The survey and reference assisted assembly of the Octopus vulgaris genome View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2019-12

AUTHORS

Ilaria Zarrella, Koen Herten, Gregory E Maes, Shuaishuai Tai, Ming Yang, Eve Seuntjens, Elena A Ritschard, Michael Zach, Ruth Styfhals, Remo Sanges, Oleg Simakov, Giovanna Ponte, Graziano Fiorito

ABSTRACT

The common octopus, Octopus vulgaris, is an active marine predator known for the richness and plasticity of its behavioral repertoire, and remarkable learning and memory capabilities. Octopus and other coleoid cephalopods, cuttlefish and squid, possess the largest nervous system among invertebrates, both for cell counts and body to brain size. O. vulgaris has been at the center of a long-tradition of research into diverse aspects of its biology. To leverage research in this iconic species, we generated 270 Gb of genomic sequencing data, complementing those available for the only other sequenced congeneric octopus, Octopus bimaculoides. We show that both genomes are similar in size, but display different levels of heterozygosity and repeats. Our data give a first quantitative glimpse into the rate of coding and non-coding regions and support the view that hundreds of novel genes may have arisen independently despite the close phylogenetic distance. We furthermore describe a reference-guided assembly and an open genomic resource (CephRes-gdatabase), opening new avenues in the study of genomic novelties in cephalopods and their biology. More... »

