An open science resource for establishing reliability and reproducibility in functional connectomics View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2014-12-09

AUTHORS

Xi-Nian Zuo, Jeffrey S Anderson, Pierre Bellec, Rasmus M Birn, Bharat B Biswal, Janusch Blautzik, John C.S Breitner, Randy L Buckner, Vince D Calhoun, F. Xavier Castellanos, Antao Chen, Bing Chen, Jiangtao Chen, Xu Chen, Stanley J Colcombe, William Courtney, R Cameron Craddock, Adriana Di Martino, Hao-Ming Dong, Xiaolan Fu, Qiyong Gong, Krzysztof J Gorgolewski, Ying Han, Ye He, Yong He, Erica Ho, Avram Holmes, Xiao-Hui Hou, Jeremy Huckins, Tianzi Jiang, Yi Jiang, William Kelley, Clare Kelly, Margaret King, Stephen M LaConte, Janet E Lainhart, Xu Lei, Hui-Jie Li, Kaiming Li, Kuncheng Li, Qixiang Lin, Dongqiang Liu, Jia Liu, Xun Liu, Yijun Liu, Guangming Lu, Jie Lu, Beatriz Luna, Jing Luo, Daniel Lurie, Ying Mao, Daniel S Margulies, Andrew R Mayer, Thomas Meindl, Mary E Meyerand, Weizhi Nan, Jared A Nielsen, David O’Connor, David Paulsen, Vivek Prabhakaran, Zhigang Qi, Jiang Qiu, Chunhong Shao, Zarrar Shehzad, Weijun Tang, Arno Villringer, Huiling Wang, Kai Wang, Dongtao Wei, Gao-Xia Wei, Xu-Chu Weng, Xuehai Wu, Ting Xu, Ning Yang, Zhi Yang, Yu-Feng Zang, Lei Zhang, Qinglin Zhang, Zhe Zhang, Zhiqiang Zhang, Ke Zhao, Zonglei Zhen, Yuan Zhou, Xing-Ting Zhu, Michael P Milham

ABSTRACT

Efforts to identify meaningful functional imaging-based biomarkers are limited by the ability to reliably characterize inter-individual differences in human brain function. Although a growing number of connectomics-based measures are reported to have moderate to high test-retest reliability, the variability in data acquisition, experimental designs, and analytic methods precludes the ability to generalize results. The Consortium for Reliability and Reproducibility (CoRR) is working to address this challenge and establish test-retest reliability as a minimum standard for methods development in functional connectomics. Specifically, CoRR has aggregated 1,629 typical individuals’ resting state fMRI (rfMRI) data (5,093 rfMRI scans) from 18 international sites, and is openly sharing them via the International Data-sharing Neuroimaging Initiative (INDI). To allow researchers to generate various estimates of reliability and reproducibility, a variety of data acquisition procedures and experimental designs are included. Similarly, to enable users to assess the impact of commonly encountered artifacts (for example, motion) on characterizations of inter-individual variation, datasets of varying quality are included. More... »

PAGES

140049

Journal

TITLE

Scientific Data

ISSUE

1

VOLUME

1

Author Affiliations

  • Faculty of Psychology, Southwest University, 400715, Beibei, Chongqing, China
  • Division of Neuroradiology, University of Utah, 84132, Salt Lake City, Utah, USA
  • Unité de neuroimagerie fonctionnelle, Centre de recherche de l’institut universitaire de gériatrie de Montréal, Université de Montréal, H3W 1W5, Montreal, Quebec, Canada
  • Department of Psychiatry, University of Wisconsin—Madison, 53719, Madison, Wisconsin, USA
  • Department of Biomedical Engineering, New Jersey Institute of Technology, 07102, Newark, New Jersey, USA
  • Institute of Clinical Radiology, Ludwig-Maximilians-University, 80336, Munich, Germany
  • Department of Psychiatry, Centre for Studies on Prevention of Alzheimer’s Disease, Douglas Institute, McGill University Faculty of Medicine, H4H 1R3, Montreal, Quebec, Canada
  • Department of Psychology, Harvard University, 02138, Cambridge, Massachussetts, USA
  • Mind Research Network, 87106, Albuquerque, New Mexico, USA
  • Phyllis Green and Randolph Cōwen Institute for Pediatric Neuroscience, the Child Study Center at NYU Langone Medical Center, 10016, New York, New York, USA
  • Center for Cognition and Brain Disorders, Hangzhou Normal University, Gongshu, 311121, Hangzhou, Zhejiang, China
  • Nathan S. Kline Institute for Psychiatric Research, 10962, Orangeburg, New York, USA
  • Center for the Developing Brain, Child Mind Institute, 10022, New York, New York, USA
  • University of Chinese Academy of Sciences, 100049, Shijingshan, Beijing, China
  • State Key Laboratory of Brain and Cognitive Science, Institute of Psychology, Chinese Academy of Sciences, 100101, Chaoyang, Beijing, China
  • Department of Radiology, Huaxi MR Research Center (HMRRC), West China Hospital of Sichuan University, Wuhou, 610041, Chengdu, Sichuan, China
  • Max Planck Research Group for Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, 04103, Leipzig, Germany
  • Department of Neurology, Xuanwu Hospital, Capital Medical University, 100053, Xicheng, Beijing, China
  • State Key Laboratory of Cognitive Neuroscience and Learning and IDG/McGovern Institute for Brain Research, Beijing Normal University, 100875, Haidian, Beijing, China
  • Department of Psychology, Yale University, 06511, New Haven, Connecticut, USA
  • Department of Psychological and Brain Sciences, Center for Cognitive Neuroscience, Dartmouth College, 03755, Hanover, New Hampshire, USA
  • Brainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, 100190, Haidian, Beijing, China
  • Key Laboratory of Behavioral Science and Magnetic Resonance Imaging Research Center, Institute of Psychology, Chinese Academy of Sciences, 100101, Chaoyang, Beijing, China
  • Virginia Tech Carilion Research Institute, 24016, Roanoke, Virginia, USA
  • Department of Radiology, Xuanwu Hospital, Capital Medical University, 100053, Xicheng, Beijing, China
  • Department of Medical Imaging, Jinling Hospital, School of Medicine, Nanjing University, Xuanwu, 210002, Nanjing, Jiangsu, China
  • Department of Psychiatry, School of Medicine, University of Pittsburgh, 15213, Pittsburgh, Pennsylvania, USA
  • Department of Psychology, Beijing Key Laboratory of Learning and Cognition, Capital Normal University, 100048, Haidian, Beijing, China
  • Department of Neurosurgery, Huashan Hospital, Fudan University, 200040, Jingan, Shanghai, China
  • Department of Biomedical Engineering, University of Wisconsin—Madison, 53705, Madison, Wisconsin, USA
  • Department of Radiology, University of Wisconsin—Madison, 53705, Madison, Wisconsin, USA
  • Department of Psychiatry, Huashan Hospital, Fudan University, 200021, Jingan, Shanghai, China
  • Department of Radiology, Huashan Hospital, Fudan University, 200040, Jingan, Shanghai, China
  • Department of Neurology, Max Planck Institute for Human Cognitive and Brain Sciences, 04103, Leipzig, Germany
  • Department of Psychiatry, Renmin Hospital of Wuhan University, 430060, Wuhan, Hubei, China
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/sdata.2014.49

    DOI

    http://dx.doi.org/10.1038/sdata.2014.49

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1035405088

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/25977800


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