Whole-genome Sequencing for Tracing the Transmission Link between Two ARD Outbreaks Caused by a Novel HAdV Serotype 7 Variant, China View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2015-11

AUTHORS

Shaofu Qiu, Peng Li, Hongbo Liu, Yong Wang, Nan Liu, Chengyi Li, Shenlong Li, Ming Li, Zhengjie Jiang, Huandong Sun, Ying Li, Jing Xie, Chaojie Yang, Jian Wang, Hao Li, Shengjie Yi, Zhihao Wu, Leili Jia, Ligui Wang, Rongzhang Hao, Yansong Sun, Liuyu Huang, Hui Ma, Zhengquan Yuan, Hongbin Song

ABSTRACT

From December 2012 to February 2013, two outbreaks of acute respiratory disease caused by HAdV-7 were reported in China. We investigated possible transmission links between these two seemingly unrelated outbreaks by integration of epidemiological and whole-genome sequencing (WGS) data. WGS analyses showed that the HAdV-7 isolates from the two outbreaks were genetically indistinguishable; however, a 12 bp deletion in the virus-associated RNA gene distinguished the outbreak isolates from other HAdV-7 isolates. Outbreak HAdV-7 isolates demonstrated increased viral replication compared to non-outbreak associated HAdV-7 isolate. Epidemiological data supported that the first outbreak was caused by introduction of the novel HAdV-7 virus by an infected recruit upon arrival at the training base. Nosocomial transmission by close contacts was the most likely source leading to onset of the second HAdV-7 outbreak, establishing the apparent transmission link between the outbreaks. Our findings imply that in-hospital contact investigations should be encouraged to reduce or interrupt further spread of infectious agents when treating outbreak cases, and WGS can provide useful information guiding infection-control interventions. More... »

PAGES

13617

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/srep13617

DOI

http://dx.doi.org/10.1038/srep13617

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1032410399

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/26338697


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