Metagenomics detection and characterisation of viruses in faecal samples from Australian wild birds View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2018-12

AUTHORS

Jessy Vibin, Anthony Chamings, Fiona Collier, Marcel Klaassen, Tiffanie M. Nelson, Soren Alexandersen

ABSTRACT

We present an optimised metagenomics method for detection and characterisation of all virus types including single and double stranded DNA/RNA and enveloped and non-enveloped viruses. Initial evaluation included both spiked and non-spiked bird faecal samples as well as non-spiked human faecal samples. From the non-spiked bird samples (Australian Muscovy duck and Pacific black ducks) we detected 21 viruses, and we also present a summary of a few viruses detected in human faecal samples. We then present a detailed analysis of selected virus sequences in the avian samples that were somewhat similar to known viruses, and had good quality (Q20 or higher) and quantity of next-generation sequencing reads, and was of interest from a virological point of view, for example, avian coronavirus and avian paramyxovirus 6. Some of these viruses were closely related to known viruses while others were more distantly related with 70% or less identity to currently known/sequenced viruses. Besides detecting viruses, the technique also allowed the characterisation of host mitochondrial DNA present and thus identifying host species, while ribosomal RNA sequences provided insight into the "ribosomal activity microbiome"; of gut parasites; and of food eaten such as plants or insects, which we correlated to non-avian host associated viruses. More... »

