QIIME allows analysis of high-throughput community sequencing data View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Journal

TITLE

Nature Methods

ISSUE

5

VOLUME

7

Related Patents

  • Treatment Of Cancer By Manipulation Of Commensal Microflora
  • Compositions And Methods For Identifying And Comparing Members Of Microbial Communities By Computational Analysis Of Amplicon Sequences
  • Activated Lactobacillus Reuteri Strains For Selective Pathogen Inhibition In A Human Microbial Community
  • Metagenomic Method For In Vitro Diagnosis Of Gut Dysbiosis
  • Microbiome-Based Diagnosis, Prediction And Treatment Of Relapsing Obesity
  • Methods And Pharmaceutical Compositions For Preventing Or Treating Imflammatory Bowel Diseases
  • Methods For Controlling Souring In Engineered Systems
  • Methods And Materials For Treating Endometrial Cancer
  • Microbiome Response To Agents
  • Methods Of Improving Animal Performance
  • Use Of Collinsella For Treatment Of Inflammatory Bowel Disease
  • Methods Of Treating Diseases Associated With Ilc3 Cells
  • Nutritional Compositions With 2fl And Lnnt For Use In Preventing And/Or Treating Non-Rotavirus Diarrhea By Acting On The Gut Microbiota Dysbiosis
  • Nutritional Compositions For Infants And/Or Young Children Comprising Oligosaccharides
  • Methods Of Treating Liver Toxicity And Disorders
  • Nutritional Compositions And Infant Formulas Comprising A Mix Of Oligosaccharides And Optionally Bifidobacterium Lactis For Preventing, Treating Or Reducing The Severity Of Non-Rotavirus-Associated Diarrhoea
  • Microbiota Composition, As A Marker Of Responsiveness To Chemotherapy, And Use Of Microbial Modulators (Pre-, Pro- Or Synbiotics) For Improving The Efficacy Of A Cancer Treatment
  • Probiotic Compositions Containing Clostridials For Inhibiting Inflammation
  • Compositions And Methods For Identifying And Comparing Members Of Microbial Communities By Computational Analysis Of Amplicon Sequences
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/nmeth.f.303

    DOI

    http://dx.doi.org/10.1038/nmeth.f.303

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1009032055

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/20383131


    Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
    Incoming Citations Browse incoming citations for this publication using opencitations.net

    JSON-LD is the canonical representation for SciGraph data.

    TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

    [
      {
        "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
        "author": [
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Caporaso", 
            "givenName": "J Gregory", 
            "id": "sg:person.0624224157.70", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0624224157.70"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Kuczynski", 
            "givenName": "Justin", 
            "id": "sg:person.01242576526.02", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01242576526.02"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Stombaugh", 
            "givenName": "Jesse", 
            "id": "sg:person.01256275777.26", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01256275777.26"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Pennsylvania", 
              "id": "https://www.grid.ac/institutes/grid.25879.31", 
              "name": [
                "Department of Microbiology, University of Pennsylvania, Philadelphia, Pennsylvania, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Bittinger", 
            "givenName": "Kyle", 
            "id": "sg:person.01244225361.13", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01244225361.13"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Pennsylvania", 
              "id": "https://www.grid.ac/institutes/grid.25879.31", 
              "name": [
                "Department of Microbiology, University of Pennsylvania, Philadelphia, Pennsylvania, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Bushman", 
            "givenName": "Frederic D", 
            "id": "sg:person.01216060406.79", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01216060406.79"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Costello", 
            "givenName": "Elizabeth K", 
            "id": "sg:person.0611560436.51", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0611560436.51"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Cooperative Institute for Research in Environmental Sciences and Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Fierer", 
            "givenName": "Noah", 
            "id": "sg:person.01061615031.38", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01061615031.38"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Computer Science, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Pe\u00f1a", 
            "givenName": "Antonio Gonzalez", 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Computer Science, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Goodrich", 
            "givenName": "Julia K", 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Washington University in St. Louis", 
              "id": "https://www.grid.ac/institutes/grid.4367.6", 
              "name": [
                "Center for Genome Sciences, Washington University School of Medicine, St. Louis, Missouri, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Gordon", 
            "givenName": "Jeffrey I", 
            "id": "sg:person.013751061307.10", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013751061307.10"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Australian National University", 
              "id": "https://www.grid.ac/institutes/grid.1001.0", 
              "name": [
                "Computational Genomics Laboratory, John Curtin School of Medical Research, The Australian National University, Canberra, Australian Capital Territory, Australia."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Huttley", 
            "givenName": "Gavin A", 
            "id": "sg:person.01247001327.73", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01247001327.73"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "San Diego State University", 
              "id": "https://www.grid.ac/institutes/grid.263081.e", 
              "name": [
                "Department of Biology, San Diego State University, San Diego, California, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Kelley", 
            "givenName": "Scott T", 
            "id": "sg:person.0616435110.50", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0616435110.50"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Computer Science, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Knights", 
            "givenName": "Dan", 
            "id": "sg:person.01054701157.41", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01054701157.41"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Cornell University", 
              "id": "https://www.grid.ac/institutes/grid.5386.8", 
              "name": [
                "Department of Microbiology, Cornell University, Ithaca, New York, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Koenig", 
            "givenName": "Jeremy E", 
            "id": "sg:person.01044776611.46", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01044776611.46"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Cornell University", 
              "id": "https://www.grid.ac/institutes/grid.5386.8", 
              "name": [
                "Department of Microbiology, Cornell University, Ithaca, New York, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Ley", 
            "givenName": "Ruth E", 
            "id": "sg:person.0725775131.01", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0725775131.01"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Lozupone", 
            "givenName": "Catherine A", 
            "id": "sg:person.0672337357.81", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0672337357.81"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "McDonald", 
            "givenName": "Daniel", 
            "id": "sg:person.01324411177.44", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01324411177.44"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Washington University in St. Louis", 
              "id": "https://www.grid.ac/institutes/grid.4367.6", 
              "name": [
                "Center for Genome Sciences, Washington University School of Medicine, St. Louis, Missouri, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Muegge", 
            "givenName": "Brian D", 
            "id": "sg:person.01260403722.50", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01260403722.50"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Pirrung", 
            "givenName": "Meg", 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Reeder", 
            "givenName": "Jens", 
            "id": "sg:person.0714463230.04", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0714463230.04"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "name": [
                "Luca Technologies, Golden, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Sevinsky", 
            "givenName": "Joel R", 
            "id": "sg:person.01140603373.08", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01140603373.08"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Washington University in St. Louis", 
