Exome-wide association study of plasma lipids in >300,000 individuals View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2017-12

AUTHORS

Dajiang J Liu, Gina M Peloso, Haojie Yu, Adam S Butterworth, Xiao Wang, Anubha Mahajan, Danish Saleheen, Connor Emdin, Dewan Alam, Alexessander Couto Alves, Philippe Amouyel, Emanuele Di Angelantonio, Dominique Arveiler, Themistocles L Assimes, Paul L Auer, Usman Baber, Christie M Ballantyne, Lia E Bang, Marianne Benn, Joshua C Bis, Michael Boehnke, Eric Boerwinkle, Jette Bork-Jensen, Erwin P Bottinger, Ivan Brandslund, Morris Brown, Fabio Busonero, Mark J Caulfield, John C Chambers, Daniel I Chasman, Y Eugene Chen, Yii-Der Ida Chen, Rajiv Chowdhury, Cramer Christensen, Audrey Y Chu, John M Connell, Francesco Cucca, L Adrienne Cupples, Scott M Damrauer, Gail Davies, Ian J Deary, George Dedoussis, Joshua C Denny, Anna Dominiczak, Marie-Pierre Dubé, Tapani Ebeling, Gudny Eiriksdottir, Tõnu Esko, Aliki-Eleni Farmaki, Mary F Feitosa, Marco Ferrario, Jean Ferrieres, Ian Ford, Myriam Fornage, Paul W Franks, Timothy M Frayling, Ruth Frikke-Schmidt, Lars G Fritsche, Philippe Frossard, Valentin Fuster, Santhi K Ganesh, Wei Gao, Melissa E Garcia, Christian Gieger, Franco Giulianini, Mark O Goodarzi, Harald Grallert, Niels Grarup, Leif Groop, Megan L Grove, Vilmundur Gudnason, Torben Hansen, Tamara B Harris, Caroline Hayward, Joel N Hirschhorn, Oddgeir L Holmen, Jennifer Huffman, Yong Huo, Kristian Hveem, Sehrish Jabeen, Anne U Jackson, Johanna Jakobsdottir, Marjo-Riitta Jarvelin, Gorm B Jensen, Marit E Jørgensen, J Wouter Jukema, Johanne M Justesen, Pia R Kamstrup, Stavroula Kanoni, Fredrik Karpe, Frank Kee, Amit V Khera, Derek Klarin, Heikki A Koistinen, Jaspal S Kooner, Charles Kooperberg, Kari Kuulasmaa, Johanna Kuusisto, Markku Laakso, Timo Lakka, Claudia Langenberg, Anne Langsted, Lenore J Launer, Torsten Lauritzen, David C M Liewald, Li An Lin, Allan Linneberg, Ruth J F Loos, Yingchang Lu, Xiangfeng Lu, Reedik Mägi, Anders Malarstig, Ani Manichaikul, Alisa K Manning, Pekka Mäntyselkä, Eirini Marouli, Nicholas G D Masca, Andrea Maschio, James B Meigs, Olle Melander, Andres Metspalu, Andrew P Morris, Alanna C Morrison, Antonella Mulas, Martina Müller-Nurasyid, Patricia B Munroe, Matt J Neville, Jonas B Nielsen, Sune F Nielsen, Børge G Nordestgaard, Jose M Ordovas, Roxana Mehran, Christoper J O'Donnell, Marju Orho-Melander, Cliona M Molony, Pieter Muntendam, Sandosh Padmanabhan, Colin N A Palmer, Dorota Pasko, Aniruddh P Patel, Oluf Pedersen, Markus Perola, Annette Peters, Charlotta Pisinger, Giorgio Pistis, Ozren Polasek, Neil Poulter, Bruce M Psaty, Daniel J Rader, Asif Rasheed, Rainer Rauramaa, Dermot F Reilly, Alex P Reiner, Frida Renström, Stephen S Rich, Paul M Ridker, John D Rioux, Neil R Robertson, Dan M Roden, Jerome I Rotter, Igor Rudan, Veikko Salomaa, Nilesh J Samani, Serena Sanna, Naveed Sattar, Ellen M Schmidt, Robert A Scott, Peter Sever, Raquel S Sevilla, Christian M Shaffer, Xueling Sim, Suthesh Sivapalaratnam, Kerrin S Small, Albert V Smith, Blair H Smith, Sangeetha Somayajula, Lorraine Southam, Timothy D Spector, Elizabeth K Speliotes, John M Starr, Kathleen E Stirrups, Nathan Stitziel, Konstantin Strauch, Heather M Stringham, Praveen Surendran, Hayato Tada, Alan R Tall, Hua Tang, Jean-Claude Tardif, Kent D Taylor, Stella Trompet, Philip S Tsao, Jaakko Tuomilehto, Anne Tybjaerg-Hansen, Natalie R van Zuydam, Anette Varbo, Tibor V Varga, Jarmo Virtamo, Melanie Waldenberger, Nan Wang, Nick J Wareham, Helen R Warren, Peter E Weeke, Joshua Weinstock, Jennifer Wessel, James G Wilson, Peter W F Wilson, Ming Xu, Hanieh Yaghootkar, Robin Young, Eleftheria Zeggini, He Zhang, Neil S Zheng, Weihua Zhang, Yan Zhang, Wei Zhou, Yanhua Zhou, Magdalena Zoledziewska, Charge Diabetes Working Group, The EPIC-InterAct Consortium, EPIC-CVD Consortium, GOLD Consortium, VA Million Veteran Program, Joanna M M Howson, John Danesh, Mark I McCarthy, Chad A Cowan, Goncalo Abecasis, Panos Deloukas, Kiran Musunuru, Cristen J Willer, Sekar Kathiresan

ABSTRACT

We screened variants on an exome-focused genotyping array in >300,000 participants (replication in >280,000 participants) and identified 444 independent variants in 250 loci significantly associated with total cholesterol (TC), high-density-lipoprotein cholesterol (HDL-C), low-density-lipoprotein cholesterol (LDL-C), and/or triglycerides (TG). At two loci (JAK2 and A1CF), experimental analysis in mice showed lipid changes consistent with the human data. We also found that: (i) beta-thalassemia trait carriers displayed lower TC and were protected from coronary artery disease (CAD); (ii) excluding the CETP locus, there was not a predictable relationship between plasma HDL-C and risk for age-related macular degeneration; (iii) only some mechanisms of lowering LDL-C appeared to increase risk for type 2 diabetes (T2D); and (iv) TG-lowering alleles involved in hepatic production of TG-rich lipoproteins (TM6SF2 and PNPLA3) tracked with higher liver fat, higher risk for T2D, and lower risk for CAD, whereas TG-lowering alleles involved in peripheral lipolysis (LPL and ANGPTL4) had no effect on liver fat but decreased risks for both T2D and CAD. More... »

PAGES

1758

References to SciGraph publications

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  • Journal

    TITLE

    Nature Genetics

    ISSUE

    12

    VOLUME

    49

    Author Affiliations

  • Penn State Milton S. Hershey Medical Center
  • Broad Institute
  • Harvard University
  • University of Cambridge
  • University of Pennsylvania
  • Wellcome Centre for Human Genetics
  • Center for Non-Communicable Diseases
  • Massachusetts General Hospital
  • International Centre for Diarrhoeal Disease Research
  • Imperial College London
  • University of Strasbourg
  • Stanford University
  • University of Wisconