Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2008-12

AUTHORS

Johannes Krause, Tina Unger, Aline Noçon, Anna-Sapfo Malaspinas, Sergios-Orestis Kolokotronis, Mathias Stiller, Leopoldo Soibelzon, Helen Spriggs, Paul H Dear, Adrian W Briggs, Sarah CE Bray, Stephen J O'Brien, Gernot Rabeder, Paul Matheus, Alan Cooper, Montgomery Slatkin, Svante Pääbo, Michael Hofreiter

ABSTRACT

BACKGROUND: Despite being one of the most studied families within the Carnivora, the phylogenetic relationships among the members of the bear family (Ursidae) have long remained unclear. Widely divergent topologies have been suggested based on various data sets and methods. RESULTS: We present a fully resolved phylogeny for ursids based on ten complete mitochondrial genome sequences from all eight living and two recently extinct bear species, the European cave bear (Ursus spelaeus) and the American giant short-faced bear (Arctodus simus). The mitogenomic data yield a well-resolved topology for ursids, with the sloth bear at the basal position within the genus Ursus. The sun bear is the sister taxon to both the American and Asian black bears, and this clade is the sister clade of cave bear, brown bear and polar bear confirming a recent study on bear mitochondrial genomes. CONCLUSION: Sequences from extinct bears represent the third and fourth Pleistocene species for which complete mitochondrial genomes have been sequenced. Moreover, the cave bear specimen demonstrates that mitogenomic studies can be applied to Pleistocene fossils that have not been preserved in permafrost, and therefore have a broad application within ancient DNA research. Molecular dating of the mtDNA divergence times suggests a rapid radiation of bears in both the Old and New Worlds around 5 million years ago, at the Miocene-Pliocene boundary. This coincides with major global changes, such as the Messinian crisis and the first opening of the Bering Strait, and suggests a global influence of such events on species radiations. More... »

