Infrastructure for the life sciences: design and implementation of the UniProt website View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2009-12

AUTHORS

Eric Jain, Amos Bairoch, Severine Duvaud, Isabelle Phan, Nicole Redaschi, Baris E Suzek, Maria J Martin, Peter McGarvey, Elisabeth Gasteiger

ABSTRACT

BACKGROUND: The UniProt consortium was formed in 2002 by groups from the Swiss Institute of Bioinformatics (SIB), the European Bioinformatics Institute (EBI) and the Protein Information Resource (PIR) at Georgetown University, and soon afterwards the website http://www.uniprot.org was set up as a central entry point to UniProt resources. Requests to this address were redirected to one of the three organisations' websites. While these sites shared a set of static pages with general information about UniProt, their pages for searching and viewing data were different. To provide users with a consistent view and to cut the cost of maintaining three separate sites, the consortium decided to develop a common website for UniProt. Following several years of intense development and a year of public beta testing, the http://www.uniprot.org domain was switched to the newly developed site described in this paper in July 2008. DESCRIPTION: The UniProt consortium is the main provider of protein sequence and annotation data for much of the life sciences community. The http://www.uniprot.org website is the primary access point to this data and to documentation and basic tools for the data. These tools include full text and field-based text search, similarity search, multiple sequence alignment, batch retrieval and database identifier mapping. This paper discusses the design and implementation of the new website, which was released in July 2008, and shows how it improves data access for users with different levels of experience, as well as to machines for programmatic access.http://www.uniprot.org/ is open for both academic and commercial use. The site was built with open source tools and libraries. Feedback is very welcome and should be sent to help@uniprot.org. CONCLUSION: The new UniProt website makes accessing and understanding UniProt easier than ever. The two main lessons learned are that getting the basics right for such a data provider website has huge benefits, but is not trivial and easy to underestimate, and that there is no substitute for using empirical data throughout the development process to decide on what is and what is not working for your users. More... »

PAGES

136

References to SciGraph publications

  • 1969. Strength of Materials in NONE
  • 2000. wink in COMPUTER SCIENCE AND COMMUNICATIONS DICTIONARY
  • 2008-05. Calling on a million minds for community annotation in WikiProteins in GENOME BIOLOGY
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1186/1471-2105-10-136

    DOI

    http://dx.doi.org/10.1186/1471-2105-10-136

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1049222290

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/19426475


    Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
    Incoming Citations Browse incoming citations for this publication using opencitations.net

    JSON-LD is the canonical representation for SciGraph data.

    TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

    [
      {
        "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
        "about": [
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0806", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Information Systems", 
            "type": "DefinedTerm"
          }, 
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/08", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Information and Computing Sciences", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Databases, Protein", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Information Storage and Retrieval", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Internet", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Proteins", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Sequence Analysis, Protein", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "User-Computer Interface", 
            "type": "DefinedTerm"
          }
        ], 
        "author": [
          {
            "affiliation": {
              "alternateName": "University of Geneva", 
              "id": "https://www.grid.ac/institutes/grid.8591.5", 
              "name": [
                "Swiss-Prot Group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211, Geneva 4, Switzerland"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Jain", 
            "givenName": "Eric", 
            "id": "sg:person.01052030562.52", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01052030562.52"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Geneva", 
              "id": "https://www.grid.ac/institutes/grid.8591.5", 
              "name": [
                "Swiss-Prot Group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211, Geneva 4, Switzerland", 
                "Department of Structural Biology and Bioinformatics, Faculty of Medicine, University of Geneva, 1 Michel Servet, 1211, Geneva 4, Switzerland"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Bairoch", 
            "givenName": "Amos", 
            "id": "sg:person.01076543625.00", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01076543625.00"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Geneva", 
              "id": "https://www.grid.ac/institutes/grid.8591.5", 
              "name": [
                "Swiss-Prot Group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211, Geneva 4, Switzerland"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Duvaud", 
            "givenName": "Severine", 
            "id": "sg:person.01054544177.97", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01054544177.97"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Geneva", 
              "id": "https://www.grid.ac/institutes/grid.8591.5", 
              "name": [
                "Swiss-Prot Group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211, Geneva 4, Switzerland"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Phan", 
            "givenName": "Isabelle", 
            "id": "sg:person.01330505422.73", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01330505422.73"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Geneva", 
              "id": "https://www.grid.ac/institutes/grid.8591.5", 
              "name": [
                "Swiss-Prot Group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211, Geneva 4, Switzerland"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Redaschi", 
            "givenName": "Nicole", 
            "id": "sg:person.01126520477.59", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01126520477.59"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Georgetown University Medical Center", 
              "id": "https://www.grid.ac/institutes/grid.411667.3", 
              "name": [
                "Protein Information Resource (PIR), Georgetown University Medical Center, 3300 Whitehaven Street NW, 20007, Washington, DC, USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Suzek", 
            "givenName": "Baris E", 
            "id": "sg:person.0720412377.26", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0720412377.26"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "name": [
                "The EMBL Outstation \u2013 European Bioinformatics Institute, Wellcome Trust Genome Campus, CB10 1SD, Hinxton, Cambridge, UK"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Martin", 
            "givenName": "Maria J", 
            "id": "sg:person.01007251502.34", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01007251502.34"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Georgetown University Medical Center", 
              "id": "https://www.grid.ac/institutes/grid.411667.3", 
              "name": [
                "Protein Information Resource (PIR), Georgetown University Medical Center, 3300 Whitehaven Street NW, 20007, Washington, DC, USA"
              ], 
              "type": "Organization"
            }, 
            "familyName": "McGarvey", 
            "givenName": "Peter", 
            "id": "sg:person.01073562347.88", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01073562347.88"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Geneva", 
              "id": "https://www.grid.ac/institutes/grid.8591.5", 
              "name": [
                "Swiss-Prot Group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211, Geneva 4, Switzerland"
              ], 
              "type": "Organization"
            }, 
            "familyName": "Gasteiger", 
            "givenName": "Elisabeth", 
            "id": "sg:person.01121116474.21", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01121116474.21"
            ], 
            "type": "Person"
          }
        ], 
        "citation": [
          {
            "id": "sg:pub.10.1186/gb-2008-9-5-r89", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1006978575", 
              "https://doi.org/10.1186/gb-2008-9-5-r89"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/nar/gkm895", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1021686288"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1080/15228950903517415", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1025149648"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/978-1-349-15340-4", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1026160835", 
