Ontology type: schema:ScholarlyArticle
2010-03
AUTHORSM. Saqib, S. Nouri, B. Cayford, R. A. C. Jones, M. G. K. Jones
ABSTRACTIn the Ord River irrigation area near Kununurra in the Kimberley region of Western Australia, symptoms suggestive of Bean common mosaic virus (BCMV) were found in a common leguminous weed, Macroptilium atropurpureum (siratro). Virus from one M. atropurpureum plant and an isolate from Phaseolus vulgaris (common bean) identified previously as BCMV based on genome fragment sequencing and host range, were both transmitted to Nicotiana benthamiana, Chenopodium amaranticolor and C. quinoa by sap inoculation, giving symptoms typical of BCMV.Reciprocal inoculations with infective N. benthamiana sap indicated that both source plants contained the same virus species and reproduced field symptoms consistent with BCMV in both original hosts. Complete (10 054 nucleotide) and partial (∼8400 nucleotide) sequences were determined for two sub-isolates MS1 and NWA-1, respectively, using reverse transcription—polymerase chain reaction assays. Both sub-isolates were from a N. benthamiana plant containing a BCMV isolate originally from a single M. atropurpureum plant. Their nucleotide sequences were aligned with those of four complete and three partial BCMVgenome sequences, and their coat protein amino acid sequences were aligned with those of 17 other BCMV isolates. The results from the genomic and coat protein analyses show that the two M. atropurpureum sub-isolates were closely related to BCMV isolates reported previously from North and South America. More... »
PAGES184-191
http://scigraph.springernature.com/pub.10.1071/ap09080
DOIhttp://dx.doi.org/10.1071/ap09080
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1005105565
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/1108",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Medical Microbiology",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/11",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Medical and Health Sciences",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"alternateName": "Murdoch University",
"id": "https://www.grid.ac/institutes/grid.1025.6",
"name": [
"Plant Biotechnology Research Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Saqib",
"givenName": "M.",
"id": "sg:person.01357037230.14",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01357037230.14"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Murdoch University",
"id": "https://www.grid.ac/institutes/grid.1025.6",
"name": [
"Plant Biotechnology Research Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Nouri",
"givenName": "S.",
"id": "sg:person.0671240323.05",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0671240323.05"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Murdoch University",
"id": "https://www.grid.ac/institutes/grid.1025.6",
"name": [
"Plant Biotechnology Research Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Cayford",
"givenName": "B.",
"id": "sg:person.013236426567.41",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013236426567.41"
],
"type": "Person"
},
{
"affiliation": {
"name": [
"Agricultural Research Western Australia, Department of Agriculture and Food, 3 Baron-Hay Court, 6151, South Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Jones",
"givenName": "R. A. C.",
"id": "sg:person.010367227414.23",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010367227414.23"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Murdoch University",
"id": "https://www.grid.ac/institutes/grid.1025.6",
"name": [
"Plant Biotechnology Research Group, Western Australian State Agricultural Biotechnology Centre, School of Biological Sciences and Biotechnology, Murdoch University, 6150, Perth, WA, Australia"
],
"type": "Organization"
},
"familyName": "Jones",
"givenName": "M. G. K.",
"id": "sg:person.016427007024.24",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016427007024.24"
],
"type": "Person"
}
],
"citation": [
{
"id": "sg:pub.10.1007/s00705-008-0134-6",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1000140388",
"https://doi.org/10.1007/s00705-008-0134-6"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00705-008-0134-6",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1000140388",
"https://doi.org/10.1007/s00705-008-0134-6"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/molbev/msm092",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1001758106"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00705-002-0805-7",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1003342482",
"https://doi.org/10.1007/s00705-002-0805-7"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/0378-1119(96)00010-8",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1014601205"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1159/000150241",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1015161916"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s007050050216",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1016903689",
"https://doi.org/10.1007/s007050050216"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.soilbio.2004.04.013",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1017536967"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1071/ap02047",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1020806731",
"https://doi.org/10.1071/ap02047"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00705-007-1008-z",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025364664",
"https://doi.org/10.1007/s00705-007-1008-z"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00705-007-1008-z",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025364664",
"https://doi.org/10.1007/s00705-007-1008-z"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1071/ea9620117",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1026035249"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00705-007-1057-3",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1031592810",
"https://doi.org/10.1007/s00705-007-1057-3"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00705-007-1057-3",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1031592810",
