Metal–peptide rings form highly entangled topologically inequivalent frameworks with the same ring- and crossing-numbers View Full Text


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Article Info

DATE

2019-12

AUTHORS

Tomohisa Sawada, Ami Saito, Kenki Tamiya, Koya Shimokawa, Yutaro Hisada, Makoto Fujita

ABSTRACT

With increasing ring-crossing number (c), knot theory predicts an exponential increase in the number of topologically different links of these interlocking structures, even for structures with the same ring number (n) and c. Here, we report the selective construction of two topologies of 12-crossing peptide [4]catenanes (n = 4, c = 12) from metal ions and pyridine-appended tripeptide ligands. Two of the 100 possible topologies for this structure are selectively created from related ligands in which only the tripeptide sequence is changed: one catenane has a T2-tetrahedral link and the other a three-crossed tetrahedral link. Crystallographic studies illustrate that a conformational difference in only one of the three peptide residues in the ligand causes the change in the structure of the final tetrahedral link. Our results thus reveal that peptide-based folding and assembly can be used for the facile bottom-up construction of 3D molecular objects containing polyhedral links. More... »

PAGES

921

References to SciGraph publications

  • 2009-08. The architecture of Platonic polyhedral links in JOURNAL OF MATHEMATICAL CHEMISTRY
  • 2011-09. Gas-phase separation using a trapped ion mobility spectrometer in INTERNATIONAL JOURNAL FOR ION MOBILITY SPECTROMETRY
  • 2017-11-08. DNA nanotechnology in NATURE REVIEWS MATERIALS
  • 2014-10. Molecular design of DNA polyhedra based on genus in JOURNAL OF MATHEMATICAL CHEMISTRY
  • 2018-11. Stereoselective synthesis of a composite knot with nine crossings in NATURE CHEMISTRY
  • 2015-04. Two-stage directed self-assembly of a cyclic [3]catenane in NATURE CHEMISTRY
  • 2014-11. A Star of David catenane in NATURE CHEMISTRY
  • Journal

    TITLE

    Nature Communications

    ISSUE

    1

    VOLUME

    10

    From Grant

  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/s41467-019-08879-7

    DOI

    http://dx.doi.org/10.1038/s41467-019-08879-7

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1112308279

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/30796223


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