Genotypic variability enhances the reproducibility of an ecological study View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2018-02

AUTHORS

Alexandru Milcu, Ruben Puga-Freitas, Aaron M. Ellison, Manuel Blouin, Stefan Scheu, Grégoire T. Freschet, Laura Rose, Sebastien Barot, Simone Cesarz, Nico Eisenhauer, Thomas Girin, Davide Assandri, Michael Bonkowski, Nina Buchmann, Olaf Butenschoen, Sebastien Devidal, Gerd Gleixner, Arthur Gessler, Agnès Gigon, Anna Greiner, Carlo Grignani, Amandine Hansart, Zachary Kayler, Markus Lange, Jean-Christophe Lata, Jean-François Le Galliard, Martin Lukac, Neringa Mannerheim, Marina E. H. Müller, Anne Pando, Paula Rotter, Michael Scherer-Lorenzen, Rahme Seyhun, Katherine Urban-Mead, Alexandra Weigelt, Laura Zavattaro, Jacques Roy

ABSTRACT

Many scientific disciplines are currently experiencing a 'reproducibility crisis' because numerous scientific findings cannot be repeated consistently. A novel but controversial hypothesis postulates that stringent levels of environmental and biotic standardization in experimental studies reduce reproducibility by amplifying the impacts of laboratory-specific environmental factors not accounted for in study designs. A corollary to this hypothesis is that a deliberate introduction of controlled systematic variability (CSV) in experimental designs may lead to increased reproducibility. To test this hypothesis, we had 14 European laboratories run a simple microcosm experiment using grass (Brachypodium distachyon L.) monocultures and grass and legume (Medicago truncatula Gaertn.) mixtures. Each laboratory introduced environmental and genotypic CSV within and among replicated microcosms established in either growth chambers (with stringent control of environmental conditions) or glasshouses (with more variable environmental conditions). The introduction of genotypic CSV led to 18% lower among-laboratory variability in growth chambers, indicating increased reproducibility, but had no significant effect in glasshouses where reproducibility was generally lower. Environmental CSV had little effect on reproducibility. Although there are multiple causes for the 'reproducibility crisis', deliberately including genetic variability may be a simple solution for increasing the reproducibility of ecological studies performed under stringently controlled environmental conditions. More... »

PAGES

279-287

References to SciGraph publications

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/s41559-017-0434-x

DOI

http://dx.doi.org/10.1038/s41559-017-0434-x

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1100351843

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/29335575


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