A database and API for variation, dense genotyping and resequencing data View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2010-12

AUTHORS

Daniel Rios, William M McLaren, Yuan Chen, Ewan Birney, Arne Stabenau, Paul Flicek, Fiona Cunningham

ABSTRACT

BACKGROUND: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale resequencing projects. The 1000 Genomes Project and similar efforts in other species are challenging the methods previously used for storage and manipulation of such data necessitating the redesign of existing genome-wide bioinformatics resources. RESULTS: Ensembl has created a database and software library to support data storage, analysis and access to the existing and emerging variation data from large mammalian and vertebrate genomes. These tools scale to thousands of individual genome sequences and are integrated into the Ensembl infrastructure for genome annotation and visualisation. The database and software system is easily expanded to integrate both public and non-public data sources in the context of an Ensembl software installation and is already being used outside of the Ensembl project in a number of database and application environments. CONCLUSIONS: Ensembl's powerful, flexible and open source infrastructure for the management of variation, genotyping and resequencing data is freely available at http://www.ensembl.org. More... »

PAGES

238

Identifiers

URI

http://scigraph.springernature.com/pub.10.1186/1471-2105-11-238

DOI

http://dx.doi.org/10.1186/1471-2105-11-238

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1047755652

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/20459810


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Databases, Factual", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genome", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genomics", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genotype", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Phenotype", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Sequence Analysis, DNA", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute", 
          "id": "https://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Rios", 
        "givenName": "Daniel", 
        "id": "sg:person.01252352021.72", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01252352021.72"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute", 
          "id": "https://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "McLaren", 
        "givenName": "William M", 
        "id": "sg:person.01261213671.82", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01261213671.82"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute", 
          "id": "https://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Chen", 
        "givenName": "Yuan", 
        "id": "sg:person.01352406103.16", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01352406103.16"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute", 
          "id": "https://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Birney", 
        "givenName": "Ewan", 
        "id": "sg:person.0611446267.37", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0611446267.37"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute", 
          "id": "https://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Stabenau", 
        "givenName": "Arne", 
        "id": "sg:person.01372421406.53", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01372421406.53"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute", 
          "id": "https://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Flicek", 
        "givenName": "Paul", 
        "id": "sg:person.0764542450.95", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0764542450.95"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "European Bioinformatics Institute", 
          "id": "https://www.grid.ac/institutes/grid.225360.0", 
          "name": [
            "European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, Cambridge, UK"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Cunningham", 
        "givenName": "Fiona", 
        "id": "sg:person.01160407014.29", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01160407014.29"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1093/nar/gkm968", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002371756"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.1857204", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004434638"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature05911", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004556449", 
          "https://doi.org/10.1038/nature05911"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2164-11-293", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007878504", 
          "https://doi.org/10.1186/1471-2164-11-293"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/bth457", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008081196"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.194201", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008144266"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkn875", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008449253"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature03001", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013534924", 
          "https://doi.org/10.1038/nature03001"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature03001", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013534924", 
          "https://doi.org/10.1038/nature03001"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.4413105", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017826309"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkp871", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022004472"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1105436", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027070431"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/30.1.387", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027379479"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/ng0407-425", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027556075", 
          "https://doi.org/10.1038/ng0407-425"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4302-0853-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029709420", 
          "https://doi.org/10.1007/978-1-4302-0853-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4302-0853-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029709420", 
          "https://doi.org/10.1007/978-1-4302-0853-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/ng0806-853a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030020906", 
          "https://doi.org/10.1038/ng0806-853a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/ng0806-853a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030020906", 
          "https://doi.org/10.1038/ng0806-853a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkn741", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030509007"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkl953", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032334637"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkn828", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038202091"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkh103", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040312195"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/35057062", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042854081", 
          "https://doi.org/10.1038/35057062"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/35057062", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042854081", 
          "https://doi.org/10.1038/35057062"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/gb-2009-10-5-107", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043335129", 
          "https://doi.org/10.1186/gb-2009-10-5-107"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/35057149", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046153445", 
          "https://doi.org/10.1038/35057149"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/35057149", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046153445", 
          "https://doi.org/10.1038/35057149"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature06258", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051134045", 
          "https://doi.org/10.1038/nature06258"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2164-10-22", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051697715", 
          "https://doi.org/10.1186/1471-2164-10-22"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2010-12", 
    "datePublishedReg": "2010-12-01", 
    "description": "BACKGROUND: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale resequencing projects. The 1000 Genomes Project and similar efforts in other species are challenging the methods previously used for storage and manipulation of such data necessitating the redesign of existing genome-wide bioinformatics resources.\nRESULTS: Ensembl has created a database and software library to support data storage, analysis and access to the existing and emerging variation data from large mammalian and vertebrate genomes. These tools scale to thousands of individual genome sequences and are integrated into the Ensembl infrastructure for genome annotation and visualisation. The database and software system is easily expanded to integrate both public and non-public data sources in the context of an Ensembl software installation and is already being used outside of the Ensembl project in a number of database and application environments.\nCONCLUSIONS: Ensembl's powerful, flexible and open source infrastructure for the management of variation, genotyping and resequencing data is freely available at http://www.ensembl.org.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1186/1471-2105-11-238", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": true, 
    "isPartOf": [
      {
        "id": "sg:journal.1023786", 
        "issn": [
          "1471-2105"
        ], 
        "name": "BMC Bioinformatics", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "11"
      }
    ], 
    "name": "A database and API for variation, dense genotyping and resequencing data", 
    "pagination": "238", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "e37ea8a21fd068e567b8837466fb400ae701d55fb60243b7da5803db2bb95997"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "20459810"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "100965194"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1186/1471-2105-11-238"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1047755652"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1186/1471-2105-11-238", 
      "https://app.dimensions.ai/details/publication/pub.1047755652"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T16:41", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8669_00000507.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1186/1471-2105-11-238"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1186/1471-2105-11-238'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1186/1471-2105-11-238'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1186/1471-2105-11-238'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1186/1471-2105-11-238'


