Towards a unified open access dataset of molecular interactions View Full Text


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Article Info

DATE

2020-12-01

AUTHORS

Pablo Porras, Elisabet Barrera, Alan Bridge, Noemi del-Toro, Gianni Cesareni, Margaret Duesbury, Henning Hermjakob, Marta Iannuccelli, Igor Jurisica, Max Kotlyar, Luana Licata, Ruth C. Lovering, David J. Lynn, Birgit Meldal, Bindu Nanduri, Kalpana Paneerselvam, Simona Panni, Chiara Pastrello, Matteo Pellegrini, Livia Perfetto, Negin Rahimzadeh, Prashansa Ratan, Sylvie Ricard-Blum, Lukasz Salwinski, Gautam Shirodkar, Anjalia Shrivastava, Sandra Orchard

ABSTRACT

The International Molecular Exchange (IMEx) Consortium provides scientists with a single body of experimentally verified protein interactions curated in rich contextual detail to an internationally agreed standard. In this update to the work of the IMEx Consortium, we discuss how this initiative has been working in practice, how it has ensured database sustainability, and how it is meeting emerging annotation challenges through the introduction of new interactor types and data formats. Additionally, we provide examples of how IMEx data are being used by biomedical researchers and integrated in other bioinformatic tools and resources. More... »

PAGES

6144

References to SciGraph publications

  • 2008-12-07. An empirical framework for binary interactome mapping in NATURE METHODS
  • 2018-04-11. JAMI: a Java library for molecular interactions and data interoperability in BMC BIOINFORMATICS
  • 2007-08-08. The minimum information required for reporting a molecular interaction experiment (MIMIx) in NATURE BIOTECHNOLOGY
  • 2019-08-29. Maximizing binary interactome mapping with a minimal number of assays in NATURE COMMUNICATIONS
  • 2013-04-05. Alternative splicing and protein interaction data sets in NATURE BIOTECHNOLOGY
  • 2011-06-29. PSICQUIC and PSISCORE: accessing and scoring molecular interactions in NATURE METHODS
  • 2019-01-02. Capturing variation impact on molecular interactions in the IMEx Consortium mutations data set in NATURE COMMUNICATIONS
  • 2018-04-11. Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions in BMC BIOINFORMATICS
  • 2019-10-04. Informed Use of Protein–Protein Interaction Data: A Focus on the Integrated Interactions Database (IID) in PROTEIN-PROTEIN INTERACTION NETWORKS
  • 2004-09-15. Bioconductor: open software development for computational biology and bioinformatics in GENOME BIOLOGY
  • 2017-03-09. A global coalition to sustain core data in NATURE
  • 2016-03-15. The FAIR Guiding Principles for scientific data management and stewardship in SCIENTIFIC DATA
  • 2017-10-16. Protein interaction perturbation profiling at amino-acid resolution in NATURE METHODS
  • 2013-07-30. mentha: a resource for browsing integrated protein-interaction networks in NATURE METHODS
  • 2012-03-27. Protein interaction data curation: the International Molecular Exchange (IMEx) consortium in NATURE METHODS
  • 2002-05-08. Comparative assessment of large-scale data sets of protein–protein interactions in NATURE
  • 2007-10-09. Broadening the horizon – level 2.5 of the HUPO-PSI format for molecular interactions in BMC BIOLOGY
  • Journal

    TITLE

    Nature Communications

    ISSUE

    1

    VOLUME

    11

    Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/s41467-020-19942-z

    DOI

    http://dx.doi.org/10.1038/s41467-020-19942-z

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1132950406

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/33262342


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