Ontology type: schema:ScholarlyArticle Open Access: True
2019-12
AUTHORSXiaolin Li, Lijuan Yan, Qiang Li, Hao Tan, Jie Zhou, Renyun Miao, Lei Ye, Weihong Peng, Xiaoping Zhang, Wei Tan, Bo Zhang
ABSTRACTAuricularia cornea is a widely cultivated edible fungus with substantial nutritive value. This study aimed to enrich the multifunctional bionutrient element selenium in A. cornea to improve its quality and explore the accumulation of selenium in the fungus using high-throughput RNA-Seq technology. In general, the treatment group with a 100 µg/g supply of selenium outperformed the other treatment groups in terms of high yield, rich crude polysaccharides and a high total selenium concentration. Additional evidences demonstrated the budding and mature phases were two typical growth stages of A. cornea and were important for the accumulation of selenium. Therefore, the budding and mature phase tissues of A. cornea in the treatment group with a 100 µg/g supply of selenium were used for transcriptome analysis and compared to those of a control group that lacked additional selenium. A total of 2.56 × 105 unigenes from A. cornea transcriptome were assembled and annotated to five frequently used databases including NR, GO, KEGG, eggNOG and SwissProt. GO and KEGG pathway analysis revealed that genes involved in metabolic process and translation were up-expressed at the budding stage in response to selenium supplementation, including amino acid metabolism, lipid metabolism, ribosome. In addition, the differential gene expression patterns of A. cornea suggested that the up-expressed genes were more likely to be detected at the budding stage than at the mature stage. These results provide insights into the transcriptional response of A. cornea to selenium accumulation. More... »
PAGES5641
http://scigraph.springernature.com/pub.10.1038/s41598-019-42157-2
DOIhttp://dx.doi.org/10.1038/s41598-019-42157-2
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1113185024
PUBMEDhttps://www.ncbi.nlm.nih.gov/pubmed/30948778
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Genetics",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Biological Sciences",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"alternateName": "Sichuan Academy of Agricultural Sciences",
"id": "https://www.grid.ac/institutes/grid.465230.6",
"name": [
"Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China. kerrylee_tw@sina.com."
],
"type": "Organization"
},
"familyName": "Li",
"givenName": "Xiaolin",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Friedrich Schiller University Jena",
"id": "https://www.grid.ac/institutes/grid.9613.d",
"name": [
"Chair for Aquatic Geomicrobiology, Institute of Biodiversity, Friedrich Schiller University Jena, Jena, D-07743, Germany."
],
"type": "Organization"
},
"familyName": "Yan",
"givenName": "Lijuan",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan University",
"id": "https://www.grid.ac/institutes/grid.13291.38",
"name": [
"Research Center of Edible Fungi, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.",
"College of Life Science, Sichuan University, Chengdu, 610065, China."
],
"type": "Organization"
},
"familyName": "Li",
"givenName": "Qiang",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan Academy of Agricultural Sciences",
"id": "https://www.grid.ac/institutes/grid.465230.6",
"name": [
"Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China."
],
"type": "Organization"
},
"familyName": "Tan",
"givenName": "Hao",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan Academy of Agricultural Sciences",
"id": "https://www.grid.ac/institutes/grid.465230.6",
"name": [
"Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China."
],
"type": "Organization"
},
"familyName": "Zhou",
"givenName": "Jie",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan Academy of Agricultural Sciences",
"id": "https://www.grid.ac/institutes/grid.465230.6",
"name": [
"Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China."
],
"type": "Organization"
},
"familyName": "Miao",
"givenName": "Renyun",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan Academy of Agricultural Sciences",
"id": "https://www.grid.ac/institutes/grid.465230.6",
"name": [
"Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China."
],
"type": "Organization"
},
"familyName": "Ye",
"givenName": "Lei",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan Academy of Agricultural Sciences",
"id": "https://www.grid.ac/institutes/grid.465230.6",
"name": [
"Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China."
],
"type": "Organization"
},
"familyName": "Peng",
"givenName": "Weihong",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan Agricultural University",
"id": "https://www.grid.ac/institutes/grid.80510.3c",
"name": [
"Department of Microbiology, College of Resources, Sichuan Agricultural University, Chengdu, 611130, China."
],
"type": "Organization"
},
"familyName": "Zhang",
"givenName": "Xiaoping",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan Academy of Agricultural Sciences",
"id": "https://www.grid.ac/institutes/grid.465230.6",
"name": [
"Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China. tanweichengdu@126.com."
