Categorization of the gut microbiota: enterotypes or gradients? View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2012-09

AUTHORS

Ian B. Jeffery, Marcus J. Claesson, Paul W. O'Toole, Fergus Shanahan

ABSTRACT

Grouping the microbiota of individual subjects into compositional categories, or enterotypes, based on the dominance of certain genera may have oversimplified a complex situation.

PAGES

591

Journal

TITLE

Nature Reviews Microbiology

ISSUE

9

VOLUME

10

Author Affiliations

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/nrmicro2859

DOI

http://dx.doi.org/10.1038/nrmicro2859

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1040698921

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/23066529


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "author": [
      {
        "affiliation": {
          "alternateName": "University College Cork", 
          "id": "https://www.grid.ac/institutes/grid.7872.a", 
          "name": [
            "Ian B. Jeffery, Marcus J. Claesson and Paul W. O'Toole are at the Department of Microbiology and the Alimentary Pharmabiotic Centre, University College Cork, Western Road, Cork, Ireland."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Jeffery", 
        "givenName": "Ian B.", 
        "id": "sg:person.0750017374.55", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0750017374.55"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University College Cork", 
          "id": "https://www.grid.ac/institutes/grid.7872.a", 
          "name": [
            "Ian B. Jeffery, Marcus J. Claesson and Paul W. O'Toole are at the Department of Microbiology and the Alimentary Pharmabiotic Centre, University College Cork, Western Road, Cork, Ireland."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Claesson", 
        "givenName": "Marcus J.", 
        "id": "sg:person.0662521542.21", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0662521542.21"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University College Cork", 
          "id": "https://www.grid.ac/institutes/grid.7872.a", 
          "name": [
            "Ian B. Jeffery, Marcus J. Claesson and Paul W. O'Toole are at the Department of Microbiology and the Alimentary Pharmabiotic Centre, University College Cork, Western Road, Cork, Ireland."
          ], 
          "type": "Organization"
        }, 
        "familyName": "O'Toole", 
        "givenName": "Paul W.", 
        "id": "sg:person.01305242542.02", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01305242542.02"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University College Cork", 
          "id": "https://www.grid.ac/institutes/grid.7872.a", 
          "name": [
            "Fergus Shanahan is at the Alimentary Pharmabiotic Centre and the Department of Medicine, University College Cork, Western Road, Cork, Ireland."
          ], 
          "type": "Organization"
        }, 
        "familyName": "Shanahan", 
        "givenName": "Fergus", 
        "id": "sg:person.01066033305.81", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01066033305.81"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1038/nature11234", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007740093", 
          "https://doi.org/10.1038/nature11234"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1751-7915.2011.00290.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1011624172"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1208344", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015324311"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1005963107", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023427228"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.1000097107", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024137469"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature09944", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026204536", 
          "https://doi.org/10.1038/nature09944"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pcbi.1002606", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027241429"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature11319", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032682406", 
          "https://doi.org/10.1038/nature11319"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.idairyj.2009.11.010", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038814002"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0034242", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043142381"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1080857", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045994579"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/ismej.2010.118", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046790587", 
          "https://doi.org/10.1038/ismej.2010.118"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1198719", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049041229"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature.2012.10276", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1056445862", 
          "https://doi.org/10.1038/nature.2012.10276"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2012-09", 
    "datePublishedReg": "2012-09-01", 
    "description": "Grouping the microbiota of individual subjects into compositional categories, or enterotypes, based on the dominance of certain genera may have oversimplified a complex situation.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1038/nrmicro2859", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1032854", 
        "issn": [
          "1740-1526", 
          "1740-1534"
        ], 
        "name": "Nature Reviews Microbiology", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "9", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "10"
      }
    ], 
    "name": "Categorization of the gut microbiota: enterotypes or gradients?", 
    "pagination": "591", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "c1df67cd7e1fcd62e8e52b3e8466dd4a25c41c070fc98f71c0b7b0921b0e2c6b"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "23066529"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "101190261"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1038/nrmicro2859"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1040698921"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1038/nrmicro2859", 
      "https://app.dimensions.ai/details/publication/pub.1040698921"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T15:40", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8664_00000435.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://www.nature.com/articles/nrmicro2859"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/nrmicro2859'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/nrmicro2859'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/nrmicro2859'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/nrmicro2859'


 

This table displays all metadata directly associated to this object as RDF triples.

