Transcriptomic profiling of hemp bast fibres at different developmental stages View Full Text


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Article Info

DATE

2017-07-10

AUTHORS

Gea Guerriero, Marc Behr, Sylvain Legay, Lauralie Mangeot-Peter, Simone Zorzan, Mohammad Ghoniem, Jean-Francois Hausman

ABSTRACT

Bast fibres are long extraxylary cells which mechanically support the phloem and they are divided into xylan- and gelatinous-type, depending on the composition of their secondary cell walls. The former, typical of jute/kenaf bast fibres, are characterized by the presence of xylan and a high degree of lignification, while the latter, found in tension wood, as well as flax, ramie and hemp bast fibres, have a high abundance of crystalline cellulose. During their differentiation, bast fibres undergo specific developmental stages: the cells initially elongate rapidly by intrusive growth, subsequently they cease elongation and start to thicken. The goal of the present study is to provide a transcriptomic close-up of the key events accompanying bast fibre development in textile hemp (Cannabis sativa L.), a fibre crop of great importance. Bast fibres have been sampled from different stem regions. The developmental stages corresponding to active elongation and cell wall thickening have been studied using RNA-Seq. The results show that the fibres sampled at each stem region are characterized by a specific transcriptomic signature and that the major changes in cell wall-related processes take place at the internode containing the snap point. The data generated also identify several interesting candidates for future functional analysis. More... »

PAGES

4961

References to SciGraph publications

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  • 2013-10-16. Arabidopsis WAT1 is a vacuolar auxin transport facilitator required for auxin homoeostasis in NATURE COMMUNICATIONS
  • <error retrieving object. in <ERROR RETRIEVING OBJECT
  • 2014-10-16. Identification of differentially expressed transcripts associated with bast fibre development in Corchorus capsularis by suppression subtractive hybridization in PLANTA
  • 2017-01-30. Comparative genomics of two jute species and insight into fibre biogenesis in NATURE PLANTS
  • 2011-10-20. The draft genome and transcriptome of Cannabis sativa in GENOME BIOLOGY
  • 2005-10-08. Intrusive growth of flax phloem fibers is of intercalary type in PLANTA
  • Identifiers

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    http://scigraph.springernature.com/pub.10.1038/s41598-017-05200-8

    DOI

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    DIMENSIONS

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    33 schema:description Bast fibres are long extraxylary cells which mechanically support the phloem and they are divided into xylan- and gelatinous-type, depending on the composition of their secondary cell walls. The former, typical of jute/kenaf bast fibres, are characterized by the presence of xylan and a high degree of lignification, while the latter, found in tension wood, as well as flax, ramie and hemp bast fibres, have a high abundance of crystalline cellulose. During their differentiation, bast fibres undergo specific developmental stages: the cells initially elongate rapidly by intrusive growth, subsequently they cease elongation and start to thicken. The goal of the present study is to provide a transcriptomic close-up of the key events accompanying bast fibre development in textile hemp (Cannabis sativa L.), a fibre crop of great importance. Bast fibres have been sampled from different stem regions. The developmental stages corresponding to active elongation and cell wall thickening have been studied using RNA-Seq. The results show that the fibres sampled at each stem region are characterized by a specific transcriptomic signature and that the major changes in cell wall-related processes take place at the internode containing the snap point. The data generated also identify several interesting candidates for future functional analysis.
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