The Role of CLAMP Binding Sites in Maintaining of Distant Interactions in Drosophila Transgenic Lines View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2021-10-12

AUTHORS

E. A. Tikhonova, V. A. Mogila, P. G. Georgiev, O. G. Maksimenko

ABSTRACT

The mechanism of specific recruitment of the dosage compensation complex (DCC) to the X chromosome of male Drosophila remains an unresolved problem. Recently, a DNA-binding protein CLAMP, which binds to the primary chromosome entry sites (CESs) of the DCC, has been described as a factor involved in X chromosome recruiting of DCC. It has been shown that CESs can recruit DCC to autosomes. In this work, we studied the ability of a well-described CES to support distant interactions in model transgenic Drosophila lines. Negative results were obtained showing that the CES that is bound by CLAMP protein does not support distance interactions. More... »

PAGES

1229-1232

Identifiers

URI

http://scigraph.springernature.com/pub.10.1134/s1022795421100124

DOI

http://dx.doi.org/10.1134/s1022795421100124

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1141796808


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0601", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biochemistry and Cell Biology", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia", 
          "id": "http://www.grid.ac/institutes/grid.419021.f", 
          "name": [
            "Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Tikhonova", 
        "givenName": "E. A.", 
        "id": "sg:person.013202451310.93", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013202451310.93"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia", 
          "id": "http://www.grid.ac/institutes/grid.419021.f", 
          "name": [
            "Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Mogila", 
        "givenName": "V. A.", 
        "id": "sg:person.015613670534.82", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015613670534.82"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia", 
          "id": "http://www.grid.ac/institutes/grid.419021.f", 
          "name": [
            "Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Georgiev", 
        "givenName": "P. G.", 
        "id": "sg:person.0710325110.19", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0710325110.19"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia", 
          "id": "http://www.grid.ac/institutes/grid.419021.f", 
          "name": [
            "Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Maksimenko", 
        "givenName": "O. G.", 
        "id": "sg:person.01221260553.28", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01221260553.28"
        ], 
        "type": "Person"
      }
    ], 
    "datePublished": "2021-10-12", 
    "datePublishedReg": "2021-10-12", 
    "description": "The mechanism of specific recruitment of the dosage compensation complex (DCC) to the X chromosome of male Drosophila remains an unresolved problem. Recently, a DNA-binding protein CLAMP, which binds to the primary chromosome entry sites (CESs) of the DCC, has been described as a factor involved in X chromosome recruiting of DCC. It has been shown that CESs can recruit DCC to autosomes. In this work, we studied the ability of a well-described CES to support distant interactions in model transgenic Drosophila lines. Negative results were obtained showing that the CES that is bound by CLAMP protein does not support distance interactions.", 
    "genre": "article", 
    "id": "sg:pub.10.1134/s1022795421100124", 
    "inLanguage": "en", 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1319770", 
        "issn": [
          "1022-7954", 
          "1608-3369"
        ], 
        "name": "Russian Journal of Genetics", 
        "publisher": "Pleiades Publishing", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "10", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "57"
      }
    ], 
    "keywords": [
      "dosage compensation complex", 
      "transgenic Drosophila lines", 
      "Drosophila transgenic lines", 
      "compensation complex", 
      "clamp protein", 
      "protein clamp", 
      "Drosophila lines", 
      "transgenic lines", 
      "male Drosophila", 
      "specific recruitment", 
      "entry site", 
      "Drosophila", 
      "autosomes", 
      "chromosomes", 
      "distant interactions", 
      "protein", 
      "sites", 
      "interaction", 
      "recruitment", 
      "distance interaction", 
      "lines", 
      "complexes", 
      "mechanism", 
      "role", 
      "clamp", 
      "ability", 
      "unresolved problems", 
      "factors", 
      "maintaining", 
      "negative results", 
      "results", 
      "recruiting", 
      "work", 
      "problem", 
      "DNA-binding protein CLAMP", 
      "primary chromosome entry sites", 
      "CESs", 
      "chromosome recruiting", 
      "model transgenic Drosophila lines", 
      "Role of CLAMP"
    ], 
    "name": "The Role of CLAMP Binding Sites in Maintaining of Distant Interactions in Drosophila Transgenic Lines", 
    "pagination": "1229-1232", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1141796808"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1134/s1022795421100124"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1134/s1022795421100124", 
      "https://app.dimensions.ai/details/publication/pub.1141796808"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2022-01-01T18:57", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20220101/entities/gbq_results/article/article_876.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1134/s1022795421100124"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1134/s1022795421100124'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1134/s1022795421100124'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1134/s1022795421100124'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1134/s1022795421100124'


 

This table displays all metadata directly associated to this object as RDF triples.