              "id": "https://www.grid.ac/institutes/grid.4367.6", 
              "name": [
                "Center for Genome Sciences, Washington University School of Medicine, St. Louis, Missouri, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Turnbaugh", 
            "givenName": "Peter J", 
            "id": "sg:person.01065252767.89", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01065252767.89"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Walters", 
            "givenName": "William A", 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Widmann", 
            "givenName": "Jeremy", 
            "id": "sg:person.01210162577.60", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01210162577.60"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Washington University in St. Louis", 
              "id": "https://www.grid.ac/institutes/grid.4367.6", 
              "name": [
                "Center for Genome Sciences, Washington University School of Medicine, St. Louis, Missouri, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Yatsunenko", 
            "givenName": "Tanya", 
            "id": "sg:person.01161425357.49", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01161425357.49"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "University of Colorado Boulder", 
              "id": "https://www.grid.ac/institutes/grid.266190.a", 
              "name": [
                "Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Zaneveld", 
            "givenName": "Jesse", 
            "id": "sg:person.0753705541.65", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0753705541.65"
            ], 
            "type": "Person"
          }, 
          {
            "affiliation": {
              "alternateName": "Howard Hughes Medical Institute", 
              "id": "https://www.grid.ac/institutes/grid.413575.1", 
              "name": [
                "Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA.", 
                "Howard Hughes Medical Institute, Boulder, Colorado, USA."
              ], 
              "type": "Organization"
            }, 
            "familyName": "Knight", 
            "givenName": "Rob", 
            "id": "sg:person.016311745377.96", 
            "sameAs": [
              "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016311745377.96"
            ], 
            "type": "Person"
          }
        ], 
        "citation": [
          {
            "id": "https://doi.org/10.1101/gr.096651.109", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1034877175"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1186/gb-2007-8-8-r171", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1036049247", 
              "https://doi.org/10.1186/gb-2007-8-8-r171"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1128/aem.01541-09", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1038354310"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/444420a", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1041912982", 
              "https://doi.org/10.1038/444420a"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/444420a", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1041912982", 
              "https://doi.org/10.1038/444420a"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/444420a", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1041912982", 
              "https://doi.org/10.1038/444420a"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/nmeth.1184", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1042740345", 
              "https://doi.org/10.1038/nmeth.1184"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1093/nar/gkn879", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1044918953"
            ], 
            "type": "CreativeWork"
          }
        ], 
        "datePublished": "2010-05", 
        "datePublishedReg": "2010-05-01", 
        "genre": "non_research_article", 
        "id": "sg:pub.10.1038/nmeth.f.303", 
        "inLanguage": [
          "en"
        ], 
        "isAccessibleForFree": true, 
        "isFundedItemOf": [
          {
            "id": "sg:grant.2681199", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2691272", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2529347", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2684042", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2436201", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2684070", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2705038", 
            "type": "MonetaryGrant"
          }, 
          {
            "id": "sg:grant.2705096", 
            "type": "MonetaryGrant"
          }
        ], 
        "isPartOf": [
          {
            "id": "sg:journal.1033763", 
            "issn": [
              "1548-7091", 
              "1548-7105"
            ], 
            "name": "Nature Methods", 
            "type": "Periodical"
          }, 
          {
            "issueNumber": "5", 
            "type": "PublicationIssue"
          }, 
          {
            "type": "PublicationVolume", 
            "volumeNumber": "7"
          }
        ], 
        "name": "QIIME allows analysis of high-throughput community sequencing data", 
        "pagination": "335", 
        "productId": [
          {
            "name": "readcube_id", 
            "type": "PropertyValue", 
            "value": [
              "2b0786fd3d9c097652178dab4bc42eadb6d1dd86db114f7344078aaad1202a20"
            ]
          }, 
          {
            "name": "pubmed_id", 
            "type": "PropertyValue", 
            "value": [
              "20383131"
            ]
          }, 
          {
            "name": "nlm_unique_id", 
            "type": "PropertyValue", 
            "value": [
              "101215604"
            ]
          }, 
          {
            "name": "doi", 
            "type": "PropertyValue", 
            "value": [
              "10.1038/nmeth.f.303"
            ]
          }, 
          {
            "name": "dimensions_id", 
            "type": "PropertyValue", 
            "value": [
              "pub.1009032055"
            ]
          }
        ], 
        "sameAs": [
          "https://doi.org/10.1038/nmeth.f.303", 
          "https://app.dimensions.ai/details/publication/pub.1009032055"
        ], 
        "sdDataset": "articles", 
        "sdDatePublished": "2019-04-11T10:17", 
        "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
        "sdPublisher": {
          "name": "Springer Nature - SN SciGraph project", 
          "type": "Organization"
        }, 
        "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000348_0000000348/records_54313_00000000.jsonl", 
        "type": "ScholarlyArticle", 
        "url": "https://www.nature.com/articles/nmeth.f.303"
      }
    ]
     