PAGES

220

Identifiers

URI

http://scigraph.springernature.com/pub.10.1186/1471-2148-8-220

DOI

http://dx.doi.org/10.1186/1471-2148-8-220

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1008095771

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/18662376


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Animals", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "DNA, Mitochondrial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Extinction, Biological", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Fossils", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genetic Speciation", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome, Mitochondrial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Phylogeny", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Polymerase Chain Reaction", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Sequence Alignment", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Ursidae", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Max Planck Institute for Evolutionary Anthropology", 
          "id": "https://www.grid.ac/institutes/grid.419518.0", 
          "name": [
            "Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D-04103, Leipzig, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Krause", 
        "givenName": "Johannes", 
        "id": "sg:person.01141770755.56", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01141770755.56"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Max Planck Institute for Evolutionary Anthropology", 
          "id": "https://www.grid.ac/institutes/grid.419518.0", 
          "name": [
            "Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D-04103, Leipzig, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Unger", 
        "givenName": "Tina", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Max Planck Institute for Evolutionary Anthropology", 
          "id": "https://www.grid.ac/institutes/grid.419518.0", 
          "name": [
            "Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D-04103, Leipzig, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "No\u00e7on", 
        "givenName": "Aline", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of California, Berkeley", 
          "id": "https://www.grid.ac/institutes/grid.47840.3f", 
          "name": [
            "Department of Integrative Biology, University of California, 94720-3140, Berkeley, CA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Malaspinas", 
        "givenName": "Anna-Sapfo", 
        "id": "sg:person.01170613613.74", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01170613613.74"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "American Museum of Natural History", 
          "id": "https://www.grid.ac/institutes/grid.241963.b", 
          "name": [
            "Department of Ecology, Evolution and Environmental Biology, Columbia University, 1200 Amsterdam Avenue, MC555710027, New York, NY, USA", 
            "Sackler Institute for Comparative Genomics, American Museum of Natural History, Central Park West at 79th Street, 10024, New York, NY, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Kolokotronis", 
        "givenName": "Sergios-Orestis", 
        "id": "sg:person.01123530600.70", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01123530600.70"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Max Planck Institute for Evolutionary Anthropology", 
          "id": "https://www.grid.ac/institutes/grid.419518.0", 
          "name": [
            "Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D-04103, Leipzig, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Stiller", 
        "givenName": "Mathias", 
        "id": "sg:person.01365624305.68", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01365624305.68"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Departamento Cient\u00edfico Paleontologia de Vertebrados, Museo de La Plata. Paseo del Bosque, 1900, La Plata, Buenos Aires, Argentina"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Soibelzon", 
        "givenName": "Leopoldo", 
        "id": "sg:person.0744650756.28", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0744650756.28"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "MRC Laboratory of Molecular Biology", 
          "id": "https://www.grid.ac/institutes/grid.42475.30", 
          "name": [
            "MRC Laboratory of Molecular Biology, Hills Road, CB2 2QH, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Spriggs", 
        "givenName": "Helen", 
        "id": "sg:person.01017501031.18", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01017501031.18"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "MRC Laboratory of Molecular Biology", 
          "id": "https://www.grid.ac/institutes/grid.42475.30", 
          "name": [
            "MRC Laboratory of Molecular Biology, Hills Road, CB2 2QH, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Dear", 
        "givenName": "Paul H", 
        "id": "sg:person.016667736115.82", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016667736115.82"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Max Planck Institute for Evolutionary Anthropology", 
          "id": "https://www.grid.ac/institutes/grid.419518.0", 
          "name": [
            "Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D-04103, Leipzig, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Briggs", 
        "givenName": "Adrian W", 
        "id": "sg:person.01140726254.84", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01140726254.84"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Adelaide", 
          "id": "https://www.grid.ac/institutes/grid.1010.0", 
          "name": [
            "Australian Centre for Ancient DNA, School of Earth and Environmental Sciences, University of Adelaide, 5005, Adelaide, SA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Bray", 
        "givenName": "Sarah CE", 
        "id": "sg:person.01072675205.48", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01072675205.48"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "National Cancer Institute", 
          "id": "https://www.grid.ac/institutes/grid.48336.3a", 
          "name": [
            "Laboratory of Genomic Diversity, National Cancer Institute, 21702-1201, Frederick, MD, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "O'Brien", 
        "givenName": "Stephen J", 
        "id": "sg:person.013503714052.86", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013503714052.86"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Vienna", 
          "id": "https://www.grid.ac/institutes/grid.10420.37", 
          "name": [
            "Department of Paleontology, University of Vienna, 1090, Vienna, Austria"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Rabeder", 
        "givenName": "Gernot", 
        "id": "sg:person.01207123605.74", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01207123605.74"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Alaska Fairbanks", 
          "id": "https://www.grid.ac/institutes/grid.70738.3b", 
          "name": [
            "Alaska Quaternary Center, University of Alaska Fairbanks, 99775, Fairbanks, AK, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Matheus", 
        "givenName": "Paul", 
        "id": "sg:person.01255237005.82", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01255237005.82"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Adelaide", 
          "id": "https://www.grid.ac/institutes/grid.1010.0", 
          "name": [
            "Australian Centre for Ancient DNA, School of Earth and Environmental Sciences, University of Adelaide, 5005, Adelaide, SA, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Cooper", 
        "givenName": "Alan", 
        "id": "sg:person.01232235164.25", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01232235164.25"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of California, Berkeley", 
          "id": "https://www.grid.ac/institutes/grid.47840.3f", 
          "name": [
            "Department of Integrative Biology, University of California, 94720-3140, Berkeley, CA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Slatkin", 
        "givenName": "Montgomery", 
        "id": "sg:person.0716174524.63", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0716174524.63"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Max Planck Institute for Evolutionary Anthropology", 
          "id": "https://www.grid.ac/institutes/grid.419518.0", 
          "name": [
            "Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D-04103, Leipzig, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "P\u00e4\u00e4bo", 
        "givenName": "Svante", 
        "id": "sg:person.01330431426.48", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01330431426.48"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Max Planck Institute for Evolutionary Anthropology", 
          "id": "https://www.grid.ac/institutes/grid.419518.0", 
          "name": [
            "Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D-04103, Leipzig, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Hofreiter", 
        "givenName": "Michael", 
        "id": "sg:person.01046665765.30", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01046665765.30"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1093/bioinformatics/17.12.1246", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001228928"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0960-9822(01)00046-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002966225"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02101990", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003359288", 
          "https://doi.org/10.1007/bf02101990"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02101990", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003359288", 
          "https://doi.org/10.1007/bf02101990"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0605327103", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003805091"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.earth.27.1.463", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005869160"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.cub.2003.12.035", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006847499"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nprot.2006.84", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007310701", 
          "https://doi.org/10.1038/nprot.2006.84"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nprot.2006.84", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007310701", 
          "https://doi.org/10.1038/nprot.2006.84"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1098/rstb.1998.0198", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007318702"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.palaeo.2006.03.042", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008058161"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1096-0031.1999.tb00268.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008762742"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1096-0031.1999.tb00268.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008762742"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2148-7-214", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010584451", 
          "https://doi.org/10.1186/1471-2148-7-214"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1029/1999pa000435", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013348366"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1096-0031.2007.00173.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014487936"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature04432", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014777217", 
          "https://doi.org/10.1038/nature04432"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature04432", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014777217", 