PAGES

13

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/s41597-019-0017-6

DOI

http://dx.doi.org/10.1038/s41597-019-0017-6

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1113159505

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/30931949


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "name": [
            "Association for Cephalopod Research 'CephRes', Napoli, Italy."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Zarrella", 
        "givenName": "Ilaria", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "KU Leuven", 
          "id": "https://www.grid.ac/institutes/grid.5596.f", 
          "name": [
            "Genomics Core, KU Leuven, Leuven, Belgium.", 
            "Laboratory for Cytogenetics and Genome Research, Center for Human Genetics, KU Leuven, Leuven, Belgium."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Herten", 
        "givenName": "Koen", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "James Cook University", 
          "id": "https://www.grid.ac/institutes/grid.1011.1", 
          "name": [
            "Laboratory for Cytogenetics and Genome Research, Center for Human Genetics, KU Leuven, Leuven, Belgium.", 
            "Laboratory of Biodiversity and Evolutionary Genomics, KU Leuven, Leuven, Belgium.", 
            "Centre for Sustainable Tropical Fisheries and Aquaculture, Comparative Genomics Centre, College of Science and Engineering, James Cook University, Townsville, 4811, QLD, Australia."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Maes", 
        "givenName": "Gregory E", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Beijing Genomics Institute", 
          "id": "https://www.grid.ac/institutes/grid.21155.32", 
          "name": [
            "BGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Tai", 
        "givenName": "Shuaishuai", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Beijing Genomics Institute", 
          "id": "https://www.grid.ac/institutes/grid.21155.32", 
          "name": [
            "BGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Yang", 
        "givenName": "Ming", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "KU Leuven", 
          "id": "https://www.grid.ac/institutes/grid.5596.f", 
          "name": [
            "Laboratory of Developmental Neurobiology, Department of Biology, KU Leuven, Leuven, Belgium."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Seuntjens", 
        "givenName": "Eve", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Vienna", 
          "id": "https://www.grid.ac/institutes/grid.10420.37", 
          "name": [
            "Department of Molecular Evolution and Development, University of Vienna, Vienna, Austria."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ritschard", 
        "givenName": "Elena A", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Vienna", 
          "id": "https://www.grid.ac/institutes/grid.10420.37", 
          "name": [
            "Department of Molecular Evolution and Development, University of Vienna, Vienna, Austria."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Zach", 
        "givenName": "Michael", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "KU Leuven", 
          "id": "https://www.grid.ac/institutes/grid.5596.f", 
          "name": [
            "Laboratory of Developmental Neurobiology, Department of Biology, KU Leuven, Leuven, Belgium.", 
            "Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn Napoli, Napoli, Italy."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Styfhals", 
        "givenName": "Ruth", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn Napoli, Napoli, Italy."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Sanges", 
        "givenName": "Remo", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Vienna", 
          "id": "https://www.grid.ac/institutes/grid.10420.37", 
          "name": [
            "Department of Molecular Evolution and Development, University of Vienna, Vienna, Austria. oleg.simakov@univie.ac.at."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Simakov", 
        "givenName": "Oleg", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Association for Cephalopod Research 'CephRes', Napoli, Italy.", 
            "Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn Napoli, Napoli, Italy."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ponte", 
        "givenName": "Giovanna", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn Napoli, Napoli, Italy. graziano.fiorito@szn.it."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Fiorito", 
        "givenName": "Graziano", 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1093/bioinformatics/btt086", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000520351"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3109/19401736.2014.919488", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001266449"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/gbe/evv050", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1001688447"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.fsi.2015.05.004", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002620967"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0065-3454(08)60398-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003733590"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s10158-013-0147-z", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004535469", 
          "https://doi.org/10.1007/s10158-013-0147-z"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature01872", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005013240", 
          "https://doi.org/10.1038/nature01872"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature01872", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005013240", 
          "https://doi.org/10.1038/nature01872"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nmeth.1923", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006541515", 
          "https://doi.org/10.1038/nmeth.1923"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.conb.2015.06.012", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006567275"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/11.15.5159", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007243976"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0079516", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1009897448"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0042546", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010562120"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.4056/sigs.3136559", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010694525", 
          "https://doi.org/10.4056/sigs.3136559"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.089532.108", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011404279"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0022-2836(05)80360-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013618994"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.pt.2006.02.008", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013748096"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/s12864-015-1648-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013757203", 
          "https://doi.org/10.1186/s12864-015-1648-4"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/s12864-015-1648-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013757203", 
          "https://doi.org/10.1186/s12864-015-1648-4"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature11696", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014147293", 
          "https://doi.org/10.1038/nature11696"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/bies.201100001", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015883657"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jembe.2013.02.010", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017617415"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1080/00222933.2013.825342", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020894682"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00438-015-1119-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022539318", 
          "https://doi.org/10.1007/s00438-015-1119-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/s00438-015-1119-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022539318", 
          "https://doi.org/10.1007/s00438-015-1119-2"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.229102", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022792016"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.concog.2006.11.006", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023297673"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1212795", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023644597"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1469-185x.1972.tb00975.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024741905"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.tins.2009.05.008", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026805857"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0120732", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027485563"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1152/physiol.00029.2012", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027889608"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.gene.2011.05.027", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1028729105"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0151561", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029308215"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0151561", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029308215"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature11413", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029552088", 