],
"type": "Organization"
},
"familyName": "Tan",
"givenName": "Wei",
"type": "Person"
},
{
"affiliation": {
"alternateName": "Sichuan Academy of Agricultural Sciences",
"id": "https://www.grid.ac/institutes/grid.465230.6",
"name": [
"Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China. bozhang5658@foxmail.com."
],
"type": "Organization"
},
"familyName": "Zhang",
"givenName": "Bo",
"type": "Person"
}
],
"citation": [
{
"id": "https://doi.org/10.1111/j.1365-2621.2004.tb13355.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002960073"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-2621.2004.tb13355.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002960073"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.peptides.2004.01.015",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1004792502"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1017/s0007114508922522",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1004950520"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1017/s0007114508922522",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1004950520"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s004250050630",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1005119327",
"https://doi.org/10.1007/s004250050630"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nprot.2008.73",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1005355981",
"https://doi.org/10.1038/nprot.2008.73"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.fgb.2011.01.009",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1007149297"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0045-6535(97)10064-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1009066892"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.biortech.2005.10.038",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1009647974"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/aob/mcv180",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1010314092"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00216-004-2670-6",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1011619966",
"https://doi.org/10.1007/s00216-004-2670-6"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00216-004-2670-6",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1011619966",
"https://doi.org/10.1007/s00216-004-2670-6"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00253-010-2821-y",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1012901299",
"https://doi.org/10.1007/s00253-010-2821-y"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00253-010-2821-y",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1012901299",
"https://doi.org/10.1007/s00253-010-2821-y"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s1471-4914(02)02355-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1013236550"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/bib/bbs046",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1013843285"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1155/2008/619832",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1015467132"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nbt.1883",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1015803168",
"https://doi.org/10.1038/nbt.1883"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/bioinformatics/bti430",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1016584149"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/gkh063",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1017271040"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.chroma.2010.07.036",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1018835979"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.carbpol.2009.12.027",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1019505617"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.3390/molecules201019489",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1020372316"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.3390/molecules201019489",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1020372316"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.enzmictec.2008.12.003",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1021439373"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1186/1471-2105-12-323",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1021902674",
"https://doi.org/10.1186/1471-2105-12-323"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.3389/fpls.2015.00136",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1023327465"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00419469",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025205051",
"https://doi.org/10.1007/bf00419469"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00419469",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025205051",
"https://doi.org/10.1007/bf00419469"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1046/j.1472-765x.2003.01354.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1026874436"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/gkg095",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1027045924"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1046/j.1469-8137.2003.00786.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1027110778"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.phytochem.2015.02.024",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1027164903"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.phytochem.2015.02.024",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1027164903"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.lwt.2015.03.046",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1028721973"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1017/s0007114508939830",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1029723643"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1017/s0007114508939830",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1029723643"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/srep24611",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1030161511",
"https://doi.org/10.1038/srep24611"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nbt.1621",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1031035095",
"https://doi.org/10.1038/nbt.1621"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0308-8146(99)00264-2",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1032100502"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0140-6736(00)02490-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1032384467"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.ecoenv.2014.11.028",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1032540424"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s12010-012-9628-5",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1034478312",
"https://doi.org/10.1007/s12010-012-9628-5"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.procbio.2005.08.004",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1037654175"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s12199-007-0019-4",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1037850253",
"https://doi.org/10.1007/s12199-007-0019-4"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s12199-007-0019-4",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1037850253",
"https://doi.org/10.1007/s12199-007-0019-4"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0960-8524(03)00041-5",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038710703"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0960-8524(03)00041-5",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038710703"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1365-2958.2011.07776.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038883926"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nbt.1643",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038937180",
"https://doi.org/10.1038/nbt.1643"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/nbt.1643",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038937180",