          "https://doi.org/10.1038/nature04432"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature04432", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014777217", 
          "https://doi.org/10.1038/nature04432"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/267399a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014873542", 
          "https://doi.org/10.1038/267399a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1098/rspb.1994.0028", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015330310"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/oxfordjournals.molbev.a004090", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015491685"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/mpev.1994.1041", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015576145"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2105-9-103", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018294105", 
          "https://doi.org/10.1186/1471-2105-9-103"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/oxfordjournals.molbev.a004213", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018787392"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/16446", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019422121", 
          "https://doi.org/10.1038/16446"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/16446", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019422121", 
          "https://doi.org/10.1038/16446"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/317140a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020743843", 
          "https://doi.org/10.1038/317140a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/29.23.4793", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020812153"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/mpev.1999.0730", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020910946"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pbio.0040073", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024104985"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pbio.0040073", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024104985"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkh340", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025846396"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/mpev.1996.0051", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026376489"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/(sici)1096-8644(1998)107:27+<93::aid-ajpa5>3.0.co;2-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027491766"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0704198104", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028302153"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pbio.0050207", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029205478"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.ympev.2007.06.019", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031211940"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1463-6409.2006.00267.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1033940500"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/13.5.555", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036075858"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btg180", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036252078"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02101694", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039008589", 
          "https://doi.org/10.1007/bf02101694"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02101694", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039008589", 
          "https://doi.org/10.1007/bf02101694"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0509585102", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039961869"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/13779", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040703029", 
          "https://doi.org/10.1038/13779"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/13779", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040703029", 
          "https://doi.org/10.1038/13779"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1159/000132455", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040870792"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/mpev.1999.0637", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040951378"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.ympev.2006.05.025", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041633176"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/35055536", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042248501", 
          "https://doi.org/10.1038/35055536"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/35055536", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042248501", 
          "https://doi.org/10.1038/35055536"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01734359", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044065382", 
          "https://doi.org/10.1007/bf01734359"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01734359", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044065382", 
          "https://doi.org/10.1007/bf01734359"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/molbev/msj024", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044862822"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/molbev/msj024", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044862822"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.ympev.2005.04.025", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044918034"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0704665104", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045401726"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1096-0031.1994.tb00181.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045581042"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1096-0031.1994.tb00181.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045581042"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btl446", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046470836"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.es.24.110193.002343", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1047143680"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1122277", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1048100892"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1096-0031.2008.00217.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1048321372"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.ympev.2006.10.003", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049295987"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/mpev.1996.0044", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050019441"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/bth352", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050086076"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.ympev.2004.08.001", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051109815"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2148-7-198", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051535279", 
          "https://doi.org/10.1186/1471-2148-7-198"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkm588", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053124372"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0022-5193(05)80104-3", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053616169"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1080/10635150290069913", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1058369271"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1840702", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062509890"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/oxfordjournals.molbev.a040258", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1082376727"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/oxfordjournals.molbev.a040082", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1082735188"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1017/cbo9780511529924.012", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1087539263"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.5962/bhl.title.3434", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1099515966"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.5962/bhl.title.3290", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1099521244"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2008-12", 
    "datePublishedReg": "2008-12-01", 
    "description": "BACKGROUND: Despite being one of the most studied families within the Carnivora, the phylogenetic relationships among the members of the bear family (Ursidae) have long remained unclear. Widely divergent topologies have been suggested based on various data sets and methods.\nRESULTS: We present a fully resolved phylogeny for ursids based on ten complete mitochondrial genome sequences from all eight living and two recently extinct bear species, the European cave bear (Ursus spelaeus) and the American giant short-faced bear (Arctodus simus). The mitogenomic data yield a well-resolved topology for ursids, with the sloth bear at the basal position within the genus Ursus. The sun bear is the sister taxon to both the American and Asian black bears, and this clade is the sister clade of cave bear, brown bear and polar bear confirming a recent study on bear mitochondrial genomes.\nCONCLUSION: Sequences from extinct bears represent the third and fourth Pleistocene species for which complete mitochondrial genomes have been sequenced. Moreover, the cave bear specimen demonstrates that mitogenomic studies can be applied to Pleistocene fossils that have not been preserved in permafrost, and therefore have a broad application within ancient DNA research. Molecular dating of the mtDNA divergence times suggests a rapid radiation of bears in both the Old and New Worlds around 5 million years ago, at the Miocene-Pliocene boundary. This coincides with major global changes, such as the Messinian crisis and the first opening of the Bering Strait, and suggests a global influence of such events on species radiations.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1186/1471-2148-8-220", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": true, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.2753577", 
        "type": "MonetaryGrant"
      }, 
      {
        "id": "sg:grant.2512494", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1024249", 
        "issn": [
          "1471-2148"
        ], 
        "name": "BMC Evolutionary Biology", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "8"
      }
    ], 
    "name": "Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary", 
    "pagination": "220", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "2691918f14450e9d410b6d57a85e59fe6dc6411eafab4b5881d2dc7bebc7231a"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "18662376"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "100966975"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1186/1471-2148-8-220"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1008095771"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1186/1471-2148-8-220", 
      "https://app.dimensions.ai/details/publication/pub.1008095771"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T22:29", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8690_00000503.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1186%2F1471-2148-8-220"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1186/1471-2148-8-220'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1186/1471-2148-8-220'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1186/1471-2148-8-220'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1186/1471-2148-8-220'