PAGES

8686

References to SciGraph publications

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/s41598-018-26851-1

DOI

http://dx.doi.org/10.1038/s41598-018-26851-1

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1104336756

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/29875375


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Deakin University", 
          "id": "https://www.grid.ac/institutes/grid.1021.2", 
          "name": [
            "Geelong Centre for Emerging Infectious Diseases, Victoria, 3220, Geelong, Australia", 
            "Deakin University, Victoria, 3220, Geelong, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Vibin", 
        "givenName": "Jessy", 
        "id": "sg:person.010571004502.26", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010571004502.26"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Deakin University", 
          "id": "https://www.grid.ac/institutes/grid.1021.2", 
          "name": [
            "Geelong Centre for Emerging Infectious Diseases, Victoria, 3220, Geelong, Australia", 
            "Deakin University, Victoria, 3220, Geelong, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Chamings", 
        "givenName": "Anthony", 
        "id": "sg:person.01214703333.09", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01214703333.09"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Geelong Hospital", 
          "id": "https://www.grid.ac/institutes/grid.415335.5", 
          "name": [
            "Geelong Centre for Emerging Infectious Diseases, Victoria, 3220, Geelong, Australia", 
            "Deakin University, Victoria, 3220, Geelong, Australia", 
            "Barwon Health, University Hospital Geelong, 3220, Geelong, Victoria, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Collier", 
        "givenName": "Fiona", 
        "id": "sg:person.01333270541.80", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01333270541.80"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Deakin University", 
          "id": "https://www.grid.ac/institutes/grid.1021.2", 
          "name": [
            "Deakin University, Victoria, 3220, Geelong, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Klaassen", 
        "givenName": "Marcel", 
        "id": "sg:person.01050036006.44", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01050036006.44"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Deakin University", 
          "id": "https://www.grid.ac/institutes/grid.1021.2", 
          "name": [
            "Geelong Centre for Emerging Infectious Diseases, Victoria, 3220, Geelong, Australia", 
            "Deakin University, Victoria, 3220, Geelong, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Nelson", 
        "givenName": "Tiffanie M.", 
        "id": "sg:person.0742103064.12", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0742103064.12"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Geelong Hospital", 
          "id": "https://www.grid.ac/institutes/grid.415335.5", 
          "name": [
            "Geelong Centre for Emerging Infectious Diseases, Victoria, 3220, Geelong, Australia", 
            "Deakin University, Victoria, 3220, Geelong, Australia", 
            "Barwon Health, University Hospital Geelong, 3220, Geelong, Victoria, Australia"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Alexandersen", 
        "givenName": "Soren", 
        "id": "sg:person.0600436641.84", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0600436641.84"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1093/molbev/mst197", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001444669"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.71.8.4679-4689.2005", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002253325"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-016-3029-y", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002682848", 
          "https://doi.org/10.1007/s00705-016-3029-y"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-016-3029-y", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002682848", 
          "https://doi.org/10.1007/s00705-016-3029-y"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1743-422x-7-313", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003970805", 
          "https://doi.org/10.1186/1743-422x-7-313"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkw822", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007436514"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nprot.2009.10", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007448515", 
          "https://doi.org/10.1038/nprot.2009.10"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nprot.2009.10", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007448515", 
          "https://doi.org/10.1038/nprot.2009.10"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btm404", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007683223"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3109/19401736.2013.784756", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008714766"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/srep16532", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1009597972", 
          "https://doi.org/10.1038/srep16532"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0151921", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010353107"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0151921", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010353107"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3201/eid2101.140766", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011293834"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/molbev/msw054", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012564990"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0022-2836(05)80360-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013618994"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3201/eid1703.101410", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014110285"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.meegid.2012.11.015", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016152259"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.meegid.2016.05.018", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1016994901"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0378-1135(96)00050-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1018500308"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0005-2736(03)00164-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021041901"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0005-2736(03)00164-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021041901"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01731581", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023239976", 
          "https://doi.org/10.1007/bf01731581"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01731581", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023239976", 
          "https://doi.org/10.1007/bf01731581"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01731581", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023239976", 
          "https://doi.org/10.1007/bf01731581"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature20167", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024156938", 
          "https://doi.org/10.1038/nature20167"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature20167", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024156938", 
          "https://doi.org/10.1038/nature20167"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4615-5341-0_2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026001573", 
          "https://doi.org/10.1007/978-1-4615-5341-0_2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4615-5341-0_2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026001573", 
          "https://doi.org/10.1007/978-1-4615-5341-0_2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jvi.06540-11", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026613775"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.7589/0090-3558-40.4.639", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028515333"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jvi.05838-11", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028548587"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2164-14-320", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030632316", 
          "https://doi.org/10.1186/1471-2164-14-320"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3390/v8030077", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031986685"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0139810", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1033055417"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0072787", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035580649"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-011-0964-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036124699", 