              "https://doi.org/10.1007/978-1-349-15340-4"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/978-1-349-15340-4", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1026160835", 
              "https://doi.org/10.1007/978-1-349-15340-4"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/1-4020-0613-6_21136", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1033991184", 
              "https://doi.org/10.1007/1-4020-0613-6_21136"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/bib/5.1.39", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1040485115"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/bioinformatics/btl105", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1043381938"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1109/4236.612229", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1061172160"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.5860/choice.45-6841", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1073425801"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1077603669", 
            "type": "CreativeWork"
          }
        ], 
        "datePublished": "2009-12", 
        "datePublishedReg": "2009-12-01", 
        "description": "BACKGROUND: The UniProt consortium was formed in 2002 by groups from the Swiss Institute of Bioinformatics (SIB), the European Bioinformatics Institute (EBI) and the Protein Information Resource (PIR) at Georgetown University, and soon afterwards the website http://www.uniprot.org was set up as a central entry point to UniProt resources. Requests to this address were redirected to one of the three organisations' websites. While these sites shared a set of static pages with general information about UniProt, their pages for searching and viewing data were different. To provide users with a consistent view and to cut the cost of maintaining three separate sites, the consortium decided to develop a common website for UniProt. Following several years of intense development and a year of public beta testing, the http://www.uniprot.org domain was switched to the newly developed site described in this paper in July 2008.\nDESCRIPTION: The UniProt consortium is the main provider of protein sequence and annotation data for much of the life sciences community. The http://www.uniprot.org website is the primary access point to this data and to documentation and basic tools for the data. These tools include full text and field-based text search, similarity search, multiple sequence alignment, batch retrieval and database identifier mapping. This paper discusses the design and implementation of the new website, which was released in July 2008, and shows how it improves data access for users with different levels of experience, as well as to machines for programmatic access.http://www.uniprot.org/ is open for both academic and commercial use. The site was built with open source tools and libraries. Feedback is very welcome and should be sent to help@uniprot.org.\nCONCLUSION: The new UniProt website makes accessing and understanding UniProt easier than ever. The two main lessons learned are that getting the basics right for such a data provider website has huge benefits, but is not trivial and easy to underestimate, and that there is no substitute for using empirical data throughout the development process to decide on what is and what is not working for your users.", 
        "genre": "research_article", 
        "id": "sg:pub.10.1186/1471-2105-10-136", 
        "inLanguage": [
          "en"
        ], 
        "isAccessibleForFree": true, 
        "isFundedItemOf": [
          {
            "id": "sg:grant.2691217", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.3762696", 
            "type": "MonetaryGrant"
          }
        ], 
        "isPartOf": [
          {
            "id": "sg:journal.1023786", 
            "issn": [
              "1471-2105"
            ], 
            "name": "BMC Bioinformatics", 
            "type": "Periodical"
          }, 
          {
            "issueNumber": "1", 
            "type": "PublicationIssue"
          }, 
          {
            "type": "PublicationVolume", 
            "volumeNumber": "10"
          }
        ], 
        "name": "Infrastructure for the life sciences: design and implementation of the UniProt website", 
        "pagination": "136", 
        "productId": [
          {
            "name": "readcube_id", 
            "type": "PropertyValue", 
            "value": [
              "ea7bfe6cbc88af08e2bee01dcea8b4c116f9278d3f18123579ee235e773bdd7e"
            ]
          }, 
          {
            "name": "pubmed_id", 
            "type": "PropertyValue", 
            "value": [
              "19426475"
            ]
          }, 
          {
            "name": "nlm_unique_id", 
            "type": "PropertyValue", 
            "value": [
              "100965194"
            ]
          }, 
          {
            "name": "doi", 
            "type": "PropertyValue", 
            "value": [
              "10.1186/1471-2105-10-136"
            ]
          }, 
          {
            "name": "dimensions_id", 
            "type": "PropertyValue", 
            "value": [
              "pub.1049222290"
            ]
          }
        ], 
        "sameAs": [
          "https://doi.org/10.1186/1471-2105-10-136", 
          "https://app.dimensions.ai/details/publication/pub.1049222290"
        ], 
        "sdDataset": "articles", 
        "sdDatePublished": "2019-04-11T00:15", 
        "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
        "sdPublisher": {
          "name": "Springer Nature - SN SciGraph project", 
          "type": "Organization"
        }, 
        "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8695_00000508.jsonl", 
        "type": "ScholarlyArticle", 
        "url": "http://link.springer.com/10.1186/1471-2105-10-136"
      }
    ]
     