 

This table displays all metadata directly associated to this object as RDF triples.

458 TRIPLES      21 PREDICATES      103 URIs      31 LITERALS      19 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1186/1471-2148-8-220 schema:about N05aa13a9a7e94338aa10c6fbb49326c0
2 N0d35bb913c3248dba8a2b6959f0ca552
3 N22512f1e8e494107800c13a0355ecf86
4 N514daace8005454eaf9b44b8d61290db
5 N6184aefc5961429aab58327ca0817286
6 Nbd58c1897e8a47cbbea98b7be6f56cf2
7 Nbe9ea738bfe24e0fbfa45cf5304decd6
8 Ne6c1a545ba324b288945e10c5197691d
9 Neb11123b91ca439ca04f42f31262392e
10 Nfe70439d28c84242a1acb848c1cbce9c
11 anzsrc-for:06
12 anzsrc-for:0604
13 schema:author N7cc9c5e736a344b0a04b330e731abc4f
14 schema:citation sg:pub.10.1007/bf01734359
15 sg:pub.10.1007/bf02101694
16 sg:pub.10.1007/bf02101990
17 sg:pub.10.1038/13779
18 sg:pub.10.1038/16446
19 sg:pub.10.1038/267399a0
20 sg:pub.10.1038/317140a0
21 sg:pub.10.1038/35055536
22 sg:pub.10.1038/nature04432
23 sg:pub.10.1038/nprot.2006.84
24 sg:pub.10.1186/1471-2105-9-103
25 sg:pub.10.1186/1471-2148-7-198
26 sg:pub.10.1186/1471-2148-7-214
27 https://doi.org/10.1002/(sici)1096-8644(1998)107:27+<93::aid-ajpa5>3.0.co;2-x
28 https://doi.org/10.1006/mpev.1994.1041
29 https://doi.org/10.1006/mpev.1996.0044
30 https://doi.org/10.1006/mpev.1996.0051
31 https://doi.org/10.1006/mpev.1999.0637
32 https://doi.org/10.1006/mpev.1999.0730
33 https://doi.org/10.1016/j.cub.2003.12.035
34 https://doi.org/10.1016/j.palaeo.2006.03.042
35 https://doi.org/10.1016/j.ympev.2004.08.001
36 https://doi.org/10.1016/j.ympev.2005.04.025
37 https://doi.org/10.1016/j.ympev.2006.05.025
38 https://doi.org/10.1016/j.ympev.2006.10.003
39 https://doi.org/10.1016/j.ympev.2007.06.019
40 https://doi.org/10.1016/s0022-5193(05)80104-3
41 https://doi.org/10.1016/s0960-9822(01)00046-x
42 https://doi.org/10.1017/cbo9780511529924.012
43 https://doi.org/10.1029/1999pa000435
44 https://doi.org/10.1073/pnas.0509585102
45 https://doi.org/10.1073/pnas.0605327103
46 https://doi.org/10.1073/pnas.0704198104
47 https://doi.org/10.1073/pnas.0704665104
48 https://doi.org/10.1080/10635150290069913
49 https://doi.org/10.1093/bioinformatics/13.5.555
50 https://doi.org/10.1093/bioinformatics/17.12.1246
51 https://doi.org/10.1093/bioinformatics/btg180
52 https://doi.org/10.1093/bioinformatics/bth352
53 https://doi.org/10.1093/bioinformatics/btl446
54 https://doi.org/10.1093/molbev/msj024
55 https://doi.org/10.1093/nar/29.23.4793
56 https://doi.org/10.1093/nar/gkh340
57 https://doi.org/10.1093/nar/gkm588
58 https://doi.org/10.1093/oxfordjournals.molbev.a004090
59 https://doi.org/10.1093/oxfordjournals.molbev.a004213
60 https://doi.org/10.1093/oxfordjournals.molbev.a040082
61 https://doi.org/10.1093/oxfordjournals.molbev.a040258
62 https://doi.org/10.1098/rspb.1994.0028
63 https://doi.org/10.1098/rstb.1998.0198
64 https://doi.org/10.1111/j.1096-0031.1994.tb00181.x
65 https://doi.org/10.1111/j.1096-0031.1999.tb00268.x
66 https://doi.org/10.1111/j.1096-0031.2007.00173.x
67 https://doi.org/10.1111/j.1096-0031.2008.00217.x
68 https://doi.org/10.1111/j.1463-6409.2006.00267.x
69 https://doi.org/10.1126/science.1122277
70 https://doi.org/10.1126/science.1840702
71 https://doi.org/10.1146/annurev.earth.27.1.463
72 https://doi.org/10.1146/annurev.es.24.110193.002343
73 https://doi.org/10.1159/000132455
74 https://doi.org/10.1371/journal.pbio.0040073
75 https://doi.org/10.1371/journal.pbio.0050207
76 https://doi.org/10.5962/bhl.title.3290
77 https://doi.org/10.5962/bhl.title.3434
78 schema:datePublished 2008-12
79 schema:datePublishedReg 2008-12-01
80 schema:description BACKGROUND: Despite being one of the most studied families within the Carnivora, the phylogenetic relationships among the members of the bear family (Ursidae) have long remained unclear. Widely divergent topologies have been suggested based on various data sets and methods. RESULTS: We present a fully resolved phylogeny for ursids based on ten complete mitochondrial genome sequences from all eight living and two recently extinct bear species, the European cave bear (Ursus spelaeus) and the American giant short-faced bear (Arctodus simus). The mitogenomic data yield a well-resolved topology for ursids, with the sloth bear at the basal position within the genus Ursus. The sun bear is the sister taxon to both the American and Asian black bears, and this clade is the sister clade of cave bear, brown bear and polar bear confirming a recent study on bear mitochondrial genomes. CONCLUSION: Sequences from extinct bears represent the third and fourth Pleistocene species for which complete mitochondrial genomes have been sequenced. Moreover, the cave bear specimen demonstrates that mitogenomic studies can be applied to Pleistocene fossils that have not been preserved in permafrost, and therefore have a broad application within ancient DNA research. Molecular dating of the mtDNA divergence times suggests a rapid radiation of bears in both the Old and New Worlds around 5 million years ago, at the Miocene-Pliocene boundary. This coincides with major global changes, such as the Messinian crisis and the first opening of the Bering Strait, and suggests a global influence of such events on species radiations.
81 schema:genre research_article
82 schema:inLanguage en
83 schema:isAccessibleForFree true
84 schema:isPartOf N1cf5a981bcc44a6d84ad93bbb228e29e
85 N5e1472ec88cb427180ced850292a6202
86 sg:journal.1024249
87 schema:name Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary
88 schema:pagination 220
89 schema:productId N111d8039ea3949d7ba43dc348194d683
