A region-resolved mucosa proteome of the human stomach View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2019-12

AUTHORS

Xiaotian Ni, Zhaoli Tan, Chen Ding, Chunchao Zhang, Lan Song, Shuai Yang, Mingwei Liu, Ru Jia, Chuanhua Zhao, Lei Song, Wanlin Liu, Quan Zhou, Tongqing Gong, Xianju Li, Yanhong Tai, Weimin Zhu, Tieliu Shi, Yi Wang, Jianming Xu, Bei Zhen, Jun Qin

ABSTRACT

The human gastric mucosa is the most active layer of the stomach wall, involved in food digestion, metabolic processes and gastric carcinogenesis. Anatomically, the human stomach is divided into seven regions, but the protein basis for cellular specialization is not well understood. Here we present a global analysis of protein profiles of 82 apparently normal mucosa samples obtained from living individuals by endoscopic stomach biopsy. We identify 6,258 high-confidence proteins and estimate the ranges of protein expression in the seven stomach regions, presenting a region-resolved proteome reference map of the near normal, human stomach. Furthermore, we measure mucosa protein profiles of tumor and tumor nearby tissues (TNT) from 58 gastric cancer patients, enabling comparisons between tumor, TNT, and normal tissue. These datasets provide a rich resource for the gastrointestinal tract research community to investigate the molecular basis for region-specific functions in mucosa physiology and pathology including gastric cancer. More... »

PAGES

39

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/s41467-018-07960-x

DOI

http://dx.doi.org/10.1038/s41467-018-07960-x

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1110955631

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/30604760


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