"https://doi.org/10.1038/nbt.1643"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1469-8137.1993.tb03751.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1039073250"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1371/journal.pone.0056686",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1040496481"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/gkt1253",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1040558615"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1128/mmbr.64.2.316-353.2000",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1043130392"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1371/journal.pone.0044031",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1043155344"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1023/a:1006738116887",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1043895437",
"https://doi.org/10.1023/a:1006738116887"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/75556",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1044135237",
"https://doi.org/10.1038/75556"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/75556",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1044135237",
"https://doi.org/10.1038/75556"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00284-013-0442-2",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1044392751",
"https://doi.org/10.1007/s00284-013-0442-2"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0924-2244(98)00027-2",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1044551822"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.5897/ajmr2014.7250",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1045397943"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.foodchem.2004.01.015",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1045525598"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00216-001-1215-5",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1046209320",
"https://doi.org/10.1007/s00216-001-1215-5"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1371/journal.pone.0091740",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1047755967"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1371/journal.pone.0123025",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1049232263"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/30.9.e36",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1049412343"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1186/gb-2010-11-2-r14",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1050171830",
"https://doi.org/10.1186/gb-2010-11-2-r14"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1753-4887.1976.tb05819.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1051777852"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s004250050402",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1051985894",
"https://doi.org/10.1007/s004250050402"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.3177/jnsv.51.194",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1052488932"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00217-015-2474-2",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1052732070",
"https://doi.org/10.1007/s00217-015-2474-2"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1021/jf001525d",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1055898517"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1021/jf001525d",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1055898517"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1021/jf049965i",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1055903443"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1021/jf049965i",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1055903443"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1080/10590500802350086",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1058364137"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1126/science.179.4073.588",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1062506517"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1128/aem.00508-16",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1062710074"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1615/intjmedmushr.v13.i6.30",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1068138891"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/jfpp.13386",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1086031879"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/j.foodchem.2018.05.087",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1104128898"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00792-018-1046-3",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1106329104",
"https://doi.org/10.1007/s00792-018-1046-3"
],
"type": "CreativeWork"
}
],
"datePublished": "2019-12",
"datePublishedReg": "2019-12-01",
"description": "Auricularia cornea is a widely cultivated edible fungus with substantial nutritive value. This study aimed to enrich the multifunctional bionutrient element selenium in A. cornea to improve its quality and explore the accumulation of selenium in the fungus using high-throughput RNA-Seq technology. In general, the treatment group with a 100\u2009\u00b5g/g supply of selenium outperformed the other treatment groups in terms of high yield, rich crude polysaccharides and a high total selenium concentration. Additional evidences demonstrated the budding and mature phases were two typical growth stages of A. cornea and were important for the accumulation of selenium. Therefore, the budding and mature phase tissues of A. cornea in the treatment group with a 100\u2009\u00b5g/g supply of selenium were used for transcriptome analysis and compared to those of a control group that lacked additional selenium. A total of 2.56\u2009\u00d7\u2009105 unigenes from A. cornea transcriptome were assembled and annotated to five frequently used databases including NR, GO, KEGG, eggNOG and SwissProt. GO and KEGG pathway analysis revealed that genes involved in metabolic process and translation were up-expressed at the budding stage in response to selenium supplementation, including amino acid metabolism, lipid metabolism, ribosome. In addition, the differential gene expression patterns of A. cornea suggested that the up-expressed genes were more likely to be detected at the budding stage than at the mature stage. These results provide insights into the transcriptional response of A. cornea to selenium accumulation.",
"genre": "research_article",
"id": "sg:pub.10.1038/s41598-019-42157-2",
"inLanguage": [
"en"
],
"isAccessibleForFree": true,
"isPartOf": [
{
"id": "sg:journal.1045337",
"issn": [
"2045-2322"
],
"name": "Scientific Reports",
"type": "Periodical"
},
{
"issueNumber": "1",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "9"
}
],
"name": "Transcriptional profiling of Auricularia cornea in selenium accumulation.",
"pagination": "5641",
"productId": [
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1038/s41598-019-42157-2"
]
},
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1113185024"
]
},
{
"name": "nlm_unique_id",
"type": "PropertyValue",
"value": [
"101563288"
]
},
{
"name": "pubmed_id",
"type": "PropertyValue",
"value": [
"30948778"
]
}
],
"sameAs": [
"https://doi.org/10.1038/s41598-019-42157-2",
"https://app.dimensions.ai/details/publication/pub.1113185024"
],
"sdDataset": "articles",
"sdDatePublished": "2019-04-15T09:14",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000376_0000000376/records_56164_00000006.jsonl",
"type": "ScholarlyArticle",
"url": "http://www.nature.com/articles/s41598-019-42157-2"
}
]
Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/s41598-019-42157-2'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/s41598-019-42157-2'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/s41598-019-42157-2'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/s41598-019-42157-2'
This table displays all metadata directly associated to this object as RDF triples.
366 TRIPLES
21 PREDICATES
98 URIs
20 LITERALS
8 BLANK NODES