Bacterial communities associated to Chilean altiplanic native plants from the Andean grasslands soils View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2019-12

AUTHORS

Beatriz Fernández-Gómez, Jonathan Maldonado, Dinka Mandakovic, Alexis Gaete, Rodrigo A. Gutiérrez, Alejandro Maass, Veronica Cambiazo, Mauricio González

ABSTRACT

The rhizosphere is considered the primary place for soil microbiome differentiation and plays a key role in plant survival, especially for those subjected to environmental stress. Using high-throughput sequencing of the 16S rRNA gene, we analyzed and compared soil bacterial communities associated to four of the most abundant high altitude native plant species of the Chilean Andean grasslands. We examined three soil compartments: the rhizosphere (bacteria firmly attached to the roots), the rhizosphere-surrounding soil (bacteria loosely attached to the roots) and the bulk soil (plant-free soil). The rhizosphere microbiome was in all cases the least diverse, exposing that the bulk soil was a more complex environment. Taxonomic analysis revealed an abrupt change between the rhizosphere and the rest of the non-rhizospheric soils. Thus, while rhizobacterial communities were enriched in Proteobacteria (mainly Alphaproteobacteria), Actinobacteria (mostly Blastocatellia) dominated in bulk soils. Finally, we detected certain taxonomic rhizosphere signatures, which could be attributed to a particular genotype. Overall, our results indicate that the thin layer of soil surrounding the roots constitute a distinctive soil environment. This study contributes to expand the knowledge about soil bacterial communities in the Chilean highlands and takes the first step to understand the processes that might lead to the rhizosphere differentiation in that area. More... »

PAGES

1042

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  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/s41598-018-37776-0

    DOI

    http://dx.doi.org/10.1038/s41598-018-37776-0

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1111769970

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/30705356


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