Single-tube linear DNA amplification (LinDA) for robust ChIP-seq View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2011-06-05

AUTHORS

Pattabhiraman Shankaranarayanan, Marco-Antonio Mendoza-Parra, Mannu Walia, Li Wang, Ning Li, Luisa M Trindade, Hinrich Gronemeyer

ABSTRACT

Genome-wide profiling of transcription factors based on massive parallel sequencing of immunoprecipitated chromatin (ChIP-seq) requires nanogram amounts of DNA. Here we describe a high-fidelity, single-tube linear DNA amplification method (LinDA) for ChIP-seq and reChIP-seq with picogram DNA amounts obtained from a few thousand cells. This amplification technology will facilitate global analyses of transcription-factor binding and chromatin with very small cell populations, such as stem or cancer-initiating cells. More... »

PAGES

565

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/nmeth.1626

DOI

http://dx.doi.org/10.1038/nmeth.1626

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1038982572

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/21642965


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