    Download the RDF metadata as:  json-ld nt turtle xml License info

    HOW TO GET THIS DATA PROGRAMMATICALLY:

    JSON-LD is a popular format for linked data which is fully compatible with JSON.

    curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/nmeth.f.303'

    N-Triples is a line-based linked data format ideal for batch operations.

    curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/nmeth.f.303'

    Turtle is a human-readable linked data format.

    curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/nmeth.f.303'

    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/nmeth.f.303'


     

    This table displays all metadata directly associated to this object as RDF triples.

    299 TRIPLES      19 PREDICATES      32 URIs      20 LITERALS      9 BLANK NODES

    Subject Predicate Object
    1 sg:pub.10.1038/nmeth.f.303 schema:author N7f4771b6574843fbb394ffd2a94c48ac
    2 schema:citation sg:pub.10.1038/444420a
    3 sg:pub.10.1038/nmeth.1184
    4 sg:pub.10.1186/gb-2007-8-8-r171
    5 https://doi.org/10.1093/nar/gkn879
    6 https://doi.org/10.1101/gr.096651.109
    7 https://doi.org/10.1128/aem.01541-09
    8 schema:datePublished 2010-05
    9 schema:datePublishedReg 2010-05-01
    10 schema:genre non_research_article
    11 schema:inLanguage en
    12 schema:isAccessibleForFree true
    13 schema:isPartOf N9eec2e5e9c804cc78cc9e75f8911db93
    14 Nf168b587bd334a6baa6f3812e3e16d1e
    15 sg:journal.1033763
    16 schema:name QIIME allows analysis of high-throughput community sequencing data
    17 schema:pagination 335
    18 schema:productId N0af23fd4dbbb4367af66b977cf232b56
    19 N53bdcc5c283c4c26954dd6b8689aaafd
    20 Ne8abaeaa98324259b5acf352895eb612
    21 Nf3c9bed08e204f57aacc5f15027a2c01
    22 Nfbb1e393cc0a496fb5cd79d001c08511
    23 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009032055
    24 https://doi.org/10.1038/nmeth.f.303
    25 schema:sdDatePublished 2019-04-11T10:17
    26 schema:sdLicense https://scigraph.springernature.com/explorer/license/
    27 schema:sdPublisher N126ac255869c49158899c87df4fdf1e4
    28 schema:url https://www.nature.com/articles/nmeth.f.303
    29 sgo:license sg:explorer/license/
    30 sgo:sdDataset articles
    31 rdf:type schema:ScholarlyArticle
    32 N00946bbace334cc4a7e3d3975f14a6d3 rdf:first sg:person.01210162577.60
    33 rdf:rest Nd42812ef7f33487685b4e610a0104fe3
    34 N06311508a33544749e9989ebf3cb71f2 rdf:first sg:person.01260403722.50
    35 rdf:rest N4fe69bb55b9c454e87104975bacbf313
    36 N0af23fd4dbbb4367af66b977cf232b56 schema:name readcube_id
    37 schema:value 2b0786fd3d9c097652178dab4bc42eadb6d1dd86db114f7344078aaad1202a20
    38 rdf:type schema:PropertyValue
    39 N104f98eced6048bc80fffa045df6b3de rdf:first sg:person.01061615031.38
    40 rdf:rest N280edd4aade6486cba662f2b84e9ae61
    41 N10f10d7873ba40d1bb20c36d03ce8a85 rdf:first sg:person.01244225361.13
    42 rdf:rest N4654d2992ec54448b04cf2512949cc30
    43 N126ac255869c49158899c87df4fdf1e4 schema:name Springer Nature - SN SciGraph project
    44 rdf:type schema:Organization
    45 N280edd4aade6486cba662f2b84e9ae61 rdf:first N5d3e545a33444232a260b837a5ef7b27
    46 rdf:rest Nc7e69ea018fa48f7a986dc2a27b78264
    47 N2914119120c4429691653903d4557371 rdf:first sg:person.013751061307.10
    48 rdf:rest N3c28455895594e47b43f1cf147a162d6
    49 N3a1cc30c31624b51ae84046075d03349 rdf:first sg:person.0714463230.04
    50 rdf:rest N71b53caf968c4130b0fc3f3a12027589
    51 N3c28455895594e47b43f1cf147a162d6 rdf:first sg:person.01247001327.73
    52 rdf:rest Nfc923ec83a67423494287d28c0df1a63
    53 N3fb1479a89ec4ed9ad936f35d2e4354c schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    54 schema:familyName Walters
    55 schema:givenName William A
    56 rdf:type schema:Person
    57 N4654d2992ec54448b04cf2512949cc30 rdf:first sg:person.01216060406.79
    58 rdf:rest N5c203426bb20498997eac26d9054d024
    59 N4fe69bb55b9c454e87104975bacbf313 rdf:first Nd0403026f2a543beaba960305ed53f50
    60 rdf:rest N3a1cc30c31624b51ae84046075d03349
    61 N51420645e64c4c5bad00701e6d03c8c9 schema:name Luca Technologies, Golden, Colorado, USA.
    62 rdf:type schema:Organization
    63 N53bdcc5c283c4c26954dd6b8689aaafd schema:name doi
    64 schema:value 10.1038/nmeth.f.303
    65 rdf:type schema:PropertyValue
    66 N5b9610c4387c43e686fd1da8e0c4aab4 rdf:first N3fb1479a89ec4ed9ad936f35d2e4354c
    67 rdf:rest N00946bbace334cc4a7e3d3975f14a6d3
    68 N5c01d08d0e8a4522ac8c85c7223a7534 rdf:first sg:person.0672337357.81
    69 rdf:rest Nb631fead79914abd8fee7227c612a826
    70 N5c203426bb20498997eac26d9054d024 rdf:first sg:person.0611560436.51
    71 rdf:rest N104f98eced6048bc80fffa045df6b3de
    72 N5d3e545a33444232a260b837a5ef7b27 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    73 schema:familyName Peña
    74 schema:givenName Antonio Gonzalez
    75 rdf:type schema:Person
    76 N63f49167771c42fba5d5f2b81d2d7569 rdf:first sg:person.0725775131.01
    77 rdf:rest N5c01d08d0e8a4522ac8c85c7223a7534
    78 N70ea0f2e669a49c2bfbf9a88d3efd358 rdf:first sg:person.01065252767.89
    79 rdf:rest N5b9610c4387c43e686fd1da8e0c4aab4
    80 N71b53caf968c4130b0fc3f3a12027589 rdf:first sg:person.01140603373.08
    81 rdf:rest N70ea0f2e669a49c2bfbf9a88d3efd358
    82 N78cdb25b22bc497ebe73bd6a24950af0 rdf:first sg:person.01044776611.46
    83 rdf:rest N63f49167771c42fba5d5f2b81d2d7569
    84 N7ec87d9f58f046b0bacf86f7b67e3463 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    85 schema:familyName Goodrich
    86 schema:givenName Julia K
    87 rdf:type schema:Person
    88 N7f4771b6574843fbb394ffd2a94c48ac rdf:first sg:person.0624224157.70
    89 rdf:rest Nc15ca8ba50d44f88a647e6054088681e
    90 N83199271afbb4e9389a1e8fa4039150b rdf:first sg:person.0753705541.65
    91 rdf:rest N90cd9bf43df44a7b99ef1e3fc293a51f
    92 N90cd9bf43df44a7b99ef1e3fc293a51f rdf:first sg:person.016311745377.96
    93 rdf:rest rdf:nil
    94 N9eec2e5e9c804cc78cc9e75f8911db93 schema:volumeNumber 7
    95 rdf:type schema:PublicationVolume
    96 Nb631fead79914abd8fee7227c612a826 rdf:first sg:person.01324411177.44
    97 rdf:rest N06311508a33544749e9989ebf3cb71f2
    98 Nc15ca8ba50d44f88a647e6054088681e rdf:first sg:person.01242576526.02
    99 rdf:rest Nd85b7097e6ba405495d86fcc0289fb57
    100 Nc7e69ea018fa48f7a986dc2a27b78264 rdf:first N7ec87d9f58f046b0bacf86f7b67e3463
    101 rdf:rest N2914119120c4429691653903d4557371
    102 Nd0403026f2a543beaba960305ed53f50 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    103 schema:familyName Pirrung
    104 schema:givenName Meg
    105 rdf:type schema:Person
    106 Nd42812ef7f33487685b4e610a0104fe3 rdf:first sg:person.01161425357.49
    107 rdf:rest N83199271afbb4e9389a1e8fa4039150b
    108 Nd85b7097e6ba405495d86fcc0289fb57 rdf:first sg:person.01256275777.26
    109 rdf:rest N10f10d7873ba40d1bb20c36d03ce8a85
    110 Ne8abaeaa98324259b5acf352895eb612 schema:name dimensions_id
    111 schema:value pub.1009032055
    112 rdf:type schema:PropertyValue
    113 Nf168b587bd334a6baa6f3812e3e16d1e schema:issueNumber 5
    114 rdf:type schema:PublicationIssue
    115 Nf3c9bed08e204f57aacc5f15027a2c01 schema:name nlm_unique_id
    116 schema:value 101215604
    117 rdf:type schema:PropertyValue
    118 Nf5334a1cac384098bab1179745b27506 rdf:first sg:person.01054701157.41
    119 rdf:rest N78cdb25b22bc497ebe73bd6a24950af0
    120 Nfbb1e393cc0a496fb5cd79d001c08511 schema:name pubmed_id
    121 schema:value 20383131
    122 rdf:type schema:PropertyValue
    123 Nfc923ec83a67423494287d28c0df1a63 rdf:first sg:person.0616435110.50
    124 rdf:rest Nf5334a1cac384098bab1179745b27506
    125 sg:grant.2436201 http://pending.schema.org/fundedItem sg:pub.10.1038/nmeth.f.303
    126 rdf:type schema:MonetaryGrant
    127 sg:grant.2529347 http://pending.schema.org/fundedItem sg:pub.10.1038/nmeth.f.303
    128 rdf:type schema:MonetaryGrant
    129 sg:grant.2681199 http://pending.schema.org/fundedItem sg:pub.10.1038/nmeth.f.303
    130 rdf:type schema:MonetaryGrant
    131 sg:grant.2684042 http://pending.schema.org/fundedItem sg:pub.10.1038/nmeth.f.303
    132 rdf:type schema:MonetaryGrant
    133 sg:grant.2684070 http://pending.schema.org/fundedItem sg:pub.10.1038/nmeth.f.303
    134 rdf:type schema:MonetaryGrant
    135 sg:grant.2691272 http://pending.schema.org/fundedItem sg:pub.10.1038/nmeth.f.303
    136 rdf:type schema:MonetaryGrant
    137 sg:grant.2705038 http://pending.schema.org/fundedItem sg:pub.10.1038/nmeth.f.303
    138 rdf:type schema:MonetaryGrant
    139 sg:grant.2705096 http://pending.schema.org/fundedItem sg:pub.10.1038/nmeth.f.303
    140 rdf:type schema:MonetaryGrant
    141 sg:journal.1033763 schema:issn 1548-7091
    142 1548-7105
    143 schema:name Nature Methods
    144 rdf:type schema:Periodical
    145 sg:person.01044776611.46 schema:affiliation https://www.grid.ac/institutes/grid.5386.8
    146 schema:familyName Koenig
    147 schema:givenName Jeremy E
    148 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01044776611.46
    149 rdf:type schema:Person
    150 sg:person.01054701157.41 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    151 schema:familyName Knights
    152 schema:givenName Dan
    153 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01054701157.41
    154 rdf:type schema:Person
    155 sg:person.01061615031.38 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    156 schema:familyName Fierer
    157 schema:givenName Noah
    158 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01061615031.38
    159 rdf:type schema:Person
    160 sg:person.01065252767.89 schema:affiliation https://www.grid.ac/institutes/grid.4367.6
    161 schema:familyName Turnbaugh
    162 schema:givenName Peter J
    163 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01065252767.89
    164 rdf:type schema:Person
    165 sg:person.01140603373.08 schema:affiliation N51420645e64c4c5bad00701e6d03c8c9
    166 schema:familyName Sevinsky
    167 schema:givenName Joel R
    168 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01140603373.08
    169 rdf:type schema:Person
    170 sg:person.01161425357.49 schema:affiliation https://www.grid.ac/institutes/grid.4367.6
    171 schema:familyName Yatsunenko
    172 schema:givenName Tanya
    173 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01161425357.49
    174 rdf:type schema:Person
    175 sg:person.01210162577.60 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    176 schema:familyName Widmann
    177 schema:givenName Jeremy
    178 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01210162577.60
    179 rdf:type schema:Person
    180 sg:person.01216060406.79 schema:affiliation https://www.grid.ac/institutes/grid.25879.31
    181 schema:familyName Bushman
    182 schema:givenName Frederic D
    183 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01216060406.79
    184 rdf:type schema:Person
    185 sg:person.01242576526.02 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    186 schema:familyName Kuczynski
    187 schema:givenName Justin
    188 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01242576526.02
    189 rdf:type schema:Person
    190 sg:person.01244225361.13 schema:affiliation https://www.grid.ac/institutes/grid.25879.31
    191 schema:familyName Bittinger
    192 schema:givenName Kyle
    193 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01244225361.13
    194 rdf:type schema:Person
    195 sg:person.01247001327.73 schema:affiliation https://www.grid.ac/institutes/grid.1001.0
    196 schema:familyName Huttley
    197 schema:givenName Gavin A
    198 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01247001327.73
    199 rdf:type schema:Person
    200 sg:person.01256275777.26 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    201 schema:familyName Stombaugh
    202 schema:givenName Jesse
    203 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01256275777.26
    204 rdf:type schema:Person
    205 sg:person.01260403722.50 schema:affiliation https://www.grid.ac/institutes/grid.4367.6
    206 schema:familyName Muegge
    207 schema:givenName Brian D
    208 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01260403722.50
    209 rdf:type schema:Person
    210 sg:person.01324411177.44 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    211 schema:familyName McDonald
    212 schema:givenName Daniel
    213 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01324411177.44
    214 rdf:type schema:Person
    215 sg:person.013751061307.10 schema:affiliation https://www.grid.ac/institutes/grid.4367.6
    216 schema:familyName Gordon
    217 schema:givenName Jeffrey I
    218 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.013751061307.10
    219 rdf:type schema:Person
    220 sg:person.016311745377.96 schema:affiliation https://www.grid.ac/institutes/grid.413575.1
    221 schema:familyName Knight
    222 schema:givenName Rob
    223 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.016311745377.96
    224 rdf:type schema:Person
    225 sg:person.0611560436.51 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    226 schema:familyName Costello
    227 schema:givenName Elizabeth K
    228 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0611560436.51
    229 rdf:type schema:Person
    230 sg:person.0616435110.50 schema:affiliation https://www.grid.ac/institutes/grid.263081.e
    231 schema:familyName Kelley
    232 schema:givenName Scott T
    233 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0616435110.50
