Low genetic variation is associated with low mutation rate in the giant duckweed View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2019-12

AUTHORS

Shuqing Xu, Jessica Stapley, Saskia Gablenz, Justin Boyer, Klaus J. Appenroth, K. Sowjanya Sree, Jonathan Gershenzon, Alex Widmer, Meret Huber

ABSTRACT

Mutation rate and effective population size (Ne) jointly determine intraspecific genetic diversity, but the role of mutation rate is often ignored. Here we investigate genetic diversity, spontaneous mutation rate and Ne in the giant duckweed (Spirodela polyrhiza). Despite its large census population size, whole-genome sequencing of 68 globally sampled individuals reveals extremely low intraspecific genetic diversity. Assessed under natural conditions, the genome-wide spontaneous mutation rate is at least seven times lower than estimates made for other multicellular eukaryotes, whereas Ne is large. These results demonstrate that low genetic diversity can be associated with large-Ne species, where selection can reduce mutation rates to very low levels. This study also highlights that accurate estimates of mutation rate can help to explain seemingly unexpected patterns of genome-wide variation. More... »

PAGES

1243

References to SciGraph publications

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/s41467-019-09235-5

DOI

http://dx.doi.org/10.1038/s41467-019-09235-5

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1112854693

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/30886148


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