          "https://doi.org/10.1038/nature11413"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btr011", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032486702"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btu023", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1034986720"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/s40851-015-0026-z", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035372962", 
          "https://doi.org/10.1186/s40851-015-0026-z"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/zsc.12207", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035474128"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1177/0023677215580006", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1037390383"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1177/0023677215580006", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1037390383"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-94-017-2468-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038789911", 
          "https://doi.org/10.1007/978-94-017-2468-5"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-94-017-2468-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038789911", 
          "https://doi.org/10.1007/978-94-017-2468-5"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1095-8649.2000.tb00748.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038895868"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1095-8649.2000.tb00748.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038895868"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/gkw294", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041063824"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0149496", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041604960"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0149496", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041604960"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0149496", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041604960"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btu170", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042720804"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.fsi.2016.03.010", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043627030"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3389/fevo.2014.00055", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046710080"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/bies.950100213", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049303658"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature14668", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049825665", 
          "https://doi.org/10.1038/nature14668"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1122033", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062453353"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/1542389", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1069532554"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.5479/si.00810282.513", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1072905639"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/gbe/evx032", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1083842464"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.214346.116", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1083862088"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.cell.2017.03.025", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1084524343"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41559-017-0120", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1084537824", 
          "https://doi.org/10.1038/s41559-017-0120"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41559-017-0120", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1084537824", 
          "https://doi.org/10.1038/s41559-017-0120"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41559-017-0121", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1084537825", 
          "https://doi.org/10.1038/s41559-017-0121"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/s41559-017-0121", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1084537825", 
          "https://doi.org/10.1038/s41559-017-0121"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3389/fcell.2017.00053", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1085410815"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.cobeha.2017.06.008", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1090805461"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/gigascience/gix059", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1090959675"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/gigascience/gix120", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1099600518"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/gigascience/gix128", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1099841369"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/molbev/msx319", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1099877235"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.7717/peerj.4331", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1101015919"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1098/rsif.2017.0889", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1103204676"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1098/rsif.2017.0889", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1103204676"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1098/rsif.2017.0889", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1103204676"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3389/fphys.2018.00593", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1104151136"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3389/fphys.2018.00700", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1104408705"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3389/fcomm.2018.00020", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1104546650"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.3389/fphys.2018.00952", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1105710663"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/gigascience/giy119", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1107222538"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/gigascience/giy119", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1107222538"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1817322116", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1111367362"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1817322116", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1111367362"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1817322116", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1111367362"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1817322116", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1111367362"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1817322116", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1111367362"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2019-12", 
    "datePublishedReg": "2019-12-01", 
    "description": "The common octopus, Octopus vulgaris, is an active marine predator known for the richness and plasticity of its behavioral repertoire, and remarkable learning and memory capabilities. Octopus and other coleoid cephalopods, cuttlefish and squid, possess the largest nervous system among invertebrates, both for cell counts and body to brain size. O. vulgaris has been at the center of a long-tradition of research into diverse aspects of its biology. To leverage research in this iconic species, we generated 270\u2009Gb of genomic sequencing data, complementing those available for the only other sequenced congeneric octopus, Octopus bimaculoides. We show that both genomes are similar in size, but display different levels of heterozygosity and repeats. Our data give a first quantitative glimpse into the rate of coding and non-coding regions and support the view that hundreds of novel genes may have arisen independently despite the close phylogenetic distance. We furthermore describe a reference-guided assembly and an open genomic resource (CephRes-gdatabase), opening new avenues in the study of genomic novelties in cephalopods and their biology.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1038/s41597-019-0017-6", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1050678", 
        "issn": [
          "2052-4463"
        ], 
        "name": "Scientific Data", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "6"
      }
    ], 
    "name": "The survey and reference assisted assembly of the Octopus vulgaris genome", 
    "pagination": "13", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "782e1b830639dce02c991750952f9f9d2ca2423ae28cfb38c366583e815b5e10"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "30931949"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "101640192"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1038/s41597-019-0017-6"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1113159505"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1038/s41597-019-0017-6", 
      "https://app.dimensions.ai/details/publication/pub.1113159505"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T14:01", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000371_0000000371/records_130829_00000006.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://www.nature.com/articles/s41597-019-0017-6"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/s41597-019-0017-6'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/s41597-019-0017-6'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/s41597-019-0017-6'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/s41597-019-0017-6'