90 N17639e3374f9444c9487ad0122a2b1e9
91 N6a5d365f8cbd4b9d9a9b1008a8ea094f
92 N8f972d9e0f724769a89531b5fa016e64
93 Nf563ac5c63ca45d2bfb0ad885dffb2ae
94 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008095771
95 https://doi.org/10.1186/1471-2148-8-220
96 schema:sdDatePublished 2019-04-10T22:29
97 schema:sdLicense https://scigraph.springernature.com/explorer/license/
98 schema:sdPublisher Nb4c6f99011d74416ab20298deaea17b8
99 schema:url http://link.springer.com/10.1186%2F1471-2148-8-220
100 sgo:license sg:explorer/license/
101 sgo:sdDataset articles
102 rdf:type schema:ScholarlyArticle
103 N03a297ab24f149e5ab31236a35d5cc4a rdf:first sg:person.01140726254.84
104 rdf:rest N41c7164bdb8a408393bd5acc9996244e
105 N05aa13a9a7e94338aa10c6fbb49326c0 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
106 schema:name Polymerase Chain Reaction
107 rdf:type schema:DefinedTerm
108 N0d35bb913c3248dba8a2b6959f0ca552 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
109 schema:name Genome, Mitochondrial
110 rdf:type schema:DefinedTerm
111 N0fa1e24b324c4bd88fc802a796adc2cb schema:name Departamento Científico Paleontologia de Vertebrados, Museo de La Plata. Paseo del Bosque, 1900, La Plata, Buenos Aires, Argentina
112 rdf:type schema:Organization
113 N111d8039ea3949d7ba43dc348194d683 schema:name pubmed_id
114 schema:value 18662376
115 rdf:type schema:PropertyValue
116 N121e868dcc4c45409232decf78cdc95e rdf:first sg:person.01170613613.74
117 rdf:rest N866d254707db4615a757482e666ba08b
118 N14d84ade64524d44b4f9a2d3ce7450e8 rdf:first sg:person.016667736115.82
119 rdf:rest N03a297ab24f149e5ab31236a35d5cc4a
120 N173afd266e984cc6b5f65af602691ffb rdf:first sg:person.01330431426.48
121 rdf:rest N89dd5006986440ae8509ae37c948bc22
122 N17639e3374f9444c9487ad0122a2b1e9 schema:name readcube_id
123 schema:value 2691918f14450e9d410b6d57a85e59fe6dc6411eafab4b5881d2dc7bebc7231a
124 rdf:type schema:PropertyValue
125 N1ce6f9f769ee411287c90c31406d3bb8 rdf:first sg:person.01255237005.82
126 rdf:rest N98ef3fa184534aa2acd55ee93709596f
127 N1cf5a981bcc44a6d84ad93bbb228e29e schema:issueNumber 1
128 rdf:type schema:PublicationIssue
129 N219a542ef0af4ad4ad2389ff9951f78e rdf:first sg:person.01017501031.18
130 rdf:rest N14d84ade64524d44b4f9a2d3ce7450e8
131 N22512f1e8e494107800c13a0355ecf86 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
132 schema:name Sequence Alignment
133 rdf:type schema:DefinedTerm
134 N24a933e026c143679f414b259f0bfa97 rdf:first sg:person.0716174524.63
135 rdf:rest N173afd266e984cc6b5f65af602691ffb
136 N2d53c33e299545249ce17f2192ed3694 rdf:first sg:person.0744650756.28
137 rdf:rest N219a542ef0af4ad4ad2389ff9951f78e
138 N3f1293b40bde44d88e56c9519ef73556 schema:affiliation https://www.grid.ac/institutes/grid.419518.0
139 schema:familyName Noçon
140 schema:givenName Aline
141 rdf:type schema:Person
142 N41c7164bdb8a408393bd5acc9996244e rdf:first sg:person.01072675205.48
143 rdf:rest N7519022527b442f7a12186bcc23c6a54
144 N43ffe95130a341cdbd48c6dca5b29213 rdf:first sg:person.01207123605.74
145 rdf:rest N1ce6f9f769ee411287c90c31406d3bb8
146 N4c023f87e87c42d5a872a97063d45e66 rdf:first sg:person.01365624305.68
147 rdf:rest N2d53c33e299545249ce17f2192ed3694
148 N514daace8005454eaf9b44b8d61290db schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
149 schema:name Genetic Speciation
150 rdf:type schema:DefinedTerm
151 N5e1472ec88cb427180ced850292a6202 schema:volumeNumber 8
152 rdf:type schema:PublicationVolume
153 N6184aefc5961429aab58327ca0817286 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
154 schema:name Phylogeny
155 rdf:type schema:DefinedTerm
156 N6a5d365f8cbd4b9d9a9b1008a8ea094f schema:name dimensions_id
157 schema:value pub.1008095771
158 rdf:type schema:PropertyValue
159 N713a48a19f504a7e95d5e73bcd6bf381 rdf:first N3f1293b40bde44d88e56c9519ef73556
160 rdf:rest N121e868dcc4c45409232decf78cdc95e
161 N7519022527b442f7a12186bcc23c6a54 rdf:first sg:person.013503714052.86
162 rdf:rest N43ffe95130a341cdbd48c6dca5b29213
163 N7cc9c5e736a344b0a04b330e731abc4f rdf:first sg:person.01141770755.56
164 rdf:rest Ncea01426a5ce49e7aa4062d9aada01af
165 N866d254707db4615a757482e666ba08b rdf:first sg:person.01123530600.70
166 rdf:rest N4c023f87e87c42d5a872a97063d45e66
167 N89dd5006986440ae8509ae37c948bc22 rdf:first sg:person.01046665765.30
168 rdf:rest rdf:nil
169 N8f972d9e0f724769a89531b5fa016e64 schema:name doi
170 schema:value 10.1186/1471-2148-8-220
171 rdf:type schema:PropertyValue
172 N98ef3fa184534aa2acd55ee93709596f rdf:first sg:person.01232235164.25
173 rdf:rest N24a933e026c143679f414b259f0bfa97
174 Nb4c6f99011d74416ab20298deaea17b8 schema:name Springer Nature - SN SciGraph project
175 rdf:type schema:Organization
176 Nb80da7cb51354a87821a70a05936b1a4 schema:affiliation https://www.grid.ac/institutes/grid.419518.0
177 schema:familyName Unger
178 schema:givenName Tina
179 rdf:type schema:Person
180 Nbd58c1897e8a47cbbea98b7be6f56cf2 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
181 schema:name Animals
182 rdf:type schema:DefinedTerm
183 Nbe9ea738bfe24e0fbfa45cf5304decd6 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
184 schema:name DNA, Mitochondrial
185 rdf:type schema:DefinedTerm
186 Ncea01426a5ce49e7aa4062d9aada01af rdf:first Nb80da7cb51354a87821a70a05936b1a4
187 rdf:rest N713a48a19f504a7e95d5e73bcd6bf381
188 Ne6c1a545ba324b288945e10c5197691d schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
189 schema:name Ursidae
190 rdf:type schema:DefinedTerm
191 Neb11123b91ca439ca04f42f31262392e schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
192 schema:name Fossils
