Ontology type: schema:ScholarlyArticle Open Access: True
2009-08-02
AUTHORSArthur Brady, Steven L Salzberg
ABSTRACTThis algorithm for the assignment of phylogenetic groups to fragments generated by metagenomic sequencing projects improves on the currently required 1 kb fragment length for classification. Trained on 539 complete genomes, Phymm can classify reads as short as 100 bp. Combining Phymm with the sequence alignment algorithm BLAST further improves accuracy. More... »
PAGES673-676
http://scigraph.springernature.com/pub.10.1038/nmeth.1358
DOIhttp://dx.doi.org/10.1038/nmeth.1358
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PUBMEDhttps://www.ncbi.nlm.nih.gov/pubmed/19648916
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