 

This table displays all metadata directly associated to this object as RDF triples.

380 TRIPLES      21 PREDICATES      97 URIs      21 LITERALS      9 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1038/s41597-019-0017-6 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N0208c274c6044d03b86141a28f72cd82
4 schema:citation sg:pub.10.1007/978-94-017-2468-5
5 sg:pub.10.1007/s00438-015-1119-2
6 sg:pub.10.1007/s10158-013-0147-z
7 sg:pub.10.1038/nature01872
8 sg:pub.10.1038/nature11413
9 sg:pub.10.1038/nature11696
10 sg:pub.10.1038/nature14668
11 sg:pub.10.1038/nmeth.1923
12 sg:pub.10.1038/s41559-017-0120
13 sg:pub.10.1038/s41559-017-0121
14 sg:pub.10.1186/s12864-015-1648-4
15 sg:pub.10.1186/s40851-015-0026-z
16 sg:pub.10.4056/sigs.3136559
17 https://doi.org/10.1002/bies.201100001
18 https://doi.org/10.1002/bies.950100213
19 https://doi.org/10.1016/j.cell.2017.03.025
20 https://doi.org/10.1016/j.cobeha.2017.06.008
21 https://doi.org/10.1016/j.conb.2015.06.012
22 https://doi.org/10.1016/j.concog.2006.11.006
23 https://doi.org/10.1016/j.fsi.2015.05.004
24 https://doi.org/10.1016/j.fsi.2016.03.010
25 https://doi.org/10.1016/j.gene.2011.05.027
26 https://doi.org/10.1016/j.jembe.2013.02.010
27 https://doi.org/10.1016/j.pt.2006.02.008
28 https://doi.org/10.1016/j.tins.2009.05.008
29 https://doi.org/10.1016/s0022-2836(05)80360-2
30 https://doi.org/10.1016/s0065-3454(08)60398-8
31 https://doi.org/10.1073/pnas.1817322116
32 https://doi.org/10.1080/00222933.2013.825342
33 https://doi.org/10.1093/bioinformatics/btr011
34 https://doi.org/10.1093/bioinformatics/btt086
35 https://doi.org/10.1093/bioinformatics/btu023
36 https://doi.org/10.1093/bioinformatics/btu170
37 https://doi.org/10.1093/gbe/evv050
38 https://doi.org/10.1093/gbe/evx032
39 https://doi.org/10.1093/gigascience/gix059
40 https://doi.org/10.1093/gigascience/gix120
41 https://doi.org/10.1093/gigascience/gix128
42 https://doi.org/10.1093/gigascience/giy119
43 https://doi.org/10.1093/molbev/msx319
44 https://doi.org/10.1093/nar/11.15.5159
45 https://doi.org/10.1093/nar/gkw294
46 https://doi.org/10.1098/rsif.2017.0889
47 https://doi.org/10.1101/gr.089532.108
48 https://doi.org/10.1101/gr.214346.116
49 https://doi.org/10.1101/gr.229102
50 https://doi.org/10.1111/j.1095-8649.2000.tb00748.x
51 https://doi.org/10.1111/j.1469-185x.1972.tb00975.x
52 https://doi.org/10.1111/zsc.12207
53 https://doi.org/10.1126/science.1122033
54 https://doi.org/10.1126/science.1212795
55 https://doi.org/10.1152/physiol.00029.2012
56 https://doi.org/10.1177/0023677215580006
57 https://doi.org/10.1371/journal.pone.0042546
58 https://doi.org/10.1371/journal.pone.0079516
59 https://doi.org/10.1371/journal.pone.0120732
60 https://doi.org/10.1371/journal.pone.0149496
61 https://doi.org/10.1371/journal.pone.0151561
62 https://doi.org/10.2307/1542389
63 https://doi.org/10.3109/19401736.2014.919488
64 https://doi.org/10.3389/fcell.2017.00053
65 https://doi.org/10.3389/fcomm.2018.00020
66 https://doi.org/10.3389/fevo.2014.00055
67 https://doi.org/10.3389/fphys.2018.00593
68 https://doi.org/10.3389/fphys.2018.00700
69 https://doi.org/10.3389/fphys.2018.00952
70 https://doi.org/10.5479/si.00810282.513
71 https://doi.org/10.7717/peerj.4331
72 schema:datePublished 2019-12
73 schema:datePublishedReg 2019-12-01
74 schema:description The common octopus, Octopus vulgaris, is an active marine predator known for the richness and plasticity of its behavioral repertoire, and remarkable learning and memory capabilities. Octopus and other coleoid cephalopods, cuttlefish and squid, possess the largest nervous system among invertebrates, both for cell counts and body to brain size. O. vulgaris has been at the center of a long-tradition of research into diverse aspects of its biology. To leverage research in this iconic species, we generated 270 Gb of genomic sequencing data, complementing those available for the only other sequenced congeneric octopus, Octopus bimaculoides. We show that both genomes are similar in size, but display different levels of heterozygosity and repeats. Our data give a first quantitative glimpse into the rate of coding and non-coding regions and support the view that hundreds of novel genes may have arisen independently despite the close phylogenetic distance. We furthermore describe a reference-guided assembly and an open genomic resource (CephRes-gdatabase), opening new avenues in the study of genomic novelties in cephalopods and their biology.
75 schema:genre research_article
76 schema:inLanguage en
77 schema:isAccessibleForFree false
78 schema:isPartOf N0fc01df005184a23b9c043a478e63145
79 N62bed97403f54a27ad10cd73e7755c45
80 sg:journal.1050678
