The Pacific Northwest National Laboratory library of bacterial and archaeal proteomic biodiversity View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2015-08-18

AUTHORS

Samuel H. Payne, Matthew E. Monroe, Christopher C. Overall, Gary R. Kiebel, Michael Degan, Bryson C. Gibbons, Grant M. Fujimoto, Samuel O. Purvine, Joshua N. Adkins, Mary S. Lipton, Richard D. Smith

ABSTRACT

This Data Descriptor announces the submission to public repositories of the PNNL Biodiversity Library, a large collection of global proteomics data for 112 bacterial and archaeal organisms. The data comprises 35,162 tandem mass spectrometry (MS/MS) datasets from ~10 years of research. All data has been searched, annotated and organized in a consistent manner to promote reuse by the community. Protein identifications were cross-referenced with KEGG functional annotations which allows for pathway oriented investigation. We present the data as a freely available community resource. A variety of data re-use options are described for computational modelling, proteomics assay design and bioengineering. Instrument data and analysis files are available at ProteomeXchange via the MassIVE partner repository under the identifiers PXD001860 and MSV000079053. More... »

PAGES

150041

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/sdata.2015.41

DOI

http://dx.doi.org/10.1038/sdata.2015.41

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1020995919

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/26306205


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