1083251747 schema:CreativeWork
277 https://doi.org/10.1006/jmbi.2000.4451 schema:sameAs https://app.dimensions.ai/details/publication/pub.1018390460
278 rdf:type schema:CreativeWork
279 https://doi.org/10.1016/j.bbagen.2007.04.004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1048400233
280 rdf:type schema:CreativeWork
281 https://doi.org/10.1016/j.biochi.2005.11.004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039230109
282 rdf:type schema:CreativeWork
283 https://doi.org/10.1016/j.biochi.2008.07.013 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022755690
284 rdf:type schema:CreativeWork
285 https://doi.org/10.1016/j.jmb.2007.01.027 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007263284
286 rdf:type schema:CreativeWork
287 https://doi.org/10.1016/j.jsb.2006.01.006 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005449525
288 rdf:type schema:CreativeWork
289 https://doi.org/10.1016/j.molcel.2008.09.016 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038549278
290 rdf:type schema:CreativeWork
291 https://doi.org/10.1016/s0014-5793(02)03186-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047691530
292 rdf:type schema:CreativeWork
293 https://doi.org/10.1016/s0147-6513(03)00051-4 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026206171
294 rdf:type schema:CreativeWork
295 https://doi.org/10.1016/s0168-6445(03)00064-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005339942
296 rdf:type schema:CreativeWork
297 https://doi.org/10.1016/s0969-2126(01)00566-4 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035544710
298 rdf:type schema:CreativeWork
299 https://doi.org/10.1016/s1046-2023(03)00155-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042013441
300 rdf:type schema:CreativeWork
301 https://doi.org/10.1046/j.1365-2958.2000.01719.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1012994438
302 rdf:type schema:CreativeWork
303 https://doi.org/10.1046/j.1365-2958.2002.03065.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1003288725
304 rdf:type schema:CreativeWork
305 https://doi.org/10.1073/pnas.0537525100 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015093142
306 rdf:type schema:CreativeWork
307 https://doi.org/10.1073/pnas.1834315100 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038350561
308 rdf:type schema:CreativeWork
309 https://doi.org/10.1074/jbc.m608715200 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023588532
310 rdf:type schema:CreativeWork
311 https://doi.org/10.1093/bioinformatics/bti023 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009138838
312 rdf:type schema:CreativeWork
313 https://doi.org/10.1093/nar/27.22.4305 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052071919
314 rdf:type schema:CreativeWork
315 https://doi.org/10.1093/nar/29.9.e45 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030834024
316 rdf:type schema:CreativeWork
317 https://doi.org/10.1093/nar/30.9.e36 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049412343
318 rdf:type schema:CreativeWork
319 https://doi.org/10.1093/nar/gkj406 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027030029
320 rdf:type schema:CreativeWork
321 https://doi.org/10.1099/ijs.0.64308-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060387211
322 rdf:type schema:CreativeWork
323 https://doi.org/10.1099/mic.0.26031-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060396607
324 rdf:type schema:CreativeWork
325 https://doi.org/10.1099/mic.0.26060-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060396615
326 rdf:type schema:CreativeWork
327 https://doi.org/10.1111/j.1365-2958.2007.06005.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1002492160
328 rdf:type schema:CreativeWork
329 https://doi.org/10.1111/j.1462-2920.2003.00528.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1012217372
330 rdf:type schema:CreativeWork
331 https://doi.org/10.1126/science.1105932 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062451278
332 rdf:type schema:CreativeWork
333 https://doi.org/10.1128/aem.00336-09 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024457287
334 rdf:type schema:CreativeWork
335 https://doi.org/10.1128/aem.02851-07 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006925605
336 rdf:type schema:CreativeWork
337 https://doi.org/10.1128/jb.01038-09 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041734076
338 rdf:type schema:CreativeWork
339 https://doi.org/10.1128/jb.172.11.6568-6572.1990 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062718484
340 rdf:type schema:CreativeWork
341 https://doi.org/10.1128/jb.177.18.5294-5302.1995 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062724121
342 rdf:type schema:CreativeWork
343 https://doi.org/10.1128/jb.185.1.135-141.2003 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028477279
344 rdf:type schema:CreativeWork
345 https://doi.org/10.1128/jb.185.6.1757-1767.2003 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039696899
346 rdf:type schema:CreativeWork
347 https://doi.org/10.1128/jb.186.6.1614-1619.2004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1016032565
348 rdf:type schema:CreativeWork
349 https://doi.org/10.1128/jb.188.3.1081-1088.2006 schema:sameAs https://app.dimensions.ai/details/publication/pub.1016020859
350 rdf:type schema:CreativeWork
351 https://doi.org/10.1146/annurev.ge.26.120192.000443 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021083262
352 rdf:type schema:CreativeWork
353 https://doi.org/10.1214/aos/1013699998 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036427477
354 rdf:type schema:CreativeWork
355 https://doi.org/10.1289/ehp.113-a378 schema:sameAs https://app.dimensions.ai/details/publication/pub.1064739567
356 rdf:type schema:CreativeWork
357 https://doi.org/10.1371/journal.pgen.0030053 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014598386
358 rdf:type schema:CreativeWork
359 https://www.grid.ac/institutes/grid.11843.3f schema:alternateName University of Strasbourg
360 schema:name UMR7156 Génétique Moléculaire, Génomique et Microbiologie, CNRS Université de Strasbourg, 28 rue Goethe, 67000, Strasbourg, France
361 rdf:type schema:Organization
362 https://www.grid.ac/institutes/grid.428999.7 schema:alternateName Institut Pasteur
363 schema:name Plate-forme technologique Puces à ADN, Institut Pasteur, 28 rue du Dr. Roux, 75724, Paris cedex 15, France
364 rdf:type schema:Organization
365 https://www.grid.ac/institutes/grid.7849.2 schema:alternateName Claude Bernard University Lyon 1
366 schema:name UMR5240 Microbiologie, Adaptation et Pathogénie, CNRS Université Lyon 1, Bâtiment André Lwoff, 10 rue Dubois, 69622, Villeurbanne, cedex, France
367 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...