81 schema:name The survey and reference assisted assembly of the Octopus vulgaris genome
82 schema:pagination 13
83 schema:productId N0aa028c670a84723bc24f92fcfc9039e
84 N5d1b8e8700fb43a2af03ab5aac40b143
85 N796ed4e57fcc4a938171f3d529a99bcb
86 Nc36045861cc94291a49832ff2157715f
87 Ncadd136a6d9b4578b75f2e5b1365a7f6
88 schema:sameAs https://app.dimensions.ai/details/publication/pub.1113159505
89 https://doi.org/10.1038/s41597-019-0017-6
90 schema:sdDatePublished 2019-04-11T14:01
91 schema:sdLicense https://scigraph.springernature.com/explorer/license/
92 schema:sdPublisher Ndbb69e3e8d3e4ba0b375016e00efb1d1
93 schema:url https://www.nature.com/articles/s41597-019-0017-6
94 sgo:license sg:explorer/license/
95 sgo:sdDataset articles
96 rdf:type schema:ScholarlyArticle
97 N0208c274c6044d03b86141a28f72cd82 rdf:first N2ca30ebd6f9349f49b768714f5c20d4e
98 rdf:rest N60b18226d48040d5863b10a41544059a
99 N0aa028c670a84723bc24f92fcfc9039e schema:name nlm_unique_id
100 schema:value 101640192
101 rdf:type schema:PropertyValue
102 N0e5f53a623e7487aa5c0b52c4fc7c867 rdf:first N7f94ca96cf404d24a09edde2b133959e
103 rdf:rest N89d41c2951ac41c8b7ea58ae186ed96a
104 N0f9d14c5c31d464da548c4fe873d8222 schema:name Association for Cephalopod Research 'CephRes', Napoli, Italy.
105 rdf:type schema:Organization
106 N0fc01df005184a23b9c043a478e63145 schema:issueNumber 1
107 rdf:type schema:PublicationIssue
108 N10fb97689db143999115b0038138ee34 schema:affiliation https://www.grid.ac/institutes/grid.5596.f
109 schema:familyName Seuntjens
110 schema:givenName Eve
111 rdf:type schema:Person
112 N24e030c9643b4223bec9128c23680044 rdf:first Nac2fd87358fe40339003f0dcdf849724
113 rdf:rest Nec51f17e2037432998c103f15b37abe4
114 N2ca30ebd6f9349f49b768714f5c20d4e schema:affiliation N0f9d14c5c31d464da548c4fe873d8222
115 schema:familyName Zarrella
116 schema:givenName Ilaria
117 rdf:type schema:Person
118 N2cd4b523aaee46cd8e8367f29a2cdca9 rdf:first N761f92f632764f26ad97e9a53437aba1
119 rdf:rest rdf:nil
120 N3405944785e64ab6983fb5b90b29de2e rdf:first Na1917b672b964bdcb61fd5e082cb5092
121 rdf:rest Ndd3a9cf9a4bb47bab3235c208bb3613c
122 N3aa613b666684ebba9a91339fa323c73 schema:affiliation https://www.grid.ac/institutes/grid.5596.f
123 schema:familyName Styfhals
124 schema:givenName Ruth
125 rdf:type schema:Person
126 N5d1b8e8700fb43a2af03ab5aac40b143 schema:name dimensions_id
127 schema:value pub.1113159505
128 rdf:type schema:PropertyValue
129 N60b18226d48040d5863b10a41544059a rdf:first N8e8ae9daa71643c9b05d5a68fc40b8b0
130 rdf:rest N3405944785e64ab6983fb5b90b29de2e
131 N62bed97403f54a27ad10cd73e7755c45 schema:volumeNumber 6
132 rdf:type schema:PublicationVolume
133 N63b900144cb342449bf6207dd0d9675a rdf:first N3aa613b666684ebba9a91339fa323c73
134 rdf:rest Ne5f1bdc52e514a9ca731a5950560ed89
135 N6d12ffb693164ec59f9a31f3507dcfc1 schema:name Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn Napoli, Napoli, Italy.
136 rdf:type schema:Organization
137 N6ed0ce00bacd468187f16d01ce309158 rdf:first N10fb97689db143999115b0038138ee34
138 rdf:rest N0e5f53a623e7487aa5c0b52c4fc7c867
139 N761f92f632764f26ad97e9a53437aba1 schema:affiliation Nc6d39c075f8544308b9cc556414cad5f
140 schema:familyName Fiorito
141 schema:givenName Graziano
142 rdf:type schema:Person
143 N764917b890be4417b2d6c042f72347cb schema:affiliation Nc2655aea88274dbd81d3531a29e2c623
144 schema:familyName Ponte
145 schema:givenName Giovanna
146 rdf:type schema:Person
147 N77a678dc4b444c96902eb086e12842eb schema:affiliation https://www.grid.ac/institutes/grid.21155.32
148 schema:familyName Yang
149 schema:givenName Ming
150 rdf:type schema:Person
151 N796ed4e57fcc4a938171f3d529a99bcb schema:name readcube_id
152 schema:value 782e1b830639dce02c991750952f9f9d2ca2423ae28cfb38c366583e815b5e10
153 rdf:type schema:PropertyValue
154 N7f94ca96cf404d24a09edde2b133959e schema:affiliation https://www.grid.ac/institutes/grid.10420.37
155 schema:familyName Ritschard
156 schema:givenName Elena A
157 rdf:type schema:Person
158 N84d721e7fda14a759381a7a4b6728916 rdf:first N77a678dc4b444c96902eb086e12842eb
159 rdf:rest N6ed0ce00bacd468187f16d01ce309158
160 N89d41c2951ac41c8b7ea58ae186ed96a rdf:first Nf37ace18825743ad91aefa1f5af85948
161 rdf:rest N63b900144cb342449bf6207dd0d9675a
162 N8e8ae9daa71643c9b05d5a68fc40b8b0 schema:affiliation https://www.grid.ac/institutes/grid.5596.f
163 schema:familyName Herten
164 schema:givenName Koen
165 rdf:type schema:Person
166 Na1917b672b964bdcb61fd5e082cb5092 schema:affiliation https://www.grid.ac/institutes/grid.1011.1
167 schema:familyName Maes
168 schema:givenName Gregory E
169 rdf:type schema:Person
170 Nac2fd87358fe40339003f0dcdf849724 schema:affiliation https://www.grid.ac/institutes/grid.10420.37
