The emerging landscape of single-molecule protein sequencing technologies View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2021-06-07

AUTHORS

Javier Antonio Alfaro, Peggy Bohländer, Mingjie Dai, Mike Filius, Cecil J. Howard, Xander F. van Kooten, Shilo Ohayon, Adam Pomorski, Sonja Schmid, Aleksei Aksimentiev, Eric V. Anslyn, Georges Bedran, Chan Cao, Mauro Chinappi, Etienne Coyaud, Cees Dekker, Gunnar Dittmar, Nicholas Drachman, Rienk Eelkema, David Goodlett, Sébastien Hentz, Umesh Kalathiya, Neil L. Kelleher, Ryan T. Kelly, Zvi Kelman, Sung Hyun Kim, Bernhard Kuster, David Rodriguez-Larrea, Stuart Lindsay, Giovanni Maglia, Edward M. Marcotte, John P. Marino, Christophe Masselon, Michael Mayer, Patroklos Samaras, Kumar Sarthak, Lusia Sepiashvili, Derek Stein, Meni Wanunu, Mathias Wilhelm, Peng Yin, Amit Meller, Chirlmin Joo

ABSTRACT

Single-cell profiling methods have had a profound impact on the understanding of cellular heterogeneity. While genomes and transcriptomes can be explored at the single-cell level, single-cell profiling of proteomes is not yet established. Here we describe new single-molecule protein sequencing and identification technologies alongside innovations in mass spectrometry that will eventually enable broad sequence coverage in single-cell profiling. These technologies will in turn facilitate biological discovery and open new avenues for ultrasensitive disease diagnostics. More... »

PAGES

604-617

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  • Journal

    TITLE

    Nature Methods

    ISSUE

    6

    VOLUME

    18

    Author Affiliations

  • International Centre for Cancer Vaccine Science, University of Gdańsk, Gdańsk, Poland
  • Faculty of Applied Sciences, Delft University of Technology, Delft, the Netherlands
  • Department of Systems Biology, Harvard Medical School, Boston, MA, USA
  • Department of BioNanoScience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, the Netherlands
  • Department of Chemistry, University of Texas at Austin, Austin, TX, USA
  • Department of Biomedical Engineering, Technion–Israel Institute of Technology, Haifa, Israel
  • NanoDynamicsLab, Laboratory of Biophysics, Wageningen University, Wageningen, the Netherlands
  • Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL, USA
  • Institute of Bioengineering, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
  • Dipartimento di Ingegneria Industriale, Università di Roma Tor Vergata, Rome, Italy
  • Univ. Lille, Inserm, CHU Lille, U1192–Protéomique Réponse Inflammatoire Spectrométrie de Masse–PRISM, Lille, France
  • Department of Life Sciences and Medicine, University of Luxembourg, Esch-sur-Alzette, Luxembourg
  • Department of Physics, Brown University, Providence, RI, USA
  • Genome BC Proteomics Centre, University of Victoria, Victoria, British Columbia, Canada
  • Université Grenoble Alpes, CEA, LETI, Grenoble, France
  • Departments of Chemistry and Molecular Biosciences, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA
  • Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA
  • Biomolecular Labeling Laboratory, Institute for Bioscience and Biotechnology Research, Rockville, MD, USA
  • Bavarian Center for Biomolecular Mass Spectrometry, Freising, Germany
  • Department of Biochemistry and Molecular Biology, Biofisika Institute (CSIC, UPV/EHU), Leioa, Spain
  • Biodesign Institute, School of Molecular Sciences, Department of Physics, Arizona State University, Tempe, AZ, USA
  • Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, the Netherlands
  • Department of Molecular Biosciences, Center for Systems and Synthetic Biology, University of Texas at Austin, Austin, TX, USA
  • Institute for Bioscience and Biotechnology Research, National Institute of Standards and Technology, University of Maryland, Rockville, MD, USA
  • Université Grenoble Alpes, CEA, Inserm, BGE U1038, Grenoble, France
  • Adolphe Merkle Institute, University of Fribourg, Fribourg, Switzerland
  • Chair of Proteomics and Bioanalytics, Technische Universität München, Freising, Germany
  • University of Toronto, Hospital for Sick Children, Toronto, Ontario, Canada
  • Department of Chemistry and Chemical Biology, Northeastern University, Boston, MA, USA
  • Russell Berrie Nanotechnology Institute, Technion–Israel Institute of Technology, Haifa, Israel
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/s41592-021-01143-1

    DOI

    http://dx.doi.org/10.1038/s41592-021-01143-1

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1138653181

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/34099939


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