193 rdf:type schema:DefinedTerm
194 Nf563ac5c63ca45d2bfb0ad885dffb2ae schema:name nlm_unique_id
195 schema:value 100966975
196 rdf:type schema:PropertyValue
197 Nfe70439d28c84242a1acb848c1cbce9c schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
198 schema:name Extinction, Biological
199 rdf:type schema:DefinedTerm
200 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
201 schema:name Biological Sciences
202 rdf:type schema:DefinedTerm
203 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
204 schema:name Genetics
205 rdf:type schema:DefinedTerm
206 sg:grant.2512494 http://pending.schema.org/fundedItem sg:pub.10.1186/1471-2148-8-220
207 rdf:type schema:MonetaryGrant
208 sg:grant.2753577 http://pending.schema.org/fundedItem sg:pub.10.1186/1471-2148-8-220
209 rdf:type schema:MonetaryGrant
210 sg:journal.1024249 schema:issn 1471-2148
211 schema:name BMC Evolutionary Biology
212 rdf:type schema:Periodical
213 sg:person.01017501031.18 schema:affiliation https://www.grid.ac/institutes/grid.42475.30
214 schema:familyName Spriggs
215 schema:givenName Helen
216 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01017501031.18
217 rdf:type schema:Person
218 sg:person.01046665765.30 schema:affiliation https://www.grid.ac/institutes/grid.419518.0
219 schema:familyName Hofreiter
220 schema:givenName Michael
221 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01046665765.30
222 rdf:type schema:Person
223 sg:person.01072675205.48 schema:affiliation https://www.grid.ac/institutes/grid.1010.0
224 schema:familyName Bray
225 schema:givenName Sarah CE
226 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01072675205.48
227 rdf:type schema:Person
228 sg:person.01123530600.70 schema:affiliation https://www.grid.ac/institutes/grid.241963.b
229 schema:familyName Kolokotronis
230 schema:givenName Sergios-Orestis
231 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01123530600.70
232 rdf:type schema:Person
233 sg:person.01140726254.84 schema:affiliation https://www.grid.ac/institutes/grid.419518.0
234 schema:familyName Briggs
235 schema:givenName Adrian W
236 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01140726254.84
237 rdf:type schema:Person
238 sg:person.01141770755.56 schema:affiliation https://www.grid.ac/institutes/grid.419518.0
239 schema:familyName Krause
240 schema:givenName Johannes
241 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01141770755.56
242 rdf:type schema:Person
243 sg:person.01170613613.74 schema:affiliation https://www.grid.ac/institutes/grid.47840.3f
244 schema:familyName Malaspinas
245 schema:givenName Anna-Sapfo
246 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01170613613.74
247 rdf:type schema:Person
248 sg:person.01207123605.74 schema:affiliation https://www.grid.ac/institutes/grid.10420.37
249 schema:familyName Rabeder
250 schema:givenName Gernot
251 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01207123605.74
252 rdf:type schema:Person
253 sg:person.01232235164.25 schema:affiliation https://www.grid.ac/institutes/grid.1010.0
254 schema:familyName Cooper
255 schema:givenName Alan
256 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01232235164.25
257 rdf:type schema:Person
258 sg:person.01255237005.82 schema:affiliation https://www.grid.ac/institutes/grid.70738.3b
259 schema:familyName Matheus
260 schema:givenName Paul
261 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01255237005.82
262 rdf:type schema:Person
263 sg:person.01330431426.48 schema:affiliation https://www.grid.ac/institutes/grid.419518.0
264 schema:familyName Pääbo
265 schema:givenName Svante
266 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01330431426.48
267 rdf:type schema:Person
268 sg:person.013503714052.86 schema:affiliation https://www.grid.ac/institutes/grid.48336.3a
269 schema:familyName O'Brien
270 schema:givenName Stephen J
271 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013503714052.86
272 rdf:type schema:Person
273 sg:person.01365624305.68 schema:affiliation https://www.grid.ac/institutes/grid.419518.0
274 schema:familyName Stiller
275 schema:givenName Mathias
276 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01365624305.68
277 rdf:type schema:Person
278 sg:person.016667736115.82 schema:affiliation https://www.grid.ac/institutes/grid.42475.30
279 schema:familyName Dear
280 schema:givenName Paul H
281 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016667736115.82
282 rdf:type schema:Person
283 sg:person.0716174524.63 schema:affiliation https://www.grid.ac/institutes/grid.47840.3f
284 schema:familyName Slatkin
285 schema:givenName Montgomery
286 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0716174524.63
287 rdf:type schema:Person
288 sg:person.0744650756.28 schema:affiliation N0fa1e24b324c4bd88fc802a796adc2cb
289 schema:familyName Soibelzon
290 schema:givenName Leopoldo
291 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0744650756.28
292 rdf:type schema:Person
293 sg:pub.10.1007/bf01734359 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044065382
294 https://doi.org/10.1007/bf01734359
295 rdf:type schema:CreativeWork
296 sg:pub.10.1007/bf02101694 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039008589
297 https://doi.org/10.1007/bf02101694
298 rdf:type schema:CreativeWork
299 sg:pub.10.1007/bf02101990 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003359288
300 https://doi.org/10.1007/bf02101990
301 rdf:type schema:CreativeWork
302 sg:pub.10.1038/13779 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040703029
303 https://doi.org/10.1038/13779