          "https://doi.org/10.1007/s00705-011-0964-5"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00705-014-2162-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1037307032", 
          "https://doi.org/10.1007/s00705-014-2162-8"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3109/19401736.2014.945540", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038015771"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/aem.01525-14", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041351559"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0129256", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041801583"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.virol.2016.03.004", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042569536"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.coviro.2014.09.017", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043034939"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jvi.03464-12", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044643420"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nm.3950", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044921131", 
          "https://doi.org/10.1038/nm.3950"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1080/01652176.2015.1046014", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046890792"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/genomea.00868-14", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046955884"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3201/eid1409.080570", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1048942297"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.virol.2010.04.004", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049176005"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.7589/0090-3558-46.2.649", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049768299"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/tbed.12269", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050519337"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.virusres.2010.02.015", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053680330"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/0022-1317-49-2-255", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060353619"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/0022-1317-53-1-67", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060354350"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/00221287-19-3-592", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060371612"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1099/vir.0.066498-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060399577"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/pdb.top17", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060415540"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.76.1958.34-a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062647608"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1556/avet.58.2010.1.5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1067882241"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1556/avet.58.2010.1.5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1067882241"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.20506/rst.19.2.1231", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1068791751"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.20506/rst.19.2.1231", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1068791751"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/oxfordjournals.molbev.a040752", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1077145115"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1079518189", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1080292415", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1081725602", 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/srep44423", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1084132313", 
          "https://doi.org/10.1038/srep44423"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/ece3.2991", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1085074362"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/emi.2017.20", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1085575324", 
          "https://doi.org/10.1038/emi.2017.20"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41598-017-04145-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1086075176", 
          "https://doi.org/10.1038/s41598-017-04145-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jvi.00680-17", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1086132817"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jvi.00680-17", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1086132817"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1706359114", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1090619171"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41598-017-07290-w", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1090931403", 
          "https://doi.org/10.1038/s41598-017-07290-w"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41598-017-07290-w", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1090931403", 
          "https://doi.org/10.1038/s41598-017-07290-w"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41467-017-01086-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1092102050", 
          "https://doi.org/10.1038/s41467-017-01086-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41598-018-24407-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1103249578", 
          "https://doi.org/10.1038/s41598-018-24407-x"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2018-12", 
    "datePublishedReg": "2018-12-01", 
    "description": "We present an optimised metagenomics method for detection and characterisation of all virus types including single and double stranded DNA/RNA and enveloped and non-enveloped viruses. Initial evaluation included both spiked and non-spiked bird faecal samples as well as non-spiked human faecal samples. From the non-spiked bird samples (Australian Muscovy duck and Pacific black ducks) we detected 21 viruses, and we also present a summary of a few viruses detected in human faecal samples. We then present a detailed analysis of selected virus sequences in the avian samples that were somewhat similar to known viruses, and had good quality (Q20 or higher) and quantity of next-generation sequencing reads, and was of interest from a virological point of view, for example, avian coronavirus and avian paramyxovirus 6. Some of these viruses were closely related to known viruses while others were more distantly related with 70% or less identity to currently known/sequenced viruses. Besides detecting viruses, the technique also allowed the characterisation of host mitochondrial DNA present and thus identifying host species, while ribosomal RNA sequences provided insight into the \"ribosomal activity microbiome\"; of gut parasites; and of food eaten such as plants or insects, which we correlated to non-avian host associated viruses.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1038/s41598-018-26851-1", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": true, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.6939348", 
        "type": "MonetaryGrant"
      }, 
      {
        "id": "sg:grant.6939678", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1045337", 
        "issn": [
          "2045-2322"
        ], 
        "name": "Scientific Reports", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "8"
      }
    ], 
    "name": "Metagenomics detection and characterisation of viruses in faecal samples from Australian wild birds", 
    "pagination": "8686", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "49a2c33ada8546327a98e075c3fc6516768122b933d18d7f2923620102c7dbf7"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "29875375"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "101563288"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1038/s41598-018-26851-1"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1104336756"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1038/s41598-018-26851-1", 
      "https://app.dimensions.ai/details/publication/pub.1104336756"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T13:32", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8659_00000604.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://www.nature.com/articles/s41598-018-26851-1"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/s41598-018-26851-1'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/s41598-018-26851-1'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/s41598-018-26851-1'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/s41598-018-26851-1'