 

This table displays all metadata directly associated to this object as RDF triples.

217 TRIPLES      21 PREDICATES      59 URIs      27 LITERALS      15 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1186/1471-2105-11-238 schema:about N119f17b7e58f4ab69e7f59bbc016601b
2 N1356186264034155b2a6e8772af5bd04
3 N48923e08910a46a69a310ba0f208edbe
4 Nb86021e8bb944742be30aa4a25134fbe
5 Nbce975d9b9a34575b1e8d9980d12a9d6
6 Ncd00d2ac3a6e4c61b3f1b4fcb47887cd
7 anzsrc-for:06
8 anzsrc-for:0604
9 schema:author Na768567ed1a941838ea04ca54e1b6f60
10 schema:citation sg:pub.10.1007/978-1-4302-0853-2
11 sg:pub.10.1038/35057062
12 sg:pub.10.1038/35057149
13 sg:pub.10.1038/nature03001
14 sg:pub.10.1038/nature05911
15 sg:pub.10.1038/nature06258
16 sg:pub.10.1038/ng0407-425
17 sg:pub.10.1038/ng0806-853a
18 sg:pub.10.1186/1471-2164-10-22
19 sg:pub.10.1186/1471-2164-11-293
20 sg:pub.10.1186/gb-2009-10-5-107
21 https://doi.org/10.1093/bioinformatics/bth457
22 https://doi.org/10.1093/nar/30.1.387
23 https://doi.org/10.1093/nar/gkh103
24 https://doi.org/10.1093/nar/gkl953
25 https://doi.org/10.1093/nar/gkm968
26 https://doi.org/10.1093/nar/gkn741
27 https://doi.org/10.1093/nar/gkn828
28 https://doi.org/10.1093/nar/gkn875
29 https://doi.org/10.1093/nar/gkp871
30 https://doi.org/10.1101/gr.1857204
31 https://doi.org/10.1101/gr.194201
32 https://doi.org/10.1101/gr.4413105
33 https://doi.org/10.1126/science.1105436
34 schema:datePublished 2010-12
35 schema:datePublishedReg 2010-12-01
36 schema:description BACKGROUND: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale resequencing projects. The 1000 Genomes Project and similar efforts in other species are challenging the methods previously used for storage and manipulation of such data necessitating the redesign of existing genome-wide bioinformatics resources. RESULTS: Ensembl has created a database and software library to support data storage, analysis and access to the existing and emerging variation data from large mammalian and vertebrate genomes. These tools scale to thousands of individual genome sequences and are integrated into the Ensembl infrastructure for genome annotation and visualisation. The database and software system is easily expanded to integrate both public and non-public data sources in the context of an Ensembl software installation and is already being used outside of the Ensembl project in a number of database and application environments. CONCLUSIONS: Ensembl's powerful, flexible and open source infrastructure for the management of variation, genotyping and resequencing data is freely available at http://www.ensembl.org.
37 schema:genre research_article
38 schema:inLanguage en
39 schema:isAccessibleForFree true
40 schema:isPartOf N60e7bafafc8a4a2ebb1c2199ff9af27d
41 Nc4f15e91d6464b9682c6cf63ab7fa59c
42 sg:journal.1023786
43 schema:name A database and API for variation, dense genotyping and resequencing data
44 schema:pagination 238
45 schema:productId N27638155eb4444908e4c0de2bc38dca4
46 N3ade90af35654a90aaed6313dc888ac1
47 N42c84d46e354424c8aa4a2d577316a61
48 N8ef6809ecba14e3ebcdd8d49e2765f1b
49 N90351cd911054a68bade145f454b09d6
50 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047755652
51 https://doi.org/10.1186/1471-2105-11-238
52 schema:sdDatePublished 2019-04-10T16:41
53 schema:sdLicense https://scigraph.springernature.com/explorer/license/
54 schema:sdPublisher N98aaeeaf62424975b098e7f3472da167
55 schema:url http://link.springer.com/10.1186/1471-2105-11-238
56 sgo:license sg:explorer/license/
57 sgo:sdDataset articles
58 rdf:type schema:ScholarlyArticle
59 N119f17b7e58f4ab69e7f59bbc016601b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
60 schema:name Sequence Analysis, DNA
61 rdf:type schema:DefinedTerm
62 N1356186264034155b2a6e8772af5bd04 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
63 schema:name Genotype
64 rdf:type schema:DefinedTerm
65 N27638155eb4444908e4c0de2bc38dca4 schema:name dimensions_id
66 schema:value pub.1047755652
67 rdf:type schema:PropertyValue
68 N3ade90af35654a90aaed6313dc888ac1 schema:name pubmed_id
69 schema:value 20459810