130 TRIPLES      20 PREDICATES      41 URIs      21 LITERALS      9 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1038/nrmicro2859 schema:author N1854d5768df742fe860405f8274368ab
2 schema:citation sg:pub.10.1038/ismej.2010.118
3 sg:pub.10.1038/nature.2012.10276
4 sg:pub.10.1038/nature09944
5 sg:pub.10.1038/nature11234
6 sg:pub.10.1038/nature11319
7 https://doi.org/10.1016/j.idairyj.2009.11.010
8 https://doi.org/10.1073/pnas.1000097107
9 https://doi.org/10.1073/pnas.1005963107
10 https://doi.org/10.1111/j.1751-7915.2011.00290.x
11 https://doi.org/10.1126/science.1080857
12 https://doi.org/10.1126/science.1198719
13 https://doi.org/10.1126/science.1208344
14 https://doi.org/10.1371/journal.pcbi.1002606
15 https://doi.org/10.1371/journal.pone.0034242
16 schema:datePublished 2012-09
17 schema:datePublishedReg 2012-09-01
18 schema:description Grouping the microbiota of individual subjects into compositional categories, or enterotypes, based on the dominance of certain genera may have oversimplified a complex situation.
19 schema:genre research_article
20 schema:inLanguage en
21 schema:isAccessibleForFree false
22 schema:isPartOf N4b1ac32d2d1d403580260792b0052ea5
23 Na819f1bcb01e4c22ba4b8803b542c06b
24 sg:journal.1032854
25 schema:name Categorization of the gut microbiota: enterotypes or gradients?
26 schema:pagination 591
27 schema:productId N1dd932457a324f1795ef3442b0161ea8
28 N2b4003456734413d8489da5909b69713
29 N4bceea11a26f403bbda5c84a10b56d7c
30 N7413785008034310940fc2f29dc4a4e9
31 N88e0eead13e14cc79cf47fabe8650a46
32 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040698921
33 https://doi.org/10.1038/nrmicro2859
34 schema:sdDatePublished 2019-04-10T15:40
35 schema:sdLicense https://scigraph.springernature.com/explorer/license/
36 schema:sdPublisher N85c3fd5fbea94b7e9100f9c5549af4eb
37 schema:url https://www.nature.com/articles/nrmicro2859
38 sgo:license sg:explorer/license/
39 sgo:sdDataset articles
40 rdf:type schema:ScholarlyArticle
41 N1854d5768df742fe860405f8274368ab rdf:first sg:person.0750017374.55
42 rdf:rest N6ca3ca8ad730406b80f821b26204fa2a
43 N1dd932457a324f1795ef3442b0161ea8 schema:name readcube_id
44 schema:value c1df67cd7e1fcd62e8e52b3e8466dd4a25c41c070fc98f71c0b7b0921b0e2c6b
45 rdf:type schema:PropertyValue
46 N2b4003456734413d8489da5909b69713 schema:name doi
47 schema:value 10.1038/nrmicro2859
48 rdf:type schema:PropertyValue
49 N4b1ac32d2d1d403580260792b0052ea5 schema:volumeNumber 10
50 rdf:type schema:PublicationVolume
51 N4bceea11a26f403bbda5c84a10b56d7c schema:name pubmed_id
52 schema:value 23066529
53 rdf:type schema:PropertyValue
54 N6c787d59df1a4d629c4555dc55de8df1 rdf:first sg:person.01066033305.81
55 rdf:rest rdf:nil
56 N6ca3ca8ad730406b80f821b26204fa2a rdf:first sg:person.0662521542.21
57 rdf:rest Neab39d64681b4f1d90c13f24102fe0e4
58 N7413785008034310940fc2f29dc4a4e9 schema:name dimensions_id
59 schema:value pub.1040698921
60 rdf:type schema:PropertyValue
61 N85c3fd5fbea94b7e9100f9c5549af4eb schema:name Springer Nature - SN SciGraph project
62 rdf:type schema:Organization
63 N88e0eead13e14cc79cf47fabe8650a46 schema:name nlm_unique_id
64 schema:value 101190261
65 rdf:type schema:PropertyValue
66 Na819f1bcb01e4c22ba4b8803b542c06b schema:issueNumber 9
67 rdf:type schema:PublicationIssue
68 Neab39d64681b4f1d90c13f24102fe0e4 rdf:first sg:person.01305242542.02
69 rdf:rest N6c787d59df1a4d629c4555dc55de8df1
70 sg:journal.1032854 schema:issn 1740-1526
71 1740-1534
72 schema:name Nature Reviews Microbiology
73 rdf:type schema:Periodical
