The role of water in sequence-independent ligand binding by an oligopeptide transporter protein View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1996-12

AUTHORS

Jeremy R.H. Tame, Sara H. Sleigh, Anthony J. Wilkinson, John E. Ladbury

ABSTRACT

Buried water molecules play a pivotal structural and energetic role in mediating interactions between a bacterial oligopeptide transporter protein and its ligands.

PAGES

998-1001

Journal

TITLE

Nature Structural & Molecular Biology

ISSUE

12

VOLUME

3

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/nsb1296-998

DOI

http://dx.doi.org/10.1038/nsb1296-998

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1015866245

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/8946852


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "author": [
      {
        "familyName": "Tame", 
        "givenName": "Jeremy R.H.", 
        "id": "sg:person.01074776770.43", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01074776770.43"
        ], 
        "type": "Person"
      }, 
      {
        "familyName": "Sleigh", 
        "givenName": "Sara H.", 
        "id": "sg:person.0720063207.12", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0720063207.12"
        ], 
        "type": "Person"
      }, 
      {
        "familyName": "Wilkinson", 
        "givenName": "Anthony J.", 
        "id": "sg:person.01135131247.31", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01135131247.31"
        ], 
        "type": "Person"
      }, 
      {
        "familyName": "Ladbury", 
        "givenName": "John E.", 
        "id": "sg:person.01366440262.32", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01366440262.32"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1016/0959-440x(91)90087-a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000167452"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0959-440x(91)90087-a", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000167452"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0003-2697(89)90213-3", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000330561"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/340404a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014349063", 
          "https://doi.org/10.1038/340404a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.91.3.1089", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027924295"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-349-12359-9_7", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035342974", 
          "https://doi.org/10.1007/978-1-349-12359-9_7"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/379219a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035631605", 
          "https://doi.org/10.1038/379219a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0959-440x(94)90062-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1036093874"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1074-5521(96)90063-0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1037769911"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.bi.55.070186.002145", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038156714"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1002/pro.5560041101", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038616223"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/jmbi.1994.1328", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038750991"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/1074-5521(95)90097-7", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040728673"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s0969-2126(01)00276-3", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052749696"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.91.5.1964", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052914955"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1021/bi00164a005", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1055163368"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/327730a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1056438797", 
          "https://doi.org/10.1038/327730a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/protein/7.2.149", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1059981007"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.264.5159.670", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062548081"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.8202710", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062653594"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.168.2.775-779.1986", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062715295"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1128/jb.169.8.3861-3865.1987", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062716243"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "1996-12", 
    "datePublishedReg": "1996-12-01", 
    "description": "Buried water molecules play a pivotal structural and energetic role in mediating interactions between a bacterial oligopeptide transporter protein and its ligands.", 
    "genre": "non_research_article", 
    "id": "sg:pub.10.1038/nsb1296-998", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1295033", 
        "issn": [
          "1545-9993", 
          "2331-365X"
        ], 
        "name": "Nature Structural & Molecular Biology", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "12", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "3"
      }
    ], 
    "name": "The role of water in sequence-independent ligand binding by an oligopeptide transporter protein", 
    "pagination": "998-1001", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "4b995e42dbd867fa70cf1475ee8887188a8354a8d026335f7dbe7e67d99c09cb"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "8946852"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "9421566"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1038/nsb1296-998"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1015866245"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1038/nsb1296-998", 
      "https://app.dimensions.ai/details/publication/pub.1015866245"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T19:46", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8681_00000435.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://www.nature.com/nsmb/journal/v3/n12/full/nsb1296-998.html"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/nsb1296-998'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/nsb1296-998'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/nsb1296-998'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/nsb1296-998'


 

This table displays all metadata directly associated to this object as RDF triples.