"https://doi.org/10.1007/s00705-007-1057-3"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00705-007-1067-1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1033552262",
"https://doi.org/10.1007/s00705-007-1067-1"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00705-007-1067-1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1033552262",
"https://doi.org/10.1007/s00705-007-1067-1"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s007050170144",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1034271130",
"https://doi.org/10.1007/s007050170144"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-3059.2005.01232.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038749690"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-3059.2005.01232.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038749690"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1096-0031.2006.00140.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1040663599"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1439-0434.2007.01342.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047235694"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf01309440",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047897760",
"https://doi.org/10.1007/bf01309440"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf01309440",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047897760",
"https://doi.org/10.1007/bf01309440"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/0042-6822(76)90396-2",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1048228082"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1071/ap01051",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1052563132",
"https://doi.org/10.1071/ap01051"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1094/mpmi-9-0758",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1060079697"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1094/phyto-95-1037",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1060100131"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1094/phyto-85-542",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1060109994"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1099/0022-1317-34-3-475",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1060352456"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1099/0022-1317-70-4-935",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1060357120"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1099/0022-1317-74-10-2243",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1060358603"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1126/science.174.4008.468",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1062503737"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.2135/cropsci2005.0198",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1069029349"
],
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1082626541",
"type": "CreativeWork"
}
],
"datePublished": "2010-03",
"datePublishedReg": "2010-03-01",
"description": "In the Ord River irrigation area near Kununurra in the Kimberley region of Western Australia, symptoms suggestive of Bean common mosaic virus (BCMV) were found in a common leguminous weed, Macroptilium atropurpureum (siratro). Virus from one M. atropurpureum plant and an isolate from Phaseolus vulgaris (common bean) identified previously as BCMV based on genome fragment sequencing and host range, were both transmitted to Nicotiana benthamiana, Chenopodium amaranticolor and C. quinoa by sap inoculation, giving symptoms typical of BCMV.Reciprocal inoculations with infective N. benthamiana sap indicated that both source plants contained the same virus species and reproduced field symptoms consistent with BCMV in both original hosts. Complete (10 054 nucleotide) and partial (\u223c8400 nucleotide) sequences were determined for two sub-isolates MS1 and NWA-1, respectively, using reverse transcription\u2014polymerase chain reaction assays. Both sub-isolates were from a N. benthamiana plant containing a BCMV isolate originally from a single M. atropurpureum plant. Their nucleotide sequences were aligned with those of four complete and three partial BCMVgenome sequences, and their coat protein amino acid sequences were aligned with those of 17 other BCMV isolates. The results from the genomic and coat protein analyses show that the two M. atropurpureum sub-isolates were closely related to BCMV isolates reported previously from North and South America.",
"genre": "research_article",
"id": "sg:pub.10.1071/ap09080",
"inLanguage": [
"en"
],
"isAccessibleForFree": false,
"isPartOf": [
{
"id": "sg:journal.1023105",
"issn": [
"0815-3191",
"1448-6032"
],
"name": "Australasian Plant Pathology",
"type": "Periodical"
},
{
"issueNumber": "2",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "39"
}
],
"name": "Genome sequences and phylogenetic placement of two isolates of Bean common mosaic virus from Macroptilium atropurpureum in north-west Australia",
"pagination": "184-191",
"productId": [
{
"name": "readcube_id",
"type": "PropertyValue",
"value": [
"18535e6be77d63f984b89155e916ea5f232e53388d8d857adf24e6adcadebc83"
]
},
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1071/ap09080"
]
},
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1005105565"
]
}
],
"sameAs": [
"https://doi.org/10.1071/ap09080",
"https://app.dimensions.ai/details/publication/pub.1005105565"
],
"sdDataset": "articles",
"sdDatePublished": "2019-04-11T10:03",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000347_0000000347/records_89824_00000000.jsonl",
"type": "ScholarlyArticle",
"url": "http://link.springer.com/10.1071/AP09080"
}
]Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1071/ap09080'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1071/ap09080'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1071/ap09080'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1071/ap09080'
This table displays all metadata directly associated to this object as RDF triples.
184 TRIPLES
21 PREDICATES
55 URIs
19 LITERALS
7 BLANK NODES