74 sg:person.01066033305.81 schema:affiliation https://www.grid.ac/institutes/grid.7872.a
75 schema:familyName Shanahan
76 schema:givenName Fergus
77 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01066033305.81
78 rdf:type schema:Person
79 sg:person.01305242542.02 schema:affiliation https://www.grid.ac/institutes/grid.7872.a
80 schema:familyName O'Toole
81 schema:givenName Paul W.
82 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01305242542.02
83 rdf:type schema:Person
84 sg:person.0662521542.21 schema:affiliation https://www.grid.ac/institutes/grid.7872.a
85 schema:familyName Claesson
86 schema:givenName Marcus J.
87 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0662521542.21
88 rdf:type schema:Person
89 sg:person.0750017374.55 schema:affiliation https://www.grid.ac/institutes/grid.7872.a
90 schema:familyName Jeffery
91 schema:givenName Ian B.
92 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0750017374.55
93 rdf:type schema:Person
94 sg:pub.10.1038/ismej.2010.118 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046790587
95 https://doi.org/10.1038/ismej.2010.118
96 rdf:type schema:CreativeWork
97 sg:pub.10.1038/nature.2012.10276 schema:sameAs https://app.dimensions.ai/details/publication/pub.1056445862
98 https://doi.org/10.1038/nature.2012.10276
99 rdf:type schema:CreativeWork
100 sg:pub.10.1038/nature09944 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026204536
101 https://doi.org/10.1038/nature09944
102 rdf:type schema:CreativeWork
103 sg:pub.10.1038/nature11234 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007740093
104 https://doi.org/10.1038/nature11234
105 rdf:type schema:CreativeWork
106 sg:pub.10.1038/nature11319 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032682406
107 https://doi.org/10.1038/nature11319
108 rdf:type schema:CreativeWork
109 https://doi.org/10.1016/j.idairyj.2009.11.010 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038814002
110 rdf:type schema:CreativeWork
111 https://doi.org/10.1073/pnas.1000097107 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024137469
112 rdf:type schema:CreativeWork
113 https://doi.org/10.1073/pnas.1005963107 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023427228
114 rdf:type schema:CreativeWork
115 https://doi.org/10.1111/j.1751-7915.2011.00290.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1011624172
116 rdf:type schema:CreativeWork
117 https://doi.org/10.1126/science.1080857 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045994579
118 rdf:type schema:CreativeWork
119 https://doi.org/10.1126/science.1198719 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049041229
120 rdf:type schema:CreativeWork
121 https://doi.org/10.1126/science.1208344 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015324311
122 rdf:type schema:CreativeWork
123 https://doi.org/10.1371/journal.pcbi.1002606 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027241429
124 rdf:type schema:CreativeWork
125 https://doi.org/10.1371/journal.pone.0034242 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043142381
126 rdf:type schema:CreativeWork
127 https://www.grid.ac/institutes/grid.7872.a schema:alternateName University College Cork
128 schema:name Fergus Shanahan is at the Alimentary Pharmabiotic Centre and the Department of Medicine, University College Cork, Western Road, Cork, Ireland.
129 Ian B. Jeffery, Marcus J. Claesson and Paul W. O'Toole are at the Department of Microbiology and the Alimentary Pharmabiotic Centre, University College Cork, Western Road, Cork, Ireland.
130 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...