142 TRIPLES      20 PREDICATES      48 URIs      21 LITERALS      9 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1038/nsb1296-998 schema:author N35d14337ef3a4cf5b40448757224a498
2 schema:citation sg:pub.10.1007/978-1-349-12359-9_7
3 sg:pub.10.1038/327730a0
4 sg:pub.10.1038/340404a0
5 sg:pub.10.1038/379219a0
6 https://doi.org/10.1002/pro.5560041101
7 https://doi.org/10.1006/jmbi.1994.1328
8 https://doi.org/10.1016/0003-2697(89)90213-3
9 https://doi.org/10.1016/0959-440x(91)90087-a
10 https://doi.org/10.1016/1074-5521(95)90097-7
11 https://doi.org/10.1016/s0959-440x(94)90062-0
12 https://doi.org/10.1016/s0969-2126(01)00276-3
13 https://doi.org/10.1016/s1074-5521(96)90063-0
14 https://doi.org/10.1021/bi00164a005
15 https://doi.org/10.1073/pnas.91.3.1089
16 https://doi.org/10.1073/pnas.91.5.1964
17 https://doi.org/10.1093/protein/7.2.149
18 https://doi.org/10.1126/science.264.5159.670
19 https://doi.org/10.1126/science.8202710
20 https://doi.org/10.1128/jb.168.2.775-779.1986
21 https://doi.org/10.1128/jb.169.8.3861-3865.1987
22 https://doi.org/10.1146/annurev.bi.55.070186.002145
23 schema:datePublished 1996-12
24 schema:datePublishedReg 1996-12-01
25 schema:description Buried water molecules play a pivotal structural and energetic role in mediating interactions between a bacterial oligopeptide transporter protein and its ligands.
26 schema:genre non_research_article
27 schema:inLanguage en
28 schema:isAccessibleForFree false
29 schema:isPartOf Nb985553634fa4523b08da489b82f2cbb
30 Nc0da9a26ca574ad1a532070dcf29ffc6
31 sg:journal.1295033
32 schema:name The role of water in sequence-independent ligand binding by an oligopeptide transporter protein
33 schema:pagination 998-1001
34 schema:productId N3ca1e2cd845b4bd4bf2f79a70888e008
35 N431fb5f763be4f4da3022bf0589d1ce1
36 N891a4b289a7f43f5b118b04c583d8b54
37 Nac51ac65bd564bebb234e3df2560e9e4
38 Nbcff7d53ef314df084542c244ca86c63
39 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015866245
40 https://doi.org/10.1038/nsb1296-998
41 schema:sdDatePublished 2019-04-10T19:46
42 schema:sdLicense https://scigraph.springernature.com/explorer/license/
43 schema:sdPublisher Ne4b903986f8740568af042c56291d94c
44 schema:url http://www.nature.com/nsmb/journal/v3/n12/full/nsb1296-998.html
45 sgo:license sg:explorer/license/
46 sgo:sdDataset articles
47 rdf:type schema:ScholarlyArticle
48 N35d14337ef3a4cf5b40448757224a498 rdf:first sg:person.01074776770.43
49 rdf:rest N8d2dbe9c73cf41bb83c90e4ebafb4872
50 N3ca1e2cd845b4bd4bf2f79a70888e008 schema:name readcube_id
51 schema:value 4b995e42dbd867fa70cf1475ee8887188a8354a8d026335f7dbe7e67d99c09cb
52 rdf:type schema:PropertyValue
53 N431fb5f763be4f4da3022bf0589d1ce1 schema:name pubmed_id
54 schema:value 8946852
55 rdf:type schema:PropertyValue
56 N444fb6f5176442b88ec3e07b94becc90 rdf:first sg:person.01135131247.31
57 rdf:rest N7e0b17361eaf4c4d8a909afa2402aab7
58 N7e0b17361eaf4c4d8a909afa2402aab7 rdf:first sg:person.01366440262.32
59 rdf:rest rdf:nil
60 N891a4b289a7f43f5b118b04c583d8b54 schema:name nlm_unique_id
61 schema:value 9421566
62 rdf:type schema:PropertyValue
63 N8d2dbe9c73cf41bb83c90e4ebafb4872 rdf:first sg:person.0720063207.12
64 rdf:rest N444fb6f5176442b88ec3e07b94becc90
65 Nac51ac65bd564bebb234e3df2560e9e4 schema:name doi
66 schema:value 10.1038/nsb1296-998
67 rdf:type schema:PropertyValue
68 Nb985553634fa4523b08da489b82f2cbb schema:issueNumber 12
69 rdf:type schema:PublicationIssue
70 Nbcff7d53ef314df084542c244ca86c63 schema:name dimensions_id
71 schema:value pub.1015866245
72 rdf:type schema:PropertyValue
73 Nc0da9a26ca574ad1a532070dcf29ffc6 schema:volumeNumber 3
74 rdf:type schema:PublicationVolume
75 Ne4b903986f8740568af042c56291d94c schema:name Springer Nature - SN SciGraph project
76 rdf:type schema:Organization
77 sg:journal.1295033 schema:issn 1545-9993
78 2331-365X
79 schema:name Nature Structural & Molecular Biology
80 rdf:type schema:Periodical
