New world goat populations are a genetically diverse reservoir for future use View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2019-02-06

AUTHORS

Tiago do Prado Paim, Danielle Assis Faria, El Hamidi Hay, Concepta McManus, Maria Rosa Lanari, Laura Chaverri Esquivel, María Isabel Cascante, Esteban Jimenez Alfaro, Argerie Mendez, Olivardo Faco, Kleibe de Moraes Silva, Carlos Alberto Mezzadra, Arthur Mariante, Samuel Rezende Paiva, Harvey D. Blackburn

ABSTRACT

Western hemisphere goats have European, African and Central Asian origins, and some local or rare breeds are reported to be adapted to their environments and economically important. By-in-large these genetic resources have not been quantified. Using 50 K SNP genotypes of 244 animals from 12 goat populations in United States, Costa Rica, Brazil and Argentina, we evaluated the genetic diversity, population structure and selective sweeps documenting goat migration to the "New World". Our findings suggest the concept of breed, particularly among "locally adapted" breeds, is not a meaningful way to characterize goat populations. The USA Spanish goats were found to be an important genetic reservoir, sharing genomic composition with the wild ancestor and with specialized breeds (e.g. Angora, Lamancha and Saanen). Results suggest goats in the Americas have substantial genetic diversity to use in selection and promote environmental adaptation or product driven specialization. These findings highlight the importance of maintaining goat conservation programs and suggest an awaiting reservoir of genetic diversity for breeding and research while simultaneously discarding concerns about breed designations. More... »

PAGES

1476

References to SciGraph publications

  • 2015-06-25. Characterization of linkage disequilibrium, consistency of gametic phase and admixture in Australian and Canadian goats in BMC GENETICS
  • 2017-03-14. Genetic diversity and signatures of selection in various goat breeds revealed by genome-wide SNP markers in BMC GENOMICS
  • 2008-04-09. Heat tolerance in Brazilian sheep: Physiological and blood parameters in TROPICAL ANIMAL HEALTH AND PRODUCTION
  • 2011-09. Genetic diversity of Ovis aries populations near domestication centers and in the New World in GENETICA
  • 2013-12-17. Genome wide association studies for body conformation traits in the Chinese Holstein cattle population in BMC GENOMICS
  • 2015-11-11. Multiple genomic signatures of selection in goats and sheep indigenous to a hot arid environment in HEREDITY
  • 2009-01-21. Large-scale association study for structural soundness and leg locomotion traits in the pig in GENETICS SELECTION EVOLUTION
  • 2015-06-05. Reference genome of wild goat (capra aegagrus) and sequencing of goat breeds provide insight into genic basis of goat domestication in BMC GENOMICS
  • 2018-03-06. Convergent genomic signatures of domestication in sheep and goats in NATURE COMMUNICATIONS
  • 2018-01-23. Revealing the selection history of adaptive loci using genome-wide scans for selection: an example from domestic sheep in BMC GENOMICS
  • 2014-01-30. Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle in BMC GENETICS
  • 2015-08-04. Genetic diversity of Italian goat breeds assessed with a medium-density SNP chip in GENETICS SELECTION EVOLUTION
  • 2016-07-25. A genome-wide perspective about the diversity and demographic history of seven Spanish goat breeds in GENETICS SELECTION EVOLUTION
  • 2013-06-07. Detection of selective sweeps in cattle using genome-wide SNP data in BMC GENOMICS
  • 2014-10-01. Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation in HEREDITY
  • Journal

    TITLE

    Scientific Reports

    ISSUE

    1

    VOLUME

    9

    Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/s41598-019-38812-3

    DOI

    http://dx.doi.org/10.1038/s41598-019-38812-3

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1111950515

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/30728441


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