171 schema:familyName Simakov
172 schema:givenName Oleg
173 rdf:type schema:Person
174 Nc2655aea88274dbd81d3531a29e2c623 schema:name Association for Cephalopod Research 'CephRes', Napoli, Italy.
175 Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn Napoli, Napoli, Italy.
176 rdf:type schema:Organization
177 Nc36045861cc94291a49832ff2157715f schema:name pubmed_id
178 schema:value 30931949
179 rdf:type schema:PropertyValue
180 Nc6d39c075f8544308b9cc556414cad5f schema:name Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn Napoli, Napoli, Italy. graziano.fiorito@szn.it.
181 rdf:type schema:Organization
182 Ncadd136a6d9b4578b75f2e5b1365a7f6 schema:name doi
183 schema:value 10.1038/s41597-019-0017-6
184 rdf:type schema:PropertyValue
185 Nd50901a90acd454f9647e1a192ded2b9 schema:affiliation N6d12ffb693164ec59f9a31f3507dcfc1
186 schema:familyName Sanges
187 schema:givenName Remo
188 rdf:type schema:Person
189 Ndbb69e3e8d3e4ba0b375016e00efb1d1 schema:name Springer Nature - SN SciGraph project
190 rdf:type schema:Organization
191 Ndd3a9cf9a4bb47bab3235c208bb3613c rdf:first Nef373250d56443fc907bfbd6f65b7d58
192 rdf:rest N84d721e7fda14a759381a7a4b6728916
193 Ne5f1bdc52e514a9ca731a5950560ed89 rdf:first Nd50901a90acd454f9647e1a192ded2b9
194 rdf:rest N24e030c9643b4223bec9128c23680044
195 Nec51f17e2037432998c103f15b37abe4 rdf:first N764917b890be4417b2d6c042f72347cb
196 rdf:rest N2cd4b523aaee46cd8e8367f29a2cdca9
197 Nef373250d56443fc907bfbd6f65b7d58 schema:affiliation https://www.grid.ac/institutes/grid.21155.32
198 schema:familyName Tai
199 schema:givenName Shuaishuai
200 rdf:type schema:Person
201 Nf37ace18825743ad91aefa1f5af85948 schema:affiliation https://www.grid.ac/institutes/grid.10420.37
202 schema:familyName Zach
203 schema:givenName Michael
204 rdf:type schema:Person
205 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
206 schema:name Biological Sciences
207 rdf:type schema:DefinedTerm
208 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
209 schema:name Genetics
210 rdf:type schema:DefinedTerm
211 sg:journal.1050678 schema:issn 2052-4463
212 schema:name Scientific Data
213 rdf:type schema:Periodical
214 sg:pub.10.1007/978-94-017-2468-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038789911
215 https://doi.org/10.1007/978-94-017-2468-5
216 rdf:type schema:CreativeWork
217 sg:pub.10.1007/s00438-015-1119-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022539318
218 https://doi.org/10.1007/s00438-015-1119-2
219 rdf:type schema:CreativeWork
220 sg:pub.10.1007/s10158-013-0147-z schema:sameAs https://app.dimensions.ai/details/publication/pub.1004535469
221 https://doi.org/10.1007/s10158-013-0147-z
222 rdf:type schema:CreativeWork
223 sg:pub.10.1038/nature01872 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005013240
224 https://doi.org/10.1038/nature01872
225 rdf:type schema:CreativeWork
226 sg:pub.10.1038/nature11413 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029552088
227 https://doi.org/10.1038/nature11413
228 rdf:type schema:CreativeWork
229 sg:pub.10.1038/nature11696 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014147293
230 https://doi.org/10.1038/nature11696
231 rdf:type schema:CreativeWork
232 sg:pub.10.1038/nature14668 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049825665
233 https://doi.org/10.1038/nature14668
234 rdf:type schema:CreativeWork
235 sg:pub.10.1038/nmeth.1923 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006541515
236 https://doi.org/10.1038/nmeth.1923
237 rdf:type schema:CreativeWork
238 sg:pub.10.1038/s41559-017-0120 schema:sameAs https://app.dimensions.ai/details/publication/pub.1084537824
239 https://doi.org/10.1038/s41559-017-0120
240 rdf:type schema:CreativeWork
241 sg:pub.10.1038/s41559-017-0121 schema:sameAs https://app.dimensions.ai/details/publication/pub.1084537825
242 https://doi.org/10.1038/s41559-017-0121
243 rdf:type schema:CreativeWork
244 sg:pub.10.1186/s12864-015-1648-4 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013757203
245 https://doi.org/10.1186/s12864-015-1648-4
246 rdf:type schema:CreativeWork
247 sg:pub.10.1186/s40851-015-0026-z schema:sameAs https://app.dimensions.ai/details/publication/pub.1035372962
248 https://doi.org/10.1186/s40851-015-0026-z
249 rdf:type schema:CreativeWork
250 sg:pub.10.4056/sigs.3136559 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010694525
251 https://doi.org/10.4056/sigs.3136559
252 rdf:type schema:CreativeWork
253 https://doi.org/10.1002/bies.201100001 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015883657
254 rdf:type schema:CreativeWork
255 https://doi.org/10.1002/bies.950100213 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049303658