    234 rdf:type schema:Person
    235 sg:person.0624224157.70 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    236 schema:familyName Caporaso
    237 schema:givenName J Gregory
    238 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0624224157.70
    239 rdf:type schema:Person
    240 sg:person.0672337357.81 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    241 schema:familyName Lozupone
    242 schema:givenName Catherine A
    243 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0672337357.81
    244 rdf:type schema:Person
    245 sg:person.0714463230.04 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    246 schema:familyName Reeder
    247 schema:givenName Jens
    248 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0714463230.04
    249 rdf:type schema:Person
    250 sg:person.0725775131.01 schema:affiliation https://www.grid.ac/institutes/grid.5386.8
    251 schema:familyName Ley
    252 schema:givenName Ruth E
    253 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0725775131.01
    254 rdf:type schema:Person
    255 sg:person.0753705541.65 schema:affiliation https://www.grid.ac/institutes/grid.266190.a
    256 schema:familyName Zaneveld
    257 schema:givenName Jesse
    258 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0753705541.65
    259 rdf:type schema:Person
    260 sg:pub.10.1038/444420a schema:sameAs https://app.dimensions.ai/details/publication/pub.1041912982
    261 https://doi.org/10.1038/444420a
    262 rdf:type schema:CreativeWork
    263 sg:pub.10.1038/nmeth.1184 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042740345
    264 https://doi.org/10.1038/nmeth.1184
    265 rdf:type schema:CreativeWork
    266 sg:pub.10.1186/gb-2007-8-8-r171 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036049247
    267 https://doi.org/10.1186/gb-2007-8-8-r171
    268 rdf:type schema:CreativeWork
    269 https://doi.org/10.1093/nar/gkn879 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044918953
    270 rdf:type schema:CreativeWork
    271 https://doi.org/10.1101/gr.096651.109 schema:sameAs https://app.dimensions.ai/details/publication/pub.1034877175
    272 rdf:type schema:CreativeWork
    273 https://doi.org/10.1128/aem.01541-09 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038354310
    274 rdf:type schema:CreativeWork
    275 https://www.grid.ac/institutes/grid.1001.0 schema:alternateName Australian National University
    276 schema:name Computational Genomics Laboratory, John Curtin School of Medical Research, The Australian National University, Canberra, Australian Capital Territory, Australia.
    277 rdf:type schema:Organization
    278 https://www.grid.ac/institutes/grid.25879.31 schema:alternateName University of Pennsylvania
    279 schema:name Department of Microbiology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
    280 rdf:type schema:Organization
    281 https://www.grid.ac/institutes/grid.263081.e schema:alternateName San Diego State University
    282 schema:name Department of Biology, San Diego State University, San Diego, California, USA.
    283 rdf:type schema:Organization
    284 https://www.grid.ac/institutes/grid.266190.a schema:alternateName University of Colorado Boulder
    285 schema:name Cooperative Institute for Research in Environmental Sciences and Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado, USA.
    286 Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA.
    287 Department of Computer Science, University of Colorado, Boulder, Colorado, USA.
    288 Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, Colorado, USA.
    289 rdf:type schema:Organization
    290 https://www.grid.ac/institutes/grid.413575.1 schema:alternateName Howard Hughes Medical Institute
    291 schema:name Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, USA.
    292 Howard Hughes Medical Institute, Boulder, Colorado, USA.
    293 rdf:type schema:Organization
    294 https://www.grid.ac/institutes/grid.4367.6 schema:alternateName Washington University in St. Louis
    295 schema:name Center for Genome Sciences, Washington University School of Medicine, St. Louis, Missouri, USA.
    296 rdf:type schema:Organization
    297 https://www.grid.ac/institutes/grid.5386.8 schema:alternateName Cornell University
    298 schema:name Department of Microbiology, Cornell University, Ithaca, New York, USA.
    299 rdf:type schema:Organization
     




    Preview window. Press ESC to close (or click here)


    ...