304 rdf:type schema:CreativeWork
305 sg:pub.10.1038/16446 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019422121
306 https://doi.org/10.1038/16446
307 rdf:type schema:CreativeWork
308 sg:pub.10.1038/267399a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014873542
309 https://doi.org/10.1038/267399a0
310 rdf:type schema:CreativeWork
311 sg:pub.10.1038/317140a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020743843
312 https://doi.org/10.1038/317140a0
313 rdf:type schema:CreativeWork
314 sg:pub.10.1038/35055536 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042248501
315 https://doi.org/10.1038/35055536
316 rdf:type schema:CreativeWork
317 sg:pub.10.1038/nature04432 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014777217
318 https://doi.org/10.1038/nature04432
319 rdf:type schema:CreativeWork
320 sg:pub.10.1038/nprot.2006.84 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007310701
321 https://doi.org/10.1038/nprot.2006.84
322 rdf:type schema:CreativeWork
323 sg:pub.10.1186/1471-2105-9-103 schema:sameAs https://app.dimensions.ai/details/publication/pub.1018294105
324 https://doi.org/10.1186/1471-2105-9-103
325 rdf:type schema:CreativeWork
326 sg:pub.10.1186/1471-2148-7-198 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051535279
327 https://doi.org/10.1186/1471-2148-7-198
328 rdf:type schema:CreativeWork
329 sg:pub.10.1186/1471-2148-7-214 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010584451
330 https://doi.org/10.1186/1471-2148-7-214
331 rdf:type schema:CreativeWork
332 https://doi.org/10.1002/(sici)1096-8644(1998)107:27+<93::aid-ajpa5>3.0.co;2-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1027491766
333 rdf:type schema:CreativeWork
334 https://doi.org/10.1006/mpev.1994.1041 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015576145
335 rdf:type schema:CreativeWork
336 https://doi.org/10.1006/mpev.1996.0044 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050019441
337 rdf:type schema:CreativeWork
338 https://doi.org/10.1006/mpev.1996.0051 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026376489
339 rdf:type schema:CreativeWork
340 https://doi.org/10.1006/mpev.1999.0637 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040951378
341 rdf:type schema:CreativeWork
342 https://doi.org/10.1006/mpev.1999.0730 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020910946
343 rdf:type schema:CreativeWork
344 https://doi.org/10.1016/j.cub.2003.12.035 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006847499
345 rdf:type schema:CreativeWork
346 https://doi.org/10.1016/j.palaeo.2006.03.042 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008058161
347 rdf:type schema:CreativeWork
348 https://doi.org/10.1016/j.ympev.2004.08.001 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051109815
349 rdf:type schema:CreativeWork
350 https://doi.org/10.1016/j.ympev.2005.04.025 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044918034
351 rdf:type schema:CreativeWork
352 https://doi.org/10.1016/j.ympev.2006.05.025 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041633176
353 rdf:type schema:CreativeWork
354 https://doi.org/10.1016/j.ympev.2006.10.003 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049295987
355 rdf:type schema:CreativeWork
356 https://doi.org/10.1016/j.ympev.2007.06.019 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031211940
357 rdf:type schema:CreativeWork
358 https://doi.org/10.1016/s0022-5193(05)80104-3 schema:sameAs https://app.dimensions.ai/details/publication/pub.1053616169
359 rdf:type schema:CreativeWork
360 https://doi.org/10.1016/s0960-9822(01)00046-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1002966225
361 rdf:type schema:CreativeWork
362 https://doi.org/10.1017/cbo9780511529924.012 schema:sameAs https://app.dimensions.ai/details/publication/pub.1087539263
363 rdf:type schema:CreativeWork
364 https://doi.org/10.1029/1999pa000435 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013348366
365 rdf:type schema:CreativeWork
366 https://doi.org/10.1073/pnas.0509585102 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039961869
367 rdf:type schema:CreativeWork
368 https://doi.org/10.1073/pnas.0605327103 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003805091
369 rdf:type schema:CreativeWork
370 https://doi.org/10.1073/pnas.0704198104 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028302153
371 rdf:type schema:CreativeWork
372 https://doi.org/10.1073/pnas.0704665104 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045401726
373 rdf:type schema:CreativeWork
374 https://doi.org/10.1080/10635150290069913 schema:sameAs https://app.dimensions.ai/details/publication/pub.1058369271
375 rdf:type schema:CreativeWork
376 https://doi.org/10.1093/bioinformatics/13.5.555 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036075858
377 rdf:type schema:CreativeWork
378 https://doi.org/10.1093/bioinformatics/17.12.1246 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001228928
379 rdf:type schema:CreativeWork
380 https://doi.org/10.1093/bioinformatics/btg180 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036252078
381 rdf:type schema:CreativeWork
382 https://doi.org/10.1093/bioinformatics/bth352 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050086076
383 rdf:type schema:CreativeWork
384 https://doi.org/10.1093/bioinformatics/btl446 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046470836
385 rdf:type schema:CreativeWork
386 https://doi.org/10.1093/molbev/msj024 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044862822