 

This table displays all metadata directly associated to this object as RDF triples.

322 TRIPLES      21 PREDICATES      94 URIs      21 LITERALS      9 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1038/s41598-018-26851-1 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N4f12c8df3a7b4c5db1095c4c209f30da
4 schema:citation sg:pub.10.1007/978-1-4615-5341-0_2
5 sg:pub.10.1007/bf01731581
6 sg:pub.10.1007/s00705-011-0964-5
7 sg:pub.10.1007/s00705-014-2162-8
8 sg:pub.10.1007/s00705-016-3029-y
9 sg:pub.10.1038/emi.2017.20
10 sg:pub.10.1038/nature20167
11 sg:pub.10.1038/nm.3950
12 sg:pub.10.1038/nprot.2009.10
13 sg:pub.10.1038/s41467-017-01086-2
14 sg:pub.10.1038/s41598-017-04145-2
15 sg:pub.10.1038/s41598-017-07290-w
16 sg:pub.10.1038/s41598-018-24407-x
17 sg:pub.10.1038/srep16532
18 sg:pub.10.1038/srep44423
19 sg:pub.10.1186/1471-2164-14-320
20 sg:pub.10.1186/1743-422x-7-313
21 https://app.dimensions.ai/details/publication/pub.1079518189
22 https://app.dimensions.ai/details/publication/pub.1080292415
23 https://app.dimensions.ai/details/publication/pub.1081725602
24 https://doi.org/10.1002/ece3.2991
25 https://doi.org/10.1016/0378-1135(96)00050-8
26 https://doi.org/10.1016/j.coviro.2014.09.017
27 https://doi.org/10.1016/j.meegid.2012.11.015
28 https://doi.org/10.1016/j.meegid.2016.05.018
29 https://doi.org/10.1016/j.virol.2010.04.004
30 https://doi.org/10.1016/j.virol.2016.03.004
31 https://doi.org/10.1016/j.virusres.2010.02.015
32 https://doi.org/10.1016/s0005-2736(03)00164-0
33 https://doi.org/10.1016/s0022-2836(05)80360-2
34 https://doi.org/10.1073/pnas.1706359114
35 https://doi.org/10.1080/01652176.2015.1046014
36 https://doi.org/10.1093/bioinformatics/btm404
37 https://doi.org/10.1093/molbev/mst197
38 https://doi.org/10.1093/molbev/msw054
39 https://doi.org/10.1093/nar/gkw822
40 https://doi.org/10.1093/oxfordjournals.molbev.a040752
41 https://doi.org/10.1099/0022-1317-49-2-255
42 https://doi.org/10.1099/0022-1317-53-1-67
43 https://doi.org/10.1099/00221287-19-3-592
44 https://doi.org/10.1099/vir.0.066498-0
45 https://doi.org/10.1101/pdb.top17
46 https://doi.org/10.1111/tbed.12269
47 https://doi.org/10.1126/science.76.1958.34-a
48 https://doi.org/10.1128/aem.01525-14
49 https://doi.org/10.1128/aem.71.8.4679-4689.2005
50 https://doi.org/10.1128/genomea.00868-14
51 https://doi.org/10.1128/jvi.00680-17
52 https://doi.org/10.1128/jvi.03464-12
53 https://doi.org/10.1128/jvi.05838-11
54 https://doi.org/10.1128/jvi.06540-11
55 https://doi.org/10.1371/journal.pone.0072787
56 https://doi.org/10.1371/journal.pone.0129256
57 https://doi.org/10.1371/journal.pone.0139810
58 https://doi.org/10.1371/journal.pone.0151921
59 https://doi.org/10.1556/avet.58.2010.1.5
60 https://doi.org/10.20506/rst.19.2.1231
61 https://doi.org/10.3109/19401736.2013.784756
62 https://doi.org/10.3109/19401736.2014.945540
63 https://doi.org/10.3201/eid1409.080570
64 https://doi.org/10.3201/eid1703.101410
65 https://doi.org/10.3201/eid2101.140766
66 https://doi.org/10.3390/v8030077
67 https://doi.org/10.7589/0090-3558-40.4.639
68 https://doi.org/10.7589/0090-3558-46.2.649
69 schema:datePublished 2018-12
70 schema:datePublishedReg 2018-12-01
71 schema:description We present an optimised metagenomics method for detection and characterisation of all virus types including single and double stranded DNA/RNA and enveloped and non-enveloped viruses. Initial evaluation included both spiked and non-spiked bird faecal samples as well as non-spiked human faecal samples. From the non-spiked bird samples (Australian Muscovy duck and Pacific black ducks) we detected 21 viruses, and we also present a summary of a few viruses detected in human faecal samples. We then present a detailed analysis of selected virus sequences in the avian samples that were somewhat similar to known viruses, and had good quality (Q20 or higher) and quantity of next-generation sequencing reads, and was of interest from a virological point of view, for example, avian coronavirus and avian paramyxovirus 6. Some of these viruses were closely related to known viruses while others were more distantly related with 70% or less identity to currently known/sequenced viruses. Besides detecting viruses, the technique also allowed the characterisation of host mitochondrial DNA present and thus identifying host species, while ribosomal RNA sequences provided insight into the "ribosomal activity microbiome"; of gut parasites; and of food eaten such as plants or insects, which we correlated to non-avian host associated viruses.