256 rdf:type schema:CreativeWork
257 https://doi.org/10.1016/j.cell.2017.03.025 schema:sameAs https://app.dimensions.ai/details/publication/pub.1084524343
258 rdf:type schema:CreativeWork
259 https://doi.org/10.1016/j.cobeha.2017.06.008 schema:sameAs https://app.dimensions.ai/details/publication/pub.1090805461
260 rdf:type schema:CreativeWork
261 https://doi.org/10.1016/j.conb.2015.06.012 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006567275
262 rdf:type schema:CreativeWork
263 https://doi.org/10.1016/j.concog.2006.11.006 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023297673
264 rdf:type schema:CreativeWork
265 https://doi.org/10.1016/j.fsi.2015.05.004 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002620967
266 rdf:type schema:CreativeWork
267 https://doi.org/10.1016/j.fsi.2016.03.010 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043627030
268 rdf:type schema:CreativeWork
269 https://doi.org/10.1016/j.gene.2011.05.027 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028729105
270 rdf:type schema:CreativeWork
271 https://doi.org/10.1016/j.jembe.2013.02.010 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017617415
272 rdf:type schema:CreativeWork
273 https://doi.org/10.1016/j.pt.2006.02.008 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013748096
274 rdf:type schema:CreativeWork
275 https://doi.org/10.1016/j.tins.2009.05.008 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026805857
276 rdf:type schema:CreativeWork
277 https://doi.org/10.1016/s0022-2836(05)80360-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1013618994
278 rdf:type schema:CreativeWork
279 https://doi.org/10.1016/s0065-3454(08)60398-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003733590
280 rdf:type schema:CreativeWork
281 https://doi.org/10.1073/pnas.1817322116 schema:sameAs https://app.dimensions.ai/details/publication/pub.1111367362
282 rdf:type schema:CreativeWork
283 https://doi.org/10.1080/00222933.2013.825342 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020894682
284 rdf:type schema:CreativeWork
285 https://doi.org/10.1093/bioinformatics/btr011 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032486702
286 rdf:type schema:CreativeWork
287 https://doi.org/10.1093/bioinformatics/btt086 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000520351
288 rdf:type schema:CreativeWork
289 https://doi.org/10.1093/bioinformatics/btu023 schema:sameAs https://app.dimensions.ai/details/publication/pub.1034986720
290 rdf:type schema:CreativeWork
291 https://doi.org/10.1093/bioinformatics/btu170 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042720804
292 rdf:type schema:CreativeWork
293 https://doi.org/10.1093/gbe/evv050 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001688447
294 rdf:type schema:CreativeWork
295 https://doi.org/10.1093/gbe/evx032 schema:sameAs https://app.dimensions.ai/details/publication/pub.1083842464
296 rdf:type schema:CreativeWork
297 https://doi.org/10.1093/gigascience/gix059 schema:sameAs https://app.dimensions.ai/details/publication/pub.1090959675
298 rdf:type schema:CreativeWork
299 https://doi.org/10.1093/gigascience/gix120 schema:sameAs https://app.dimensions.ai/details/publication/pub.1099600518
300 rdf:type schema:CreativeWork
301 https://doi.org/10.1093/gigascience/gix128 schema:sameAs https://app.dimensions.ai/details/publication/pub.1099841369
302 rdf:type schema:CreativeWork
303 https://doi.org/10.1093/gigascience/giy119 schema:sameAs https://app.dimensions.ai/details/publication/pub.1107222538
304 rdf:type schema:CreativeWork
305 https://doi.org/10.1093/molbev/msx319 schema:sameAs https://app.dimensions.ai/details/publication/pub.1099877235
306 rdf:type schema:CreativeWork
307 https://doi.org/10.1093/nar/11.15.5159 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007243976
308 rdf:type schema:CreativeWork
309 https://doi.org/10.1093/nar/gkw294 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041063824
310 rdf:type schema:CreativeWork
311 https://doi.org/10.1098/rsif.2017.0889 schema:sameAs https://app.dimensions.ai/details/publication/pub.1103204676
312 rdf:type schema:CreativeWork
313 https://doi.org/10.1101/gr.089532.108 schema:sameAs https://app.dimensions.ai/details/publication/pub.1011404279
314 rdf:type schema:CreativeWork
315 https://doi.org/10.1101/gr.214346.116 schema:sameAs https://app.dimensions.ai/details/publication/pub.1083862088
316 rdf:type schema:CreativeWork
317 https://doi.org/10.1101/gr.229102 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022792016
318 rdf:type schema:CreativeWork
319 https://doi.org/10.1111/j.1095-8649.2000.tb00748.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1038895868