    Download the RDF metadata as:  json-ld nt turtle xml License info

    HOW TO GET THIS DATA PROGRAMMATICALLY:

    JSON-LD is a popular format for linked data which is fully compatible with JSON.

    curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1186/1471-2105-10-136'

    N-Triples is a line-based linked data format ideal for batch operations.

    curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1186/1471-2105-10-136'

    Turtle is a human-readable linked data format.

    curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1186/1471-2105-10-136'

    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1186/1471-2105-10-136'


     

    This table displays all metadata directly associated to this object as RDF triples.

    190 TRIPLES      21 PREDICATES      45 URIs      27 LITERALS      15 BLANK NODES

    Subject Predicate Object
    1 sg:pub.10.1186/1471-2105-10-136 schema:about N272390bf19794578be6c6186fbae2560
    2 N4bf62e618d38411ba9dec7d802482e0d
    3 N945e745f2eed4d4f9ee6613f83c8a21c
    4 N9cbb4633dd31445fba2bf98b99cf679b
    5 Na01173067d6242ad8d8b5d50070c52a8
    6 Na37f627ba70a42318a009338b8fb845d
    7 anzsrc-for:08
    8 anzsrc-for:0806
    9 schema:author Ne553ee75ea5f40c1ae8fd8383dd51ca0
    10 schema:citation sg:pub.10.1007/1-4020-0613-6_21136
    11 sg:pub.10.1007/978-1-349-15340-4
    12 sg:pub.10.1186/gb-2008-9-5-r89
    13 https://app.dimensions.ai/details/publication/pub.1077603669
    14 https://doi.org/10.1080/15228950903517415
    15 https://doi.org/10.1093/bib/5.1.39
    16 https://doi.org/10.1093/bioinformatics/btl105
    17 https://doi.org/10.1093/nar/gkm895
    18 https://doi.org/10.1109/4236.612229
    19 https://doi.org/10.5860/choice.45-6841
    20 schema:datePublished 2009-12
    21 schema:datePublishedReg 2009-12-01
    22 schema:description BACKGROUND: The UniProt consortium was formed in 2002 by groups from the Swiss Institute of Bioinformatics (SIB), the European Bioinformatics Institute (EBI) and the Protein Information Resource (PIR) at Georgetown University, and soon afterwards the website http://www.uniprot.org was set up as a central entry point to UniProt resources. Requests to this address were redirected to one of the three organisations' websites. While these sites shared a set of static pages with general information about UniProt, their pages for searching and viewing data were different. To provide users with a consistent view and to cut the cost of maintaining three separate sites, the consortium decided to develop a common website for UniProt. Following several years of intense development and a year of public beta testing, the http://www.uniprot.org domain was switched to the newly developed site described in this paper in July 2008. DESCRIPTION: The UniProt consortium is the main provider of protein sequence and annotation data for much of the life sciences community. The http://www.uniprot.org website is the primary access point to this data and to documentation and basic tools for the data. These tools include full text and field-based text search, similarity search, multiple sequence alignment, batch retrieval and database identifier mapping. This paper discusses the design and implementation of the new website, which was released in July 2008, and shows how it improves data access for users with different levels of experience, as well as to machines for programmatic access.http://www.uniprot.org/ is open for both academic and commercial use. The site was built with open source tools and libraries. Feedback is very welcome and should be sent to help@uniprot.org. CONCLUSION: The new UniProt website makes accessing and understanding UniProt easier than ever. The two main lessons learned are that getting the basics right for such a data provider website has huge benefits, but is not trivial and easy to underestimate, and that there is no substitute for using empirical data throughout the development process to decide on what is and what is not working for your users.
    23 schema:genre research_article
    24 schema:inLanguage en
    25 schema:isAccessibleForFree true
    26 schema:isPartOf N05a61c145cf6408586e50a95df3dda8c
    27 N39144b0ce39e4031a55972d873e6c739
    28 sg:journal.1023786
    29 schema:name Infrastructure for the life sciences: design and implementation of the UniProt website
    30 schema:pagination 136
    31 schema:productId N0fe3cf839dfc41b6897dbadb05a3c0da
    32 N2474832de86545a99a6afa4f949beaf1
    33 N4c6ab5bdb62247c0aea89f445f8dc216
    34 N693839cd553748feb99568137de964b9
    35 Na2072e9893b743d0bd09d3f57662b696