72 schema:genre research_article
73 schema:inLanguage en
74 schema:isAccessibleForFree true
75 schema:isPartOf N29b75471095a4d75903e8f80f27a1278
76 N2f50c688a31043509b8eeb87a2c0bfe7
77 sg:journal.1045337
78 schema:name Metagenomics detection and characterisation of viruses in faecal samples from Australian wild birds
79 schema:pagination 8686
80 schema:productId N05c3eeeaddfc49eea5bb57d4f3650f3b
81 N1ecc0fb4dfea48cc81cbbdefe55510f8
82 N506818ea1aec4b40bbcc909cbda9b9c0
83 Nbac193b826314f3d9891bac87d7d4919
84 Ned01dedc914f419aa79f5cf8e3568ad0
85 schema:sameAs https://app.dimensions.ai/details/publication/pub.1104336756
86 https://doi.org/10.1038/s41598-018-26851-1
87 schema:sdDatePublished 2019-04-10T13:32
88 schema:sdLicense https://scigraph.springernature.com/explorer/license/
89 schema:sdPublisher Ndf4eaa22df9d4c67be1e2c25dcd13ab8
90 schema:url https://www.nature.com/articles/s41598-018-26851-1
91 sgo:license sg:explorer/license/
92 sgo:sdDataset articles
93 rdf:type schema:ScholarlyArticle
94 N05c3eeeaddfc49eea5bb57d4f3650f3b schema:name doi
95 schema:value 10.1038/s41598-018-26851-1
96 rdf:type schema:PropertyValue
97 N1ecc0fb4dfea48cc81cbbdefe55510f8 schema:name readcube_id
98 schema:value 49a2c33ada8546327a98e075c3fc6516768122b933d18d7f2923620102c7dbf7
99 rdf:type schema:PropertyValue
100 N29b75471095a4d75903e8f80f27a1278 schema:issueNumber 1
101 rdf:type schema:PublicationIssue
102 N2e738f99fe25447ca006cb53d52b9795 rdf:first sg:person.01333270541.80
103 rdf:rest Nadbb9eb4dbe5418fbd7679e1ae962754
104 N2f50c688a31043509b8eeb87a2c0bfe7 schema:volumeNumber 8
105 rdf:type schema:PublicationVolume
106 N4f12c8df3a7b4c5db1095c4c209f30da rdf:first sg:person.010571004502.26
107 rdf:rest Ndbefe6980c5441078bd7e3d782df97e9
108 N506818ea1aec4b40bbcc909cbda9b9c0 schema:name pubmed_id
109 schema:value 29875375
110 rdf:type schema:PropertyValue
111 N65f4b4e3dbae4fea85a425623e63c50f rdf:first sg:person.0742103064.12
112 rdf:rest Ncbf4855b38c7444cb4e840bc807f0f99
113 Nadbb9eb4dbe5418fbd7679e1ae962754 rdf:first sg:person.01050036006.44
114 rdf:rest N65f4b4e3dbae4fea85a425623e63c50f
115 Nbac193b826314f3d9891bac87d7d4919 schema:name nlm_unique_id
116 schema:value 101563288
117 rdf:type schema:PropertyValue
118 Ncbf4855b38c7444cb4e840bc807f0f99 rdf:first sg:person.0600436641.84
119 rdf:rest rdf:nil
120 Ndbefe6980c5441078bd7e3d782df97e9 rdf:first sg:person.01214703333.09
121 rdf:rest N2e738f99fe25447ca006cb53d52b9795
122 Ndf4eaa22df9d4c67be1e2c25dcd13ab8 schema:name Springer Nature - SN SciGraph project
123 rdf:type schema:Organization
124 Ned01dedc914f419aa79f5cf8e3568ad0 schema:name dimensions_id
125 schema:value pub.1104336756
126 rdf:type schema:PropertyValue
127 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
128 schema:name Biological Sciences
129 rdf:type schema:DefinedTerm
130 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
131 schema:name Genetics
132 rdf:type schema:DefinedTerm
133 sg:grant.6939348 http://pending.schema.org/fundedItem sg:pub.10.1038/s41598-018-26851-1
134 rdf:type schema:MonetaryGrant
135 sg:grant.6939678 http://pending.schema.org/fundedItem sg:pub.10.1038/s41598-018-26851-1
136 rdf:type schema:MonetaryGrant
137 sg:journal.1045337 schema:issn 2045-2322
138 schema:name Scientific Reports
139 rdf:type schema:Periodical
140 sg:person.01050036006.44 schema:affiliation https://www.grid.ac/institutes/grid.1021.2
