Mitogenomic phylogenetic analyses of the Delphinidae with an emphasis on the Globicephalinae View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2011-12

AUTHORS

Julia T Vilstrup, Simon YW Ho, Andrew D Foote, Phillip A Morin, Danielle Kreb, Michael Krützen, Guido J Parra, Kelly M Robertson, Renaud de Stephanis, Philippe Verborgh, Eske Willerslev, Ludovic Orlando, M Thomas P Gilbert

ABSTRACT

BACKGROUND: Previous DNA-based phylogenetic studies of the Delphinidae family suggest it has undergone rapid diversification, as characterised by unresolved and poorly supported taxonomic relationships (polytomies) for some of the species within this group. Using an increased amount of sequence data we test between alternative hypotheses of soft polytomies caused by rapid speciation, slow evolutionary rate and/or insufficient sequence data, and hard polytomies caused by simultaneous speciation within this family. Combining the mitogenome sequences of five new and 12 previously published species within the Delphinidae, we used Bayesian and maximum-likelihood methods to estimate the phylogeny from partitioned and unpartitioned mitogenome sequences. Further ad hoc tests were then conducted to estimate the support for alternative topologies. RESULTS: We found high support for all the relationships within our reconstructed phylogenies, and topologies were consistent between the Bayesian and maximum-likelihood trees inferred from partitioned and unpartitioned data. Resolved relationships included the placement of the killer whale (Orcinus orca) as sister taxon to the rest of the Globicephalinae subfamily, placement of the Risso's dolphin (Grampus griseus) within the Globicephalinae subfamily, removal of the white-beaked dolphin (Lagenorhynchus albirostris) from the Delphininae subfamily and the placement of the rough-toothed dolphin (Steno bredanensis) as sister taxon to the rest of the Delphininae subfamily rather than within the Globicephalinae subfamily. The additional testing of alternative topologies allowed us to reject all other putative relationships, with the exception that we were unable to reject the hypothesis that the relationship between L. albirostris and the Globicephalinae and Delphininae subfamilies was polytomic. CONCLUSION: Despite their rapid diversification, the increased sequence data yielded by mitogenomes enables the resolution of a strongly supported, bifurcating phylogeny, and a chronology of the divergences within the Delphinidae family. This highlights the benefits and potential application of large mitogenome datasets to resolve long-standing phylogenetic uncertainties. More... »

PAGES

65

References to SciGraph publications

  • 2009-12. Testing mitochondrial sequences and anonymous nuclear markers for phylogeny reconstruction in a rapidly radiating group: molecular systematics of the Delphininae (Cetacea: Odontoceti: Delphinidae) in BMC EVOLUTIONARY BIOLOGY
  • 2009-12. Seven new dolphin mitochondrial genomes and a time-calibrated phylogeny of whales in BMC EVOLUTIONARY BIOLOGY
  • 2004-05. Regional climate shifts caused by gradual global cooling in the Pliocene epoch in NATURE
  • 2006-12. Multi-locus phylogeny of dolphins in the subfamily Lissodelphininae: character synergy improves phylogenetic resolution in BMC EVOLUTIONARY BIOLOGY
  • 2009-12. Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution in BMC EVOLUTIONARY BIOLOGY
  • 1982-07. Mitochondrial DNA sequences of primates: Tempo and mode of evolution in JOURNAL OF MOLECULAR EVOLUTION
  • 2007-12. BEAST: Bayesian evolutionary analysis by sampling trees in BMC EVOLUTIONARY BIOLOGY
  • 2002. Applications of Molecular Data in Cetacean Taxonomy and Population Genetics with Special Emphasis on Defining Species Boundaries in MARINE MAMMALS
  • 2010-12. Performance of criteria for selecting evolutionary models in phylogenetics: a comprehensive study based on simulated datasets in BMC EVOLUTIONARY BIOLOGY
  • 2007-12. Dendroscope: An interactive viewer for large phylogenetic trees in BMC BIOINFORMATICS
  • 2006-12. Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified in BMC EVOLUTIONARY BIOLOGY
  • 1986-12. The number of nucleotides required to determine the branching order of three species, with special reference to the human-chimpanzee-gorilla divergence in JOURNAL OF MOLECULAR EVOLUTION
  • 2010-12. A mitogenomic perspective on the ancient, rapid radiation in the Galliformes with an emphasis on the Phasianidae in BMC EVOLUTIONARY BIOLOGY
  • 2008-02. Parallel tagged sequencing on the 454 platform in NATURE PROTOCOLS
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1186/1471-2148-11-65

    DOI

    http://dx.doi.org/10.1186/1471-2148-11-65

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1020795041

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/21392378


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