Membrane-Bound Bacteriophytochrome-Like Complex of Phototrophic Purple Non-Sulfur Bacterium Rhodopseudomonas palustris View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2018-09

AUTHORS

O. P. Serdyuk, L. D. Smolygina, M. S. Khristin

ABSTRACT

A pigment-protein complex of yellow color with absorption maxima at 682 and 776 nm, characteristic for bacteriophytochromes, was isolated from the photosynthetic membranes of the purple bacterium Rhodopseudomonas palustris. Zinc-induced fluorescence of the complex indicated the presence of the biliverdin chromophore covalently bound to the protein. The parameters of low-temperature fluorescence (λ excitation at 680 nm, λ emission at 695 nm) indicated the ability of the complex to undergo photoconversion. These data, as well as the kinetics of accumulation of the red (Pr)-form on far red light, allowed the complex to be classified as a bacteriophytochrome-like complex with its localization in the photosynthetic membranes of Rps. palustris. More... »

PAGES

284-287

Identifiers

URI

http://scigraph.springernature.com/pub.10.1134/s1607672918050149

DOI

http://dx.doi.org/10.1134/s1607672918050149

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1108039714

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/30397894


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0601", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biochemistry and Cell Biology", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Institute of Basic Biological Problems", 
          "id": "https://www.grid.ac/institutes/grid.418820.7", 
          "name": [
            "Institute of Basic Biological Problems, Russian Academy of Sciences, 142290, Pushchino, Moscow oblast, Russia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Serdyuk", 
        "givenName": "O. P.", 
        "id": "sg:person.01137711733.03", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01137711733.03"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute of Basic Biological Problems", 
          "id": "https://www.grid.ac/institutes/grid.418820.7", 
          "name": [
            "Institute of Basic Biological Problems, Russian Academy of Sciences, 142290, Pushchino, Moscow oblast, Russia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Smolygina", 
        "givenName": "L. D.", 
        "id": "sg:person.01254140333.17", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01254140333.17"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute of Basic Biological Problems", 
          "id": "https://www.grid.ac/institutes/grid.418820.7", 
          "name": [
            "Institute of Basic Biological Problems, Russian Academy of Sciences, 142290, Pushchino, Moscow oblast, Russia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Khristin", 
        "givenName": "M. S.", 
        "id": "sg:person.01206346456.59", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01206346456.59"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1007/s11120-008-9323-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000470562", 
          "https://doi.org/10.1007/s11120-008-9323-0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1074/jbc.m506890200", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003304240"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1074/jbc.m506890200", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003304240"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.bbabio.2007.09.003", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007564025"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/cphc.200900894", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1009622908"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/cphc.200900894", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1009622908"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0003-2697(65)90332-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013289038"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/jcp.1030490104", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018063516"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.bpj.2016.10.017", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019175666"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.bpj.2016.10.017", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019175666"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.bpj.2016.10.017", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019175666"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1042/bj20050826", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028948134"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1042/bj20050826", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028948134"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/414776a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029008178", 
          "https://doi.org/10.1038/414776a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/414776a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029008178", 
          "https://doi.org/10.1038/414776a"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00284-010-9634-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032626745", 
          "https://doi.org/10.1007/s00284-010-9634-1"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00284-010-9634-1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032626745", 
          "https://doi.org/10.1007/s00284-010-9634-1"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1038/sj.emboj.7601770", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1047052883"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1322410111", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051953828"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jmb.2006.09.045", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052372847"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1080355911", 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2018-09", 
    "datePublishedReg": "2018-09-01", 
    "description": "A pigment-protein complex of yellow color with absorption maxima at 682 and 776 nm, characteristic for bacteriophytochromes, was isolated from the photosynthetic membranes of the purple bacterium Rhodopseudomonas palustris. Zinc-induced fluorescence of the complex indicated the presence of the biliverdin chromophore covalently bound to the protein. The parameters of low-temperature fluorescence (\u03bb excitation at 680 nm, \u03bb emission at 695 nm) indicated the ability of the complex to undergo photoconversion. These data, as well as the kinetics of accumulation of the red (Pr)-form on far red light, allowed the complex to be classified as a bacteriophytochrome-like complex with its localization in the photosynthetic membranes of Rps. palustris.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1134/s1607672918050149", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1029894", 
        "issn": [
          "1607-6729", 
          "1608-3091"
        ], 
        "name": "Doklady Biochemistry and Biophysics", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "482"
      }
    ], 
    "name": "Membrane-Bound Bacteriophytochrome-Like Complex of Phototrophic Purple Non-Sulfur Bacterium Rhodopseudomonas palustris", 
    "pagination": "284-287", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "bdd04941463a83873e7baa450336dae7fd6caa7f2b0cba2b473d729774a4daec"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "30397894"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "101126895"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1134/s1607672918050149"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1108039714"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1134/s1607672918050149", 
      "https://app.dimensions.ai/details/publication/pub.1108039714"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T20:11", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8681_00000610.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://link.springer.com/10.1134%2FS1607672918050149"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1134/s1607672918050149'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1134/s1607672918050149'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1134/s1607672918050149'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1134/s1607672918050149'


 

This table displays all metadata directly associated to this object as RDF triples.