141 schema:familyName Klaassen
142 schema:givenName Marcel
143 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01050036006.44
144 rdf:type schema:Person
145 sg:person.010571004502.26 schema:affiliation https://www.grid.ac/institutes/grid.1021.2
146 schema:familyName Vibin
147 schema:givenName Jessy
148 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010571004502.26
149 rdf:type schema:Person
150 sg:person.01214703333.09 schema:affiliation https://www.grid.ac/institutes/grid.1021.2
151 schema:familyName Chamings
152 schema:givenName Anthony
153 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01214703333.09
154 rdf:type schema:Person
155 sg:person.01333270541.80 schema:affiliation https://www.grid.ac/institutes/grid.415335.5
156 schema:familyName Collier
157 schema:givenName Fiona
158 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01333270541.80
159 rdf:type schema:Person
160 sg:person.0600436641.84 schema:affiliation https://www.grid.ac/institutes/grid.415335.5
161 schema:familyName Alexandersen
162 schema:givenName Soren
163 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0600436641.84
164 rdf:type schema:Person
165 sg:person.0742103064.12 schema:affiliation https://www.grid.ac/institutes/grid.1021.2
166 schema:familyName Nelson
167 schema:givenName Tiffanie M.
168 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0742103064.12
169 rdf:type schema:Person
170 sg:pub.10.1007/978-1-4615-5341-0_2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026001573
171 https://doi.org/10.1007/978-1-4615-5341-0_2
172 rdf:type schema:CreativeWork
173 sg:pub.10.1007/bf01731581 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023239976
174 https://doi.org/10.1007/bf01731581
175 rdf:type schema:CreativeWork
176 sg:pub.10.1007/s00705-011-0964-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036124699
177 https://doi.org/10.1007/s00705-011-0964-5
178 rdf:type schema:CreativeWork
179 sg:pub.10.1007/s00705-014-2162-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1037307032
180 https://doi.org/10.1007/s00705-014-2162-8
181 rdf:type schema:CreativeWork
182 sg:pub.10.1007/s00705-016-3029-y schema:sameAs https://app.dimensions.ai/details/publication/pub.1002682848
183 https://doi.org/10.1007/s00705-016-3029-y
184 rdf:type schema:CreativeWork
185 sg:pub.10.1038/emi.2017.20 schema:sameAs https://app.dimensions.ai/details/publication/pub.1085575324
186 https://doi.org/10.1038/emi.2017.20
187 rdf:type schema:CreativeWork
188 sg:pub.10.1038/nature20167 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024156938
189 https://doi.org/10.1038/nature20167
190 rdf:type schema:CreativeWork
191 sg:pub.10.1038/nm.3950 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044921131
192 https://doi.org/10.1038/nm.3950
193 rdf:type schema:CreativeWork
194 sg:pub.10.1038/nprot.2009.10 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007448515
195 https://doi.org/10.1038/nprot.2009.10
196 rdf:type schema:CreativeWork
197 sg:pub.10.1038/s41467-017-01086-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1092102050
198 https://doi.org/10.1038/s41467-017-01086-2
199 rdf:type schema:CreativeWork
200 sg:pub.10.1038/s41598-017-04145-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1086075176
201 https://doi.org/10.1038/s41598-017-04145-2
202 rdf:type schema:CreativeWork
203 sg:pub.10.1038/s41598-017-07290-w schema:sameAs https://app.dimensions.ai/details/publication/pub.1090931403
204 https://doi.org/10.1038/s41598-017-07290-w
205 rdf:type schema:CreativeWork
206 sg:pub.10.1038/s41598-018-24407-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1103249578
207 https://doi.org/10.1038/s41598-018-24407-x
208 rdf:type schema:CreativeWork
209 sg:pub.10.1038/srep16532 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009597972
210 https://doi.org/10.1038/srep16532
211 rdf:type schema:CreativeWork
212 sg:pub.10.1038/srep44423 schema:sameAs https://app.dimensions.ai/details/publication/pub.1084132313
