The polyphenol oxidase gene family in land plants: Lineage-specific duplication and expansion View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2012-12

AUTHORS

Lan T Tran, John S Taylor, C Peter Constabel

ABSTRACT

BACKGROUND: Plant polyphenol oxidases (PPOs) are enzymes that typically use molecular oxygen to oxidize ortho-diphenols to ortho-quinones. These commonly cause browning reactions following tissue damage, and may be important in plant defense. Some PPOs function as hydroxylases or in cross-linking reactions, but in most plants their physiological roles are not known. To better understand the importance of PPOs in the plant kingdom, we surveyed PPO gene families in 25 sequenced genomes from chlorophytes, bryophytes, lycophytes, and flowering plants. The PPO genes were then analyzed in silico for gene structure, phylogenetic relationships, and targeting signals. RESULTS: Many previously uncharacterized PPO genes were uncovered. The moss, Physcomitrella patens, contained 13 PPO genes and Selaginella moellendorffii (spike moss) and Glycine max (soybean) each had 11 genes. Populus trichocarpa (poplar) contained a highly diversified gene family with 11 PPO genes, but several flowering plants had only a single PPO gene. By contrast, no PPO-like sequences were identified in several chlorophyte (green algae) genomes or Arabidopsis (A. lyrata and A. thaliana). We found that many PPOs contained one or two introns often near the 3' terminus. Furthermore, N-terminal amino acid sequence analysis using ChloroP and TargetP 1.1 predicted that several putative PPOs are synthesized via the secretory pathway, a unique finding as most PPOs are predicted to be chloroplast proteins. Phylogenetic reconstruction of these sequences revealed that large PPO gene repertoires in some species are mostly a consequence of independent bursts of gene duplication, while the lineage leading to Arabidopsis must have lost all PPO genes. CONCLUSION: Our survey identified PPOs in gene families of varying sizes in all land plants except in the genus Arabidopsis. While we found variation in intron numbers and positions, overall PPO gene structure is congruent with the phylogenetic relationships based on primary sequence data. The dynamic nature of this gene family differentiates PPO from other oxidative enzymes, and is consistent with a protein important for a diversity of functions relating to environmental adaptation. More... »

PAGES

395

References to SciGraph publications

  • 2011-09. Insights to Sequence Information of Polyphenol Oxidase Enzyme from Different Source Organisms in APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
  • 1996. Polyphenol Oxidase as a Component of the Inducible Defense Response in Tomato against Herbivores in PHYTOCHEMICAL DIVERSITY AND REDUNDANCY IN ECOLOGICAL INTERACTIONS
  • 2011-10. The polyphenol oxidase gene family in poplar: phylogeny, differential expression and identification of a novel, vacuolar isoform in PLANTA
  • 2008-04. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) in NATURE
  • 2008. Defensive Roles of Polyphenol Oxidase in Plants in INDUCED PLANT RESISTANCE TO HERBIVORY
  • 2010-02. Genome-wide analysis of the chalcone synthase superfamily genes of Physcomitrella patens in PLANT MOLECULAR BIOLOGY
  • 2011-12. BRAD, the genetics and genomics database for Brassica plants in BMC PLANT BIOLOGY
  • 1994. Polyphenol Oxidase in GENETIC ENGINEERING OF PLANT SECONDARY METABOLISM
  • 2009-12. The genome of the cucumber, Cucumis sativus L. in NATURE GENETICS
  • 2009-12-28. The Impact of Genomics on Advances in Herbivore Defense and Secondary Metabolism in Populus in GENETICS AND GENOMICS OF POPULUS
  • 1993-03. Organisation of the tomato polyphenol oxidase gene family in PLANT MOLECULAR BIOLOGY
  • 2009-12. Identification of an extensive gene cluster among a family of PPOs in Trifolium pratense L. (red clover) using a large insert BAC library in BMC PLANT BIOLOGY
  • 2010-01. Genome sequence of the palaeopolyploid soybean in NATURE
  • 1998-12. Crystal structure of a plant catechol oxidase containing a dicopper center in NATURE STRUCTURAL & MOLECULAR BIOLOGY
  • 2010-09. Draft genome sequence of the oilseed species Ricinus communis in NATURE BIOTECHNOLOGY
  • 1996-09. Isolation of a full-length cDNA encoding polyphenol oxidase from sugarcane, a C4 grass in PLANT MOLECULAR BIOLOGY
  • 2009-01. The Sorghum bicolor genome and the diversification of grasses in NATURE
  • 2007-09. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla in NATURE
  • 2007-05. Polyphenol oxidase (PPO) in wheat and wild relatives: molecular evidence for a multigene family in THEORETICAL AND APPLIED GENETICS
  • 1999-03. Tyrosinase involved in betalain biosynthesis of higher plants in PLANTA
  • 2007-04. Locating proteins in the cell using TargetP, SignalP and related tools in NATURE PROTOCOLS
  • 2000-12. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana in NATURE
  • 2010-02-11. Genome sequencing and analysis of the model grass Brachypodium distachyon in NATURE
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1186/1471-2164-13-395

    DOI

    http://dx.doi.org/10.1186/1471-2164-13-395

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1007132557

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/22897796


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