127 TRIPLES      21 PREDICATES      43 URIs      21 LITERALS      9 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1134/s1607672918050149 schema:about anzsrc-for:06
2 anzsrc-for:0601
3 schema:author N03347c1dec1b4f0482a994f05770a455
4 schema:citation sg:pub.10.1007/s00284-010-9634-1
5 sg:pub.10.1007/s11120-008-9323-0
6 sg:pub.10.1038/414776a
7 https://app.dimensions.ai/details/publication/pub.1080355911
8 https://doi.org/10.1002/cphc.200900894
9 https://doi.org/10.1002/jcp.1030490104
10 https://doi.org/10.1016/0003-2697(65)90332-5
11 https://doi.org/10.1016/j.bbabio.2007.09.003
12 https://doi.org/10.1016/j.bpj.2016.10.017
13 https://doi.org/10.1016/j.jmb.2006.09.045
14 https://doi.org/10.1038/sj.emboj.7601770
15 https://doi.org/10.1042/bj20050826
16 https://doi.org/10.1073/pnas.1322410111
17 https://doi.org/10.1074/jbc.m506890200
18 schema:datePublished 2018-09
19 schema:datePublishedReg 2018-09-01
20 schema:description A pigment-protein complex of yellow color with absorption maxima at 682 and 776 nm, characteristic for bacteriophytochromes, was isolated from the photosynthetic membranes of the purple bacterium Rhodopseudomonas palustris. Zinc-induced fluorescence of the complex indicated the presence of the biliverdin chromophore covalently bound to the protein. The parameters of low-temperature fluorescence (λ excitation at 680 nm, λ emission at 695 nm) indicated the ability of the complex to undergo photoconversion. These data, as well as the kinetics of accumulation of the red (Pr)-form on far red light, allowed the complex to be classified as a bacteriophytochrome-like complex with its localization in the photosynthetic membranes of Rps. palustris.
21 schema:genre research_article
22 schema:inLanguage en
23 schema:isAccessibleForFree false
24 schema:isPartOf N97d3d5f5432141e590dd40f38cf25665
25 Nd6d780f67ac448d89788d3811eb8ad09
26 sg:journal.1029894
27 schema:name Membrane-Bound Bacteriophytochrome-Like Complex of Phototrophic Purple Non-Sulfur Bacterium Rhodopseudomonas palustris
28 schema:pagination 284-287
29 schema:productId N93ce2e9e69854a7d83cea9387e0994c9
30 Nba7a4a75f4bf45b8a6fce9a4478f4561
31 Nc4056510c4fb496ba9d40d9683e0d701
32 Ncbcbc5cd3f97430c9a96d6c9ca3fda0c
33 Ne923d0b237a84905b5e2ec16b8415bba
34 schema:sameAs https://app.dimensions.ai/details/publication/pub.1108039714
35 https://doi.org/10.1134/s1607672918050149
36 schema:sdDatePublished 2019-04-10T20:11
37 schema:sdLicense https://scigraph.springernature.com/explorer/license/
38 schema:sdPublisher Nb291384300e945f8bbbb28d99a3cc6fc
39 schema:url https://link.springer.com/10.1134%2FS1607672918050149
40 sgo:license sg:explorer/license/
41 sgo:sdDataset articles
42 rdf:type schema:ScholarlyArticle
43 N008884de6abf4bd69a4f27288d59883b rdf:first sg:person.01254140333.17
44 rdf:rest Nd6e629dd20804e3bb7c5714ec92ebf1e
45 N03347c1dec1b4f0482a994f05770a455 rdf:first sg:person.01137711733.03
46 rdf:rest N008884de6abf4bd69a4f27288d59883b
47 N93ce2e9e69854a7d83cea9387e0994c9 schema:name doi
48 schema:value 10.1134/s1607672918050149
49 rdf:type schema:PropertyValue
50 N97d3d5f5432141e590dd40f38cf25665 schema:issueNumber 1
51 rdf:type schema:PublicationIssue
52 Nb291384300e945f8bbbb28d99a3cc6fc schema:name Springer Nature - SN SciGraph project
53 rdf:type schema:Organization
54 Nba7a4a75f4bf45b8a6fce9a4478f4561 schema:name dimensions_id
55 schema:value pub.1108039714
56 rdf:type schema:PropertyValue
57 Nc4056510c4fb496ba9d40d9683e0d701 schema:name pubmed_id
58 schema:value 30397894
59 rdf:type schema:PropertyValue
60 Ncbcbc5cd3f97430c9a96d6c9ca3fda0c schema:name nlm_unique_id
61 schema:value 101126895
62 rdf:type schema:PropertyValue
63 Nd6d780f67ac448d89788d3811eb8ad09 schema:volumeNumber 482