213 https://doi.org/10.1038/srep44423
214 rdf:type schema:CreativeWork
215 sg:pub.10.1186/1471-2164-14-320 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030632316
216 https://doi.org/10.1186/1471-2164-14-320
217 rdf:type schema:CreativeWork
218 sg:pub.10.1186/1743-422x-7-313 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003970805
219 https://doi.org/10.1186/1743-422x-7-313
220 rdf:type schema:CreativeWork
221 https://app.dimensions.ai/details/publication/pub.1079518189 schema:CreativeWork
222 https://app.dimensions.ai/details/publication/pub.1080292415 schema:CreativeWork
223 https://app.dimensions.ai/details/publication/pub.1081725602 schema:CreativeWork
224 https://doi.org/10.1002/ece3.2991 schema:sameAs https://app.dimensions.ai/details/publication/pub.1085074362
225 rdf:type schema:CreativeWork
226 https://doi.org/10.1016/0378-1135(96)00050-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1018500308
227 rdf:type schema:CreativeWork
228 https://doi.org/10.1016/j.coviro.2014.09.017 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043034939
229 rdf:type schema:CreativeWork
230 https://doi.org/10.1016/j.meegid.2012.11.015 schema:sameAs https://app.dimensions.ai/details/publication/pub.1016152259
231 rdf:type schema:CreativeWork
232 https://doi.org/10.1016/j.meegid.2016.05.018 schema:sameAs https://app.dimensions.ai/details/publication/pub.1016994901
233 rdf:type schema:CreativeWork
234 https://doi.org/10.1016/j.virol.2010.04.004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049176005
235 rdf:type schema:CreativeWork
236 https://doi.org/10.1016/j.virol.2016.03.004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042569536
237 rdf:type schema:CreativeWork
238 https://doi.org/10.1016/j.virusres.2010.02.015 schema:sameAs https://app.dimensions.ai/details/publication/pub.1053680330
239 rdf:type schema:CreativeWork
240 https://doi.org/10.1016/s0005-2736(03)00164-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021041901
241 rdf:type schema:CreativeWork
242 https://doi.org/10.1016/s0022-2836(05)80360-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013618994
243 rdf:type schema:CreativeWork
244 https://doi.org/10.1073/pnas.1706359114 schema:sameAs https://app.dimensions.ai/details/publication/pub.1090619171
245 rdf:type schema:CreativeWork
246 https://doi.org/10.1080/01652176.2015.1046014 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046890792
247 rdf:type schema:CreativeWork
248 https://doi.org/10.1093/bioinformatics/btm404 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007683223
249 rdf:type schema:CreativeWork
250 https://doi.org/10.1093/molbev/mst197 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001444669
251 rdf:type schema:CreativeWork
252 https://doi.org/10.1093/molbev/msw054 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012564990
253 rdf:type schema:CreativeWork
254 https://doi.org/10.1093/nar/gkw822 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007436514
255 rdf:type schema:CreativeWork
256 https://doi.org/10.1093/oxfordjournals.molbev.a040752 schema:sameAs https://app.dimensions.ai/details/publication/pub.1077145115
257 rdf:type schema:CreativeWork
258 https://doi.org/10.1099/0022-1317-49-2-255 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060353619
259 rdf:type schema:CreativeWork
260 https://doi.org/10.1099/0022-1317-53-1-67 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060354350
261 rdf:type schema:CreativeWork
262 https://doi.org/10.1099/00221287-19-3-592 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060371612
263 rdf:type schema:CreativeWork
264 https://doi.org/10.1099/vir.0.066498-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060399577
265 rdf:type schema:CreativeWork
266 https://doi.org/10.1101/pdb.top17 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060415540
267 rdf:type schema:CreativeWork