70 rdf:type schema:PropertyValue
71 N42c84d46e354424c8aa4a2d577316a61 schema:name doi
72 schema:value 10.1186/1471-2105-11-238
73 rdf:type schema:PropertyValue
74 N48923e08910a46a69a310ba0f208edbe schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
75 schema:name Phenotype
76 rdf:type schema:DefinedTerm
77 N60e7bafafc8a4a2ebb1c2199ff9af27d schema:volumeNumber 11
78 rdf:type schema:PublicationVolume
79 N6d97e47bf94540acbc5731936ba0d060 rdf:first sg:person.01352406103.16
80 rdf:rest N708c52d546a4495293f55830b1fdfd3c
81 N708c52d546a4495293f55830b1fdfd3c rdf:first sg:person.0611446267.37
82 rdf:rest Nfa0f3015cec943f98234c5499c5f75f2
83 N8ef6809ecba14e3ebcdd8d49e2765f1b schema:name readcube_id
84 schema:value e37ea8a21fd068e567b8837466fb400ae701d55fb60243b7da5803db2bb95997
85 rdf:type schema:PropertyValue
86 N90351cd911054a68bade145f454b09d6 schema:name nlm_unique_id
87 schema:value 100965194
88 rdf:type schema:PropertyValue
89 N98aaeeaf62424975b098e7f3472da167 schema:name Springer Nature - SN SciGraph project
90 rdf:type schema:Organization
91 Na768567ed1a941838ea04ca54e1b6f60 rdf:first sg:person.01252352021.72
92 rdf:rest Nf373e0447cc14733ac6c430254705841
93 Naf8e8ca721e343e1b05ffba4c756fbf8 rdf:first sg:person.0764542450.95
94 rdf:rest Nd1413af6765a4a76bcff296b6c69607f
95 Nb86021e8bb944742be30aa4a25134fbe schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
96 schema:name Databases, Factual
97 rdf:type schema:DefinedTerm
98 Nbce975d9b9a34575b1e8d9980d12a9d6 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
99 schema:name Genomics
100 rdf:type schema:DefinedTerm
101 Nc4f15e91d6464b9682c6cf63ab7fa59c schema:issueNumber 1
102 rdf:type schema:PublicationIssue
103 Ncd00d2ac3a6e4c61b3f1b4fcb47887cd schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
104 schema:name Genome
105 rdf:type schema:DefinedTerm
106 Nd1413af6765a4a76bcff296b6c69607f rdf:first sg:person.01160407014.29
107 rdf:rest rdf:nil
108 Nf373e0447cc14733ac6c430254705841 rdf:first sg:person.01261213671.82
109 rdf:rest N6d97e47bf94540acbc5731936ba0d060
110 Nfa0f3015cec943f98234c5499c5f75f2 rdf:first sg:person.01372421406.53
111 rdf:rest Naf8e8ca721e343e1b05ffba4c756fbf8
112 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
113 schema:name Biological Sciences
114 rdf:type schema:DefinedTerm
115 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
116 schema:name Genetics
117 rdf:type schema:DefinedTerm
118 sg:journal.1023786 schema:issn 1471-2105
119 schema:name BMC Bioinformatics
120 rdf:type schema:Periodical
121 sg:person.01160407014.29 schema:affiliation https://www.grid.ac/institutes/grid.225360.0
122 schema:familyName Cunningham
123 schema:givenName Fiona
124 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01160407014.29
125 rdf:type schema:Person
126 sg:person.01252352021.72 schema:affiliation https://www.grid.ac/institutes/grid.225360.0
127 schema:familyName Rios
128 schema:givenName Daniel
129 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01252352021.72
130 rdf:type schema:Person
131 sg:person.01261213671.82 schema:affiliation https://www.grid.ac/institutes/grid.225360.0
132 schema:familyName McLaren
133 schema:givenName William M
134 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01261213671.82
135 rdf:type schema:Person
136 sg:person.01352406103.16 schema:affiliation https://www.grid.ac/institutes/grid.225360.0
137 schema:familyName Chen
138 schema:givenName Yuan
139 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01352406103.16
140 rdf:type schema:Person
141 sg:person.01372421406.53 schema:affiliation https://www.grid.ac/institutes/grid.225360.0
142 schema:familyName Stabenau
143 schema:givenName Arne
144 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01372421406.53
145 rdf:type schema:Person
146 sg:person.0611446267.37 schema:affiliation https://www.grid.ac/institutes/grid.225360.0
147 schema:familyName Birney
148 schema:givenName Ewan
149 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0611446267.37
150 rdf:type schema:Person
151 sg:person.0764542450.95 schema:affiliation https://www.grid.ac/institutes/grid.225360.0
152 schema:familyName Flicek
153 schema:givenName Paul
154 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0764542450.95
155 rdf:type schema:Person
156 sg:pub.10.1007/978-1-4302-0853-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029709420
157 https://doi.org/10.1007/978-1-4302-0853-2
158 rdf:type schema:CreativeWork
159 sg:pub.10.1038/35057062 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042854081
160 https://doi.org/10.1038/35057062
161 rdf:type schema:CreativeWork
162 sg:pub.10.1038/35057149 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046153445
163 https://doi.org/10.1038/35057149
164 rdf:type schema:CreativeWork
165 sg:pub.10.1038/nature03001 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013534924
166 https://doi.org/10.1038/nature03001
167 rdf:type schema:CreativeWork
168 sg:pub.10.1038/nature05911 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004556449
169 https://doi.org/10.1038/nature05911
170 rdf:type schema:CreativeWork
171 sg:pub.10.1038/nature06258 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051134045
172 https://doi.org/10.1038/nature06258
173 rdf:type schema:CreativeWork
174 sg:pub.10.1038/ng0407-425 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027556075
175 https://doi.org/10.1038/ng0407-425
176 rdf:type schema:CreativeWork
177 sg:pub.10.1038/ng0806-853a schema:sameAs https://app.dimensions.ai/details/publication/pub.1030020906
178 https://doi.org/10.1038/ng0806-853a
179 rdf:type schema:CreativeWork
180 sg:pub.10.1186/1471-2164-10-22 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051697715
181 https://doi.org/10.1186/1471-2164-10-22
182 rdf:type schema:CreativeWork
183 sg:pub.10.1186/1471-2164-11-293 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007878504
184 https://doi.org/10.1186/1471-2164-11-293
185 rdf:type schema:CreativeWork
186 sg:pub.10.1186/gb-2009-10-5-107 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043335129
187 https://doi.org/10.1186/gb-2009-10-5-107
188 rdf:type schema:CreativeWork
189 https://doi.org/10.1093/bioinformatics/bth457 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008081196
190 rdf:type schema:CreativeWork
191 https://doi.org/10.1093/nar/30.1.387 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027379479
192 rdf:type schema:CreativeWork
193 https://doi.org/10.1093/nar/gkh103 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040312195
194 rdf:type schema:CreativeWork
195 https://doi.org/10.1093/nar/gkl953 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032334637
196 rdf:type schema:CreativeWork
197 https://doi.org/10.1093/nar/gkm968 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002371756
198 rdf:type schema:CreativeWork
199 https://doi.org/10.1093/nar/gkn741 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030509007
200 rdf:type schema:CreativeWork
201 https://doi.org/10.1093/nar/gkn828 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038202091
202 rdf:type schema:CreativeWork
203 https://doi.org/10.1093/nar/gkn875 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008449253
204 rdf:type schema:CreativeWork
205 https://doi.org/10.1093/nar/gkp871 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022004472
206 rdf:type schema:CreativeWork
207 https://doi.org/10.1101/gr.1857204 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004434638
208 rdf:type schema:CreativeWork
209 https://doi.org/10.1101/gr.194201 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008144266
210 rdf:type schema:CreativeWork
211 https://doi.org/10.1101/gr.4413105 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017826309
212 rdf:type schema:CreativeWork
213 https://doi.org/10.1126/science.1105436 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027070431
214 rdf:type schema:CreativeWork
215 https://www.grid.ac/institutes/grid.225360.0 schema:alternateName European Bioinformatics Institute
216 schema:name European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SD, Cambridge, UK
217 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...