64 rdf:type schema:PublicationVolume
65 Nd6e629dd20804e3bb7c5714ec92ebf1e rdf:first sg:person.01206346456.59
66 rdf:rest rdf:nil
67 Ne923d0b237a84905b5e2ec16b8415bba schema:name readcube_id
68 schema:value bdd04941463a83873e7baa450336dae7fd6caa7f2b0cba2b473d729774a4daec
69 rdf:type schema:PropertyValue
70 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
71 schema:name Biological Sciences
72 rdf:type schema:DefinedTerm
73 anzsrc-for:0601 schema:inDefinedTermSet anzsrc-for:
74 schema:name Biochemistry and Cell Biology
75 rdf:type schema:DefinedTerm
76 sg:journal.1029894 schema:issn 1607-6729
77 1608-3091
78 schema:name Doklady Biochemistry and Biophysics
79 rdf:type schema:Periodical
80 sg:person.01137711733.03 schema:affiliation https://www.grid.ac/institutes/grid.418820.7
81 schema:familyName Serdyuk
82 schema:givenName O. P.
83 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01137711733.03
84 rdf:type schema:Person
85 sg:person.01206346456.59 schema:affiliation https://www.grid.ac/institutes/grid.418820.7
86 schema:familyName Khristin
87 schema:givenName M. S.
88 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01206346456.59
89 rdf:type schema:Person
90 sg:person.01254140333.17 schema:affiliation https://www.grid.ac/institutes/grid.418820.7
91 schema:familyName Smolygina
92 schema:givenName L. D.
93 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01254140333.17
94 rdf:type schema:Person
95 sg:pub.10.1007/s00284-010-9634-1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032626745
96 https://doi.org/10.1007/s00284-010-9634-1
97 rdf:type schema:CreativeWork
98 sg:pub.10.1007/s11120-008-9323-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000470562
99 https://doi.org/10.1007/s11120-008-9323-0
100 rdf:type schema:CreativeWork
101 sg:pub.10.1038/414776a schema:sameAs https://app.dimensions.ai/details/publication/pub.1029008178
102 https://doi.org/10.1038/414776a
103 rdf:type schema:CreativeWork
104 https://app.dimensions.ai/details/publication/pub.1080355911 schema:CreativeWork
105 https://doi.org/10.1002/cphc.200900894 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009622908
106 rdf:type schema:CreativeWork
107 https://doi.org/10.1002/jcp.1030490104 schema:sameAs https://app.dimensions.ai/details/publication/pub.1018063516
108 rdf:type schema:CreativeWork
109 https://doi.org/10.1016/0003-2697(65)90332-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013289038
110 rdf:type schema:CreativeWork
111 https://doi.org/10.1016/j.bbabio.2007.09.003 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007564025
112 rdf:type schema:CreativeWork
113 https://doi.org/10.1016/j.bpj.2016.10.017 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019175666
114 rdf:type schema:CreativeWork
115 https://doi.org/10.1016/j.jmb.2006.09.045 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052372847
116 rdf:type schema:CreativeWork
117 https://doi.org/10.1038/sj.emboj.7601770 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047052883
118 rdf:type schema:CreativeWork
119 https://doi.org/10.1042/bj20050826 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028948134
120 rdf:type schema:CreativeWork
121 https://doi.org/10.1073/pnas.1322410111 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051953828
122 rdf:type schema:CreativeWork
123 https://doi.org/10.1074/jbc.m506890200 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003304240
124 rdf:type schema:CreativeWork
125 https://www.grid.ac/institutes/grid.418820.7 schema:alternateName Institute of Basic Biological Problems
126 schema:name Institute of Basic Biological Problems, Russian Academy of Sciences, 142290, Pushchino, Moscow oblast, Russia
127 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...