    36 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049222290
    37 https://doi.org/10.1186/1471-2105-10-136
    38 schema:sdDatePublished 2019-04-11T00:15
    39 schema:sdLicense https://scigraph.springernature.com/explorer/license/
    40 schema:sdPublisher N093e86db11a14fb385b7e3f4fcc3ead9
    41 schema:url http://link.springer.com/10.1186/1471-2105-10-136
    42 sgo:license sg:explorer/license/
    43 sgo:sdDataset articles
    44 rdf:type schema:ScholarlyArticle
    45 N031dc61108d14105b8e1d7dce8565d68 rdf:first sg:person.01121116474.21
    46 rdf:rest rdf:nil
    47 N05a61c145cf6408586e50a95df3dda8c schema:issueNumber 1
    48 rdf:type schema:PublicationIssue
    49 N093e86db11a14fb385b7e3f4fcc3ead9 schema:name Springer Nature - SN SciGraph project
    50 rdf:type schema:Organization
    51 N0fe3cf839dfc41b6897dbadb05a3c0da schema:name dimensions_id
    52 schema:value pub.1049222290
    53 rdf:type schema:PropertyValue
    54 N1a9b4de01ede4c439bf47a520e92ae07 schema:name The EMBL Outstation – European Bioinformatics Institute, Wellcome Trust Genome Campus, CB10 1SD, Hinxton, Cambridge, UK
    55 rdf:type schema:Organization
    56 N1bf2ef98d49d4b4d8b825cfd5e02d272 rdf:first sg:person.0720412377.26
    57 rdf:rest Ncd901e7878dc4ea589cb178d8623ec89
    58 N2474832de86545a99a6afa4f949beaf1 schema:name doi
    59 schema:value 10.1186/1471-2105-10-136
    60 rdf:type schema:PropertyValue
    61 N272390bf19794578be6c6186fbae2560 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    62 schema:name Proteins
    63 rdf:type schema:DefinedTerm
    64 N35bbdfea71fc4ba2b88b88cc19ff2b5c rdf:first sg:person.01054544177.97
    65 rdf:rest N9ed86c846b1f4176b94c4cb597230434
    66 N39144b0ce39e4031a55972d873e6c739 schema:volumeNumber 10
    67 rdf:type schema:PublicationVolume
    68 N4bf62e618d38411ba9dec7d802482e0d schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    69 schema:name Information Storage and Retrieval
    70 rdf:type schema:DefinedTerm
    71 N4c6ab5bdb62247c0aea89f445f8dc216 schema:name pubmed_id
    72 schema:value 19426475
    73 rdf:type schema:PropertyValue
    74 N693839cd553748feb99568137de964b9 schema:name readcube_id
    75 schema:value ea7bfe6cbc88af08e2bee01dcea8b4c116f9278d3f18123579ee235e773bdd7e
    76 rdf:type schema:PropertyValue
    77 N945e745f2eed4d4f9ee6613f83c8a21c schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    78 schema:name Internet
    79 rdf:type schema:DefinedTerm
    80 N9cbb4633dd31445fba2bf98b99cf679b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    81 schema:name Sequence Analysis, Protein
    82 rdf:type schema:DefinedTerm
    83 N9ed86c846b1f4176b94c4cb597230434 rdf:first sg:person.01330505422.73
    84 rdf:rest Na1add8301a0448808cdd0e00e8d644ef
    85 Na01173067d6242ad8d8b5d50070c52a8 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    86 schema:name User-Computer Interface
    87 rdf:type schema:DefinedTerm
    88 Na1add8301a0448808cdd0e00e8d644ef rdf:first sg:person.01126520477.59
    89 rdf:rest N1bf2ef98d49d4b4d8b825cfd5e02d272
    90 Na2072e9893b743d0bd09d3f57662b696 schema:name nlm_unique_id
    91 schema:value 100965194
    92 rdf:type schema:PropertyValue
    93 Na37f627ba70a42318a009338b8fb845d schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    94 schema:name Databases, Protein
    95 rdf:type schema:DefinedTerm
    96 Ncd901e7878dc4ea589cb178d8623ec89 rdf:first sg:person.01007251502.34
    97 rdf:rest Ne3653b78e9d647ac8cc0d9071cb7be58
    98 Ne3653b78e9d647ac8cc0d9071cb7be58 rdf:first sg:person.01073562347.88
    99 rdf:rest N031dc61108d14105b8e1d7dce8565d68
    100 Ne553ee75ea5f40c1ae8fd8383dd51ca0 rdf:first sg:person.01052030562.52
    101 rdf:rest Nf6a39f0abadb4ef0bbd97bc7dc714580
    102 Nf6a39f0abadb4ef0bbd97bc7dc714580 rdf:first sg:person.01076543625.00
    103 rdf:rest N35bbdfea71fc4ba2b88b88cc19ff2b5c
    104 anzsrc-for:08 schema:inDefinedTermSet anzsrc-for:
    105 schema:name Information and Computing Sciences
    106 rdf:type schema:DefinedTerm
    107 anzsrc-for:0806 schema:inDefinedTermSet anzsrc-for:
    108 schema:name Information Systems
    109 rdf:type schema:DefinedTerm
    110 sg:grant.2691217 http://pending.schema.org/fundedItem sg:pub.10.1186/1471-2105-10-136
    111 rdf:type schema:MonetaryGrant
    112 sg:grant.3762696 http://pending.schema.org/fundedItem sg:pub.10.1186/1471-2105-10-136
    113 rdf:type schema:MonetaryGrant
    114 sg:journal.1023786 schema:issn 1471-2105
    115 schema:name BMC Bioinformatics
    116 rdf:type schema:Periodical
    117 sg:person.01007251502.34 schema:affiliation N1a9b4de01ede4c439bf47a520e92ae07
    118 schema:familyName Martin
