Minimum information about a microarray experiment (MIAME)—toward standards for microarray data View Full Text


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Article Info

DATE

2001-12

AUTHORS

A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, C Stoeckert, J Aach, W Ansorge, C A Ball, H C Causton, T Gaasterland, P Glenisson, F C Holstege, I F Kim, V Markowitz, J C Matese, H Parkinson, A Robinson, U Sarkans, S Schulze-Kremer, J Stewart, R Taylor, J Vilo, M Vingron

ABSTRACT

Microarray analysis has become a widely used tool for the generation of gene expression data on a genomic scale. Although many significant results have been derived from microarray studies, one limitation has been the lack of standards for presenting and exchanging such data. Here we present a proposal, the Minimum Information About a Microarray Experiment (MIAME), that describes the minimum information required to ensure that microarray data can be easily interpreted and that results derived from its analysis can be independently verified. The ultimate goal of this work is to establish a standard for recording and reporting microarray-based gene expression data, which will in turn facilitate the establishment of databases and public repositories and enable the development of data analysis tools. With respect to MIAME, we concentrate on defining the content and structure of the necessary information rather than the technical format for capturing it. More... »

PAGES

365-371

References to SciGraph publications

  • 2001-04. Free and public expression in NATURE
  • 1999-01. Exploring the new world of the genome with DNA microarrays in NATURE GENETICS
  • 2000-06. Genomics, gene expression and DNA arrays in NATURE
  • 1999-01. Gene expression informatics —it's all in your mine in NATURE GENETICS
  • 2000-02. One-stop shop for microarray data in NATURE
  • 1999-01. Going global in NATURE GENETICS
  • 2001-06. Computational analysis of microarray data in NATURE REVIEWS GENETICS
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ng1201-365

    DOI

    http://dx.doi.org/10.1038/ng1201-365

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1003793347

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/11726920


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