387 rdf:type schema:CreativeWork
388 https://doi.org/10.1093/nar/29.23.4793 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020812153
389 rdf:type schema:CreativeWork
390 https://doi.org/10.1093/nar/gkh340 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025846396
391 rdf:type schema:CreativeWork
392 https://doi.org/10.1093/nar/gkm588 schema:sameAs https://app.dimensions.ai/details/publication/pub.1053124372
393 rdf:type schema:CreativeWork
394 https://doi.org/10.1093/oxfordjournals.molbev.a004090 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015491685
395 rdf:type schema:CreativeWork
396 https://doi.org/10.1093/oxfordjournals.molbev.a004213 schema:sameAs https://app.dimensions.ai/details/publication/pub.1018787392
397 rdf:type schema:CreativeWork
398 https://doi.org/10.1093/oxfordjournals.molbev.a040082 schema:sameAs https://app.dimensions.ai/details/publication/pub.1082735188
399 rdf:type schema:CreativeWork
400 https://doi.org/10.1093/oxfordjournals.molbev.a040258 schema:sameAs https://app.dimensions.ai/details/publication/pub.1082376727
401 rdf:type schema:CreativeWork
402 https://doi.org/10.1098/rspb.1994.0028 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015330310
403 rdf:type schema:CreativeWork
404 https://doi.org/10.1098/rstb.1998.0198 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007318702
405 rdf:type schema:CreativeWork
406 https://doi.org/10.1111/j.1096-0031.1994.tb00181.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1045581042
407 rdf:type schema:CreativeWork
408 https://doi.org/10.1111/j.1096-0031.1999.tb00268.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1008762742
409 rdf:type schema:CreativeWork
410 https://doi.org/10.1111/j.1096-0031.2007.00173.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1014487936
411 rdf:type schema:CreativeWork
412 https://doi.org/10.1111/j.1096-0031.2008.00217.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1048321372
413 rdf:type schema:CreativeWork
414 https://doi.org/10.1111/j.1463-6409.2006.00267.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1033940500
415 rdf:type schema:CreativeWork
416 https://doi.org/10.1126/science.1122277 schema:sameAs https://app.dimensions.ai/details/publication/pub.1048100892
417 rdf:type schema:CreativeWork
418 https://doi.org/10.1126/science.1840702 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062509890
419 rdf:type schema:CreativeWork
420 https://doi.org/10.1146/annurev.earth.27.1.463 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005869160
421 rdf:type schema:CreativeWork
422 https://doi.org/10.1146/annurev.es.24.110193.002343 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047143680
423 rdf:type schema:CreativeWork
424 https://doi.org/10.1159/000132455 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040870792
425 rdf:type schema:CreativeWork
426 https://doi.org/10.1371/journal.pbio.0040073 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024104985
427 rdf:type schema:CreativeWork
428 https://doi.org/10.1371/journal.pbio.0050207 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029205478
429 rdf:type schema:CreativeWork
430 https://doi.org/10.5962/bhl.title.3290 schema:sameAs https://app.dimensions.ai/details/publication/pub.1099521244
431 rdf:type schema:CreativeWork
432 https://doi.org/10.5962/bhl.title.3434 schema:sameAs https://app.dimensions.ai/details/publication/pub.1099515966
433 rdf:type schema:CreativeWork
434 https://www.grid.ac/institutes/grid.1010.0 schema:alternateName University of Adelaide
435 schema:name Australian Centre for Ancient DNA, School of Earth and Environmental Sciences, University of Adelaide, 5005, Adelaide, SA, Australia
436 rdf:type schema:Organization
437 https://www.grid.ac/institutes/grid.10420.37 schema:alternateName University of Vienna
438 schema:name Department of Paleontology, University of Vienna, 1090, Vienna, Austria
439 rdf:type schema:Organization
440 https://www.grid.ac/institutes/grid.241963.b schema:alternateName American Museum of Natural History
441 schema:name Department of Ecology, Evolution and Environmental Biology, Columbia University, 1200 Amsterdam Avenue, MC555710027, New York, NY, USA
442 Sackler Institute for Comparative Genomics, American Museum of Natural History, Central Park West at 79th Street, 10024, New York, NY, USA
443 rdf:type schema:Organization
444 https://www.grid.ac/institutes/grid.419518.0 schema:alternateName Max Planck Institute for Evolutionary Anthropology
445 schema:name Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, D-04103, Leipzig, Germany
446 rdf:type schema:Organization
447 https://www.grid.ac/institutes/grid.42475.30 schema:alternateName MRC Laboratory of Molecular Biology
448 schema:name MRC Laboratory of Molecular Biology, Hills Road, CB2 2QH, Cambridge, UK
449 rdf:type schema:Organization
450 https://www.grid.ac/institutes/grid.47840.3f schema:alternateName University of California, Berkeley
451 schema:name Department of Integrative Biology, University of California, 94720-3140, Berkeley, CA, USA
452 rdf:type schema:Organization
453 https://www.grid.ac/institutes/grid.48336.3a schema:alternateName National Cancer Institute
454 schema:name Laboratory of Genomic Diversity, National Cancer Institute, 21702-1201, Frederick, MD, USA
455 rdf:type schema:Organization
456 https://www.grid.ac/institutes/grid.70738.3b schema:alternateName University of Alaska Fairbanks
457 schema:name Alaska Quaternary Center, University of Alaska Fairbanks, 99775, Fairbanks, AK, USA
458 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...