Fiji: an open-source platform for biological-image analysis View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2012-07

AUTHORS

Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid, Jean-Yves Tinevez, Daniel James White, Volker Hartenstein, Kevin Eliceiri, Pavel Tomancak, Albert Cardona

ABSTRACT

Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis. Fiji uses modern software engineering practices to combine powerful software libraries with a broad range of scripting languages to enable rapid prototyping of image-processing algorithms. Fiji facilitates the transformation of new algorithms into ImageJ plugins that can be shared with end users through an integrated update system. We propose Fiji as a platform for productive collaboration between computer science and biology research communities. More... »

PAGES

676

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  • Journal

    TITLE

    Nature Methods

    ISSUE

    7

    VOLUME

    9

    Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/nmeth.2019

    DOI

    http://dx.doi.org/10.1038/nmeth.2019

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1026706357

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/22743772


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