268 https://doi.org/10.1111/tbed.12269 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050519337
269 rdf:type schema:CreativeWork
270 https://doi.org/10.1126/science.76.1958.34-a schema:sameAs https://app.dimensions.ai/details/publication/pub.1062647608
271 rdf:type schema:CreativeWork
272 https://doi.org/10.1128/aem.01525-14 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041351559
273 rdf:type schema:CreativeWork
274 https://doi.org/10.1128/aem.71.8.4679-4689.2005 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002253325
275 rdf:type schema:CreativeWork
276 https://doi.org/10.1128/genomea.00868-14 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046955884
277 rdf:type schema:CreativeWork
278 https://doi.org/10.1128/jvi.00680-17 schema:sameAs https://app.dimensions.ai/details/publication/pub.1086132817
279 rdf:type schema:CreativeWork
280 https://doi.org/10.1128/jvi.03464-12 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044643420
281 rdf:type schema:CreativeWork
282 https://doi.org/10.1128/jvi.05838-11 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028548587
283 rdf:type schema:CreativeWork
284 https://doi.org/10.1128/jvi.06540-11 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026613775
285 rdf:type schema:CreativeWork
286 https://doi.org/10.1371/journal.pone.0072787 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035580649
287 rdf:type schema:CreativeWork
288 https://doi.org/10.1371/journal.pone.0129256 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041801583
289 rdf:type schema:CreativeWork
290 https://doi.org/10.1371/journal.pone.0139810 schema:sameAs https://app.dimensions.ai/details/publication/pub.1033055417
291 rdf:type schema:CreativeWork
292 https://doi.org/10.1371/journal.pone.0151921 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010353107
293 rdf:type schema:CreativeWork
294 https://doi.org/10.1556/avet.58.2010.1.5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1067882241
295 rdf:type schema:CreativeWork
296 https://doi.org/10.20506/rst.19.2.1231 schema:sameAs https://app.dimensions.ai/details/publication/pub.1068791751
297 rdf:type schema:CreativeWork
298 https://doi.org/10.3109/19401736.2013.784756 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008714766
299 rdf:type schema:CreativeWork
300 https://doi.org/10.3109/19401736.2014.945540 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038015771
301 rdf:type schema:CreativeWork
302 https://doi.org/10.3201/eid1409.080570 schema:sameAs https://app.dimensions.ai/details/publication/pub.1048942297
303 rdf:type schema:CreativeWork
304 https://doi.org/10.3201/eid1703.101410 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014110285
305 rdf:type schema:CreativeWork
306 https://doi.org/10.3201/eid2101.140766 schema:sameAs https://app.dimensions.ai/details/publication/pub.1011293834
307 rdf:type schema:CreativeWork
308 https://doi.org/10.3390/v8030077 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031986685
309 rdf:type schema:CreativeWork
310 https://doi.org/10.7589/0090-3558-40.4.639 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028515333
311 rdf:type schema:CreativeWork
312 https://doi.org/10.7589/0090-3558-46.2.649 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049768299
313 rdf:type schema:CreativeWork
314 https://www.grid.ac/institutes/grid.1021.2 schema:alternateName Deakin University
315 schema:name Deakin University, Victoria, 3220, Geelong, Australia
316 Geelong Centre for Emerging Infectious Diseases, Victoria, 3220, Geelong, Australia
317 rdf:type schema:Organization
318 https://www.grid.ac/institutes/grid.415335.5 schema:alternateName Geelong Hospital
319 schema:name Barwon Health, University Hospital Geelong, 3220, Geelong, Victoria, Australia
320 Deakin University, Victoria, 3220, Geelong, Australia
321 Geelong Centre for Emerging Infectious Diseases, Victoria, 3220, Geelong, Australia
322 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...