81 sg:person.01074776770.43 schema:familyName Tame
82 schema:givenName Jeremy R.H.
83 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01074776770.43
84 rdf:type schema:Person
85 sg:person.01135131247.31 schema:familyName Wilkinson
86 schema:givenName Anthony J.
87 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01135131247.31
88 rdf:type schema:Person
89 sg:person.01366440262.32 schema:familyName Ladbury
90 schema:givenName John E.
91 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01366440262.32
92 rdf:type schema:Person
93 sg:person.0720063207.12 schema:familyName Sleigh
94 schema:givenName Sara H.
95 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0720063207.12
96 rdf:type schema:Person
97 sg:pub.10.1007/978-1-349-12359-9_7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035342974
98 https://doi.org/10.1007/978-1-349-12359-9_7
99 rdf:type schema:CreativeWork
100 sg:pub.10.1038/327730a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1056438797
101 https://doi.org/10.1038/327730a0
102 rdf:type schema:CreativeWork
103 sg:pub.10.1038/340404a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014349063
104 https://doi.org/10.1038/340404a0
105 rdf:type schema:CreativeWork
106 sg:pub.10.1038/379219a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035631605
107 https://doi.org/10.1038/379219a0
108 rdf:type schema:CreativeWork
109 https://doi.org/10.1002/pro.5560041101 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038616223
110 rdf:type schema:CreativeWork
111 https://doi.org/10.1006/jmbi.1994.1328 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038750991
112 rdf:type schema:CreativeWork
113 https://doi.org/10.1016/0003-2697(89)90213-3 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000330561
114 rdf:type schema:CreativeWork
115 https://doi.org/10.1016/0959-440x(91)90087-a schema:sameAs https://app.dimensions.ai/details/publication/pub.1000167452
116 rdf:type schema:CreativeWork
117 https://doi.org/10.1016/1074-5521(95)90097-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040728673
118 rdf:type schema:CreativeWork
119 https://doi.org/10.1016/s0959-440x(94)90062-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036093874
120 rdf:type schema:CreativeWork
121 https://doi.org/10.1016/s0969-2126(01)00276-3 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052749696
122 rdf:type schema:CreativeWork
123 https://doi.org/10.1016/s1074-5521(96)90063-0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1037769911
124 rdf:type schema:CreativeWork
125 https://doi.org/10.1021/bi00164a005 schema:sameAs https://app.dimensions.ai/details/publication/pub.1055163368
126 rdf:type schema:CreativeWork
127 https://doi.org/10.1073/pnas.91.3.1089 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027924295
128 rdf:type schema:CreativeWork
129 https://doi.org/10.1073/pnas.91.5.1964 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052914955
130 rdf:type schema:CreativeWork
131 https://doi.org/10.1093/protein/7.2.149 schema:sameAs https://app.dimensions.ai/details/publication/pub.1059981007
132 rdf:type schema:CreativeWork
133 https://doi.org/10.1126/science.264.5159.670 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062548081
134 rdf:type schema:CreativeWork
135 https://doi.org/10.1126/science.8202710 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062653594
136 rdf:type schema:CreativeWork
137 https://doi.org/10.1128/jb.168.2.775-779.1986 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062715295
138 rdf:type schema:CreativeWork
139 https://doi.org/10.1128/jb.169.8.3861-3865.1987 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062716243
140 rdf:type schema:CreativeWork
141 https://doi.org/10.1146/annurev.bi.55.070186.002145 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038156714
142 rdf:type schema:CreativeWork
 




Preview window. Press ESC to close (or click here)


...