119 TRIPLES      21 PREDICATES      65 URIs      57 LITERALS      6 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1134/s1022795421100124 schema:about anzsrc-for:06
2 anzsrc-for:0601
3 schema:author N4eb772787a9747539aed0fa3741840dd
4 schema:datePublished 2021-10-12
5 schema:datePublishedReg 2021-10-12
6 schema:description The mechanism of specific recruitment of the dosage compensation complex (DCC) to the X chromosome of male Drosophila remains an unresolved problem. Recently, a DNA-binding protein CLAMP, which binds to the primary chromosome entry sites (CESs) of the DCC, has been described as a factor involved in X chromosome recruiting of DCC. It has been shown that CESs can recruit DCC to autosomes. In this work, we studied the ability of a well-described CES to support distant interactions in model transgenic Drosophila lines. Negative results were obtained showing that the CES that is bound by CLAMP protein does not support distance interactions.
7 schema:genre article
8 schema:inLanguage en
9 schema:isAccessibleForFree false
10 schema:isPartOf N142bf88fe3064528811f1037bbad2439
11 Nc3e67bad21a04650bacf8535f2b10222
12 sg:journal.1319770
13 schema:keywords CESs
14 DNA-binding protein CLAMP
15 Drosophila
16 Drosophila lines
17 Drosophila transgenic lines
18 Role of CLAMP
19 ability
20 autosomes
21 chromosome recruiting
22 chromosomes
23 clamp
24 clamp protein
25 compensation complex
26 complexes
27 distance interaction
28 distant interactions
29 dosage compensation complex
30 entry site
31 factors
32 interaction
33 lines
34 maintaining
35 male Drosophila
36 mechanism
37 model transgenic Drosophila lines
38 negative results
39 primary chromosome entry sites
40 problem
41 protein
42 protein clamp
43 recruiting
44 recruitment
45 results
46 role
47 sites
48 specific recruitment
49 transgenic Drosophila lines
50 transgenic lines
51 unresolved problems
52 work
53 schema:name The Role of CLAMP Binding Sites in Maintaining of Distant Interactions in Drosophila Transgenic Lines
54 schema:pagination 1229-1232
55 schema:productId N5a44ae3b3dc941b6b92d3c55d9cde732
56 N9aa58eab43304c99886db8136e309978
57 schema:sameAs https://app.dimensions.ai/details/publication/pub.1141796808
58 https://doi.org/10.1134/s1022795421100124
59 schema:sdDatePublished 2022-01-01T18:57
60 schema:sdLicense https://scigraph.springernature.com/explorer/license/
61 schema:sdPublisher Nb5b2571b628549cfb87bb8c40de03436
62 schema:url https://doi.org/10.1134/s1022795421100124
63 sgo:license sg:explorer/license/
64 sgo:sdDataset articles
65 rdf:type schema:ScholarlyArticle
66 N0cfddac9c6174c72b3476a679f1d4f42 rdf:first sg:person.0710325110.19
67 rdf:rest Nb5d5a07338cb4250917a7d36f5e453f8
68 N142bf88fe3064528811f1037bbad2439 schema:volumeNumber 57
69 rdf:type schema:PublicationVolume
70 N4eb772787a9747539aed0fa3741840dd rdf:first sg:person.013202451310.93
71 rdf:rest Nc937707af2ef41a182c03e0d7dd688d6
72 N5a44ae3b3dc941b6b92d3c55d9cde732 schema:name doi
73 schema:value 10.1134/s1022795421100124
74 rdf:type schema:PropertyValue
75 N9aa58eab43304c99886db8136e309978 schema:name dimensions_id
76 schema:value pub.1141796808
77 rdf:type schema:PropertyValue
78 Nb5b2571b628549cfb87bb8c40de03436 schema:name Springer Nature - SN SciGraph project
79 rdf:type schema:Organization
80 Nb5d5a07338cb4250917a7d36f5e453f8 rdf:first sg:person.01221260553.28
81 rdf:rest rdf:nil
82 Nc3e67bad21a04650bacf8535f2b10222 schema:issueNumber 10
83 rdf:type schema:PublicationIssue
84 Nc937707af2ef41a182c03e0d7dd688d6 rdf:first sg:person.015613670534.82
85 rdf:rest N0cfddac9c6174c72b3476a679f1d4f42
86 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
87 schema:name Biological Sciences
88 rdf:type schema:DefinedTerm
89 anzsrc-for:0601 schema:inDefinedTermSet anzsrc-for:
90 schema:name Biochemistry and Cell Biology
91 rdf:type schema:DefinedTerm
92 sg:journal.1319770 schema:issn 1022-7954
93 1608-3369
94 schema:name Russian Journal of Genetics
95 schema:publisher Pleiades Publishing
96 rdf:type schema:Periodical
97 sg:person.01221260553.28 schema:affiliation grid-institutes:grid.419021.f
98 schema:familyName Maksimenko
99 schema:givenName O. G.
100 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01221260553.28
101 rdf:type schema:Person
102 sg:person.013202451310.93 schema:affiliation grid-institutes:grid.419021.f
103 schema:familyName Tikhonova
104 schema:givenName E. A.
105 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013202451310.93
106 rdf:type schema:Person
107 sg:person.015613670534.82 schema:affiliation grid-institutes:grid.419021.f
108 schema:familyName Mogila
109 schema:givenName V. A.
110 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015613670534.82
111 rdf:type schema:Person
112 sg:person.0710325110.19 schema:affiliation grid-institutes:grid.419021.f
113 schema:familyName Georgiev
114 schema:givenName P. G.
115 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0710325110.19
116 rdf:type schema:Person
117 grid-institutes:grid.419021.f schema:alternateName Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia
118 schema:name Institute of Gene Biology, Russian Academy of Sciences, 119334, Moscow, Russia
119 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...