Search of tandem repeats with insertion and deletions in the A. thaliana genome View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2017-11

AUTHORS

E. V. Korotkov, Yu. M. Suvorova, K. G. Skryabin

ABSTRACT

A new mathematical method was used for the first time to search for tandem repeats with insertions and deletions in the full-length sequence of the A. thaliana genome. The method is based on a new algorithm for multiple alignment of sequences of certain periods without using paired comparisons of sequences. We identified 13997 periodic sites 2 to 50 characters long, only approximately 30% of which were known earlier. The possible origin and use of the identified sites with tandem repeats are discussed. More... »

PAGES

398-400

Journal

TITLE

Doklady Biochemistry and Biophysics

ISSUE

1

VOLUME

477

Author Affiliations

Identifiers

URI

http://scigraph.springernature.com/pub.10.1134/s160767291706014x

DOI

http://dx.doi.org/10.1134/s160767291706014x

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1100153083

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/29297128


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