320 rdf:type schema:CreativeWork
321 https://doi.org/10.1111/j.1469-185x.1972.tb00975.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1024741905
322 rdf:type schema:CreativeWork
323 https://doi.org/10.1111/zsc.12207 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035474128
324 rdf:type schema:CreativeWork
325 https://doi.org/10.1126/science.1122033 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062453353
326 rdf:type schema:CreativeWork
327 https://doi.org/10.1126/science.1212795 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023644597
328 rdf:type schema:CreativeWork
329 https://doi.org/10.1152/physiol.00029.2012 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027889608
330 rdf:type schema:CreativeWork
331 https://doi.org/10.1177/0023677215580006 schema:sameAs https://app.dimensions.ai/details/publication/pub.1037390383
332 rdf:type schema:CreativeWork
333 https://doi.org/10.1371/journal.pone.0042546 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010562120
334 rdf:type schema:CreativeWork
335 https://doi.org/10.1371/journal.pone.0079516 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009897448
336 rdf:type schema:CreativeWork
337 https://doi.org/10.1371/journal.pone.0120732 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027485563
338 rdf:type schema:CreativeWork
339 https://doi.org/10.1371/journal.pone.0149496 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041604960
340 rdf:type schema:CreativeWork
341 https://doi.org/10.1371/journal.pone.0151561 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029308215
342 rdf:type schema:CreativeWork
343 https://doi.org/10.2307/1542389 schema:sameAs https://app.dimensions.ai/details/publication/pub.1069532554
344 rdf:type schema:CreativeWork
345 https://doi.org/10.3109/19401736.2014.919488 schema:sameAs https://app.dimensions.ai/details/publication/pub.1001266449
346 rdf:type schema:CreativeWork
347 https://doi.org/10.3389/fcell.2017.00053 schema:sameAs https://app.dimensions.ai/details/publication/pub.1085410815
348 rdf:type schema:CreativeWork
349 https://doi.org/10.3389/fcomm.2018.00020 schema:sameAs https://app.dimensions.ai/details/publication/pub.1104546650
350 rdf:type schema:CreativeWork
351 https://doi.org/10.3389/fevo.2014.00055 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046710080
352 rdf:type schema:CreativeWork
353 https://doi.org/10.3389/fphys.2018.00593 schema:sameAs https://app.dimensions.ai/details/publication/pub.1104151136
354 rdf:type schema:CreativeWork
355 https://doi.org/10.3389/fphys.2018.00700 schema:sameAs https://app.dimensions.ai/details/publication/pub.1104408705
356 rdf:type schema:CreativeWork
357 https://doi.org/10.3389/fphys.2018.00952 schema:sameAs https://app.dimensions.ai/details/publication/pub.1105710663
358 rdf:type schema:CreativeWork
359 https://doi.org/10.5479/si.00810282.513 schema:sameAs https://app.dimensions.ai/details/publication/pub.1072905639
360 rdf:type schema:CreativeWork
361 https://doi.org/10.7717/peerj.4331 schema:sameAs https://app.dimensions.ai/details/publication/pub.1101015919
362 rdf:type schema:CreativeWork
363 https://www.grid.ac/institutes/grid.1011.1 schema:alternateName James Cook University
364 schema:name Centre for Sustainable Tropical Fisheries and Aquaculture, Comparative Genomics Centre, College of Science and Engineering, James Cook University, Townsville, 4811, QLD, Australia.
365 Laboratory for Cytogenetics and Genome Research, Center for Human Genetics, KU Leuven, Leuven, Belgium.
366 Laboratory of Biodiversity and Evolutionary Genomics, KU Leuven, Leuven, Belgium.
367 rdf:type schema:Organization
368 https://www.grid.ac/institutes/grid.10420.37 schema:alternateName University of Vienna
369 schema:name Department of Molecular Evolution and Development, University of Vienna, Vienna, Austria.
370 Department of Molecular Evolution and Development, University of Vienna, Vienna, Austria. oleg.simakov@univie.ac.at.
371 rdf:type schema:Organization
372 https://www.grid.ac/institutes/grid.21155.32 schema:alternateName Beijing Genomics Institute
373 schema:name BGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.
374 rdf:type schema:Organization
375 https://www.grid.ac/institutes/grid.5596.f schema:alternateName KU Leuven
376 schema:name Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn Napoli, Napoli, Italy.
377 Genomics Core, KU Leuven, Leuven, Belgium.
378 Laboratory for Cytogenetics and Genome Research, Center for Human Genetics, KU Leuven, Leuven, Belgium.
379 Laboratory of Developmental Neurobiology, Department of Biology, KU Leuven, Leuven, Belgium.
380 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...