    119 schema:givenName Maria J
    120 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01007251502.34
    121 rdf:type schema:Person
    122 sg:person.01052030562.52 schema:affiliation https://www.grid.ac/institutes/grid.8591.5
    123 schema:familyName Jain
    124 schema:givenName Eric
    125 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01052030562.52
    126 rdf:type schema:Person
    127 sg:person.01054544177.97 schema:affiliation https://www.grid.ac/institutes/grid.8591.5
    128 schema:familyName Duvaud
    129 schema:givenName Severine
    130 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01054544177.97
    131 rdf:type schema:Person
    132 sg:person.01073562347.88 schema:affiliation https://www.grid.ac/institutes/grid.411667.3
    133 schema:familyName McGarvey
    134 schema:givenName Peter
    135 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01073562347.88
    136 rdf:type schema:Person
    137 sg:person.01076543625.00 schema:affiliation https://www.grid.ac/institutes/grid.8591.5
    138 schema:familyName Bairoch
    139 schema:givenName Amos
    140 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01076543625.00
    141 rdf:type schema:Person
    142 sg:person.01121116474.21 schema:affiliation https://www.grid.ac/institutes/grid.8591.5
    143 schema:familyName Gasteiger
    144 schema:givenName Elisabeth
    145 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01121116474.21
    146 rdf:type schema:Person
    147 sg:person.01126520477.59 schema:affiliation https://www.grid.ac/institutes/grid.8591.5
    148 schema:familyName Redaschi
    149 schema:givenName Nicole
    150 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01126520477.59
    151 rdf:type schema:Person
    152 sg:person.01330505422.73 schema:affiliation https://www.grid.ac/institutes/grid.8591.5
    153 schema:familyName Phan
    154 schema:givenName Isabelle
    155 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01330505422.73
    156 rdf:type schema:Person
    157 sg:person.0720412377.26 schema:affiliation https://www.grid.ac/institutes/grid.411667.3
    158 schema:familyName Suzek
    159 schema:givenName Baris E
    160 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0720412377.26
    161 rdf:type schema:Person
    162 sg:pub.10.1007/1-4020-0613-6_21136 schema:sameAs https://app.dimensions.ai/details/publication/pub.1033991184
    163 https://doi.org/10.1007/1-4020-0613-6_21136
    164 rdf:type schema:CreativeWork
    165 sg:pub.10.1007/978-1-349-15340-4 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026160835
    166 https://doi.org/10.1007/978-1-349-15340-4
    167 rdf:type schema:CreativeWork
    168 sg:pub.10.1186/gb-2008-9-5-r89 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006978575
    169 https://doi.org/10.1186/gb-2008-9-5-r89
    170 rdf:type schema:CreativeWork
    171 https://app.dimensions.ai/details/publication/pub.1077603669 schema:CreativeWork
    172 https://doi.org/10.1080/15228950903517415 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025149648
    173 rdf:type schema:CreativeWork
    174 https://doi.org/10.1093/bib/5.1.39 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040485115
    175 rdf:type schema:CreativeWork
    176 https://doi.org/10.1093/bioinformatics/btl105 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043381938
    177 rdf:type schema:CreativeWork
    178 https://doi.org/10.1093/nar/gkm895 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021686288
    179 rdf:type schema:CreativeWork
    180 https://doi.org/10.1109/4236.612229 schema:sameAs https://app.dimensions.ai/details/publication/pub.1061172160
    181 rdf:type schema:CreativeWork
    182 https://doi.org/10.5860/choice.45-6841 schema:sameAs https://app.dimensions.ai/details/publication/pub.1073425801
    183 rdf:type schema:CreativeWork
    184 https://www.grid.ac/institutes/grid.411667.3 schema:alternateName Georgetown University Medical Center
    185 schema:name Protein Information Resource (PIR), Georgetown University Medical Center, 3300 Whitehaven Street NW, 20007, Washington, DC, USA
    186 rdf:type schema:Organization
    187 https://www.grid.ac/institutes/grid.8591.5 schema:alternateName University of Geneva
    188 schema:name Department of Structural Biology and Bioinformatics, Faculty of Medicine, University of Geneva, 1 Michel Servet, 1211, Geneva 4, Switzerland
    189 Swiss-Prot Group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211, Geneva 4, Switzerland
    190 rdf:type schema:Organization
     




    Preview window. Press ESC to close (or click here)


    ...