A unified classification system for eukaryotic transposable elements View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2007-12

AUTHORS

Thomas Wicker, François Sabot, Aurélie Hua-Van, Jeffrey L. Bennetzen, Pierre Capy, Boulos Chalhoub, Andrew Flavell, Philippe Leroy, Michele Morgante, Olivier Panaud, Etienne Paux, Phillip SanMiguel, Alan H. Schulman

ABSTRACT

Transposable elements are diverse and abundantly present in eukaryotic genomes. To help with the challenge of their identification and annotation, these authors propose the first unified hierarchical classification system for transposable elements. The system and nomenclature are kept up to date in a related database — WikiPoson.

PAGES

973-982

References to SciGraph publications

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  • Journal

    TITLE

    Nature Reviews Genetics

    ISSUE

    12

    VOLUME

    8

    Author Affiliations

  • Thomas Wicker is at the Institute of Plant Biology, University Zurich, Zollikerstrasse 107, CH-8008 Zurich, Switzerland.
  • François Sabot and Alan H. Schulman are at MTT/BI Plant Genomics Laboratory, Institute of Biotechnology, Viikki Biocenter, University of Helsinki, P.O. BOX 56, FIN-00014 Helsinki, Finland.
  • Aurélie Hua-Van and Pierre Capy are at Laboratoire Evolution, Génomes et Spéciation, UPR 9034, CNRS 91198 Gif-sur Yvette Cedex, France and Université Paris-Sud 11, 91405 Orsay Cedex, France.
  • Jeffrey L. Bennetzen is at the Department of Genetics, University of Georgia, Athens, Georgia, 30602-7223, USA.
  • Boulos Chalhoub is at Unité de Recherche en Génomique Végétale (URGV/URGI), Organization and Evolution of Plant Genomes, 2 rue Gaston Crémieux CP 5708, FR-91057 Evry Cedex, France.
  • Andrew Flavell is at the Plant Research Unit, University of Dundee at SCRI, DD2 5DA Invergowrie, Dundee, United Kingdom.
  • Philippe Leroy amd Etienne Paux are at INRA-Université Blaise-Pascal, UMR 1095, 234 avenue du Brézet, FR-63100 Clermont-Ferrand Cedex, France.
  • Michele Morgante is at Dipartimento di Scienze Agrarie ed Ambientali, Università di Udine, Via delle Scienze 208, I-33100 Udine, Italy.
  • Olivier Panaud is at Laboratoire Génome et Développement des Plantes, UMR 5096 CNRS-IRD-Université de Perpignan, 52 Avenue Paul Alduy, F-66860 Perpignan, France.
  • Phillip SanMiguel is at Purdue Genomics Core Facility, 170 South University Street, West Lafayette, IN, 47907-2072, USA.
  • Alan H. Schulman is also at Plant Genomics, Food and Biotechnology, MTT Agrifood Research Finland, Myllytie 10, FIN-31600 Jokioinen, Finland.
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/nrg2165

    DOI

    http://dx.doi.org/10.1038/nrg2165

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1053647019

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/17984973


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    289 grid-institutes:grid.5390.f schema:alternateName Michele Morgante is at Dipartimento di Scienze Agrarie ed Ambientali, Università di Udine, Via delle Scienze 208, I-33100 Udine, Italy.
    290 schema:name Michele Morgante is at Dipartimento di Scienze Agrarie ed Ambientali, Università di Udine, Via delle Scienze 208, I-33100 Udine, Italy.
    291 rdf:type schema:Organization
    292 grid-institutes:grid.5842.b schema:alternateName Aurélie Hua-Van and Pierre Capy are at Laboratoire Evolution, Génomes et Spéciation, UPR 9034, CNRS 91198 Gif-sur Yvette Cedex, France and Université Paris-Sud 11, 91405 Orsay Cedex, France.
    293 schema:name Aurélie Hua-Van and Pierre Capy are at Laboratoire Evolution, Génomes et Spéciation, UPR 9034, CNRS 91198 Gif-sur Yvette Cedex, France and Université Paris-Sud 11, 91405 Orsay Cedex, France.
    294 rdf:type schema:Organization
    295 grid-institutes:grid.7400.3 schema:alternateName Thomas Wicker is at the Institute of Plant Biology, University Zurich, Zollikerstrasse 107, CH-8008 Zurich, Switzerland.
    296 schema:name Thomas Wicker is at the Institute of Plant Biology, University Zurich, Zollikerstrasse 107, CH-8008 Zurich, Switzerland.
    297 rdf:type schema:Organization
    298 grid-institutes:grid.7737.4 schema:alternateName François Sabot and Alan H. Schulman are at MTT/BI Plant Genomics Laboratory, Institute of Biotechnology, Viikki Biocenter, University of Helsinki, P.O. BOX 56, FIN-00014 Helsinki, Finland.
    299 schema:name François Sabot and Alan H. Schulman are at MTT/BI Plant Genomics Laboratory, Institute of Biotechnology, Viikki Biocenter, University of Helsinki, P.O. BOX 56, FIN-00014 Helsinki, Finland.
    300 rdf:type schema:Organization
    301 grid-institutes:grid.8241.f schema:alternateName Andrew Flavell is at the Plant Research Unit, University of Dundee at SCRI, DD2 5DA Invergowrie, Dundee, United Kingdom.
    302 schema:name Andrew Flavell is at the Plant Research Unit, University of Dundee at SCRI, DD2 5DA Invergowrie, Dundee, United Kingdom.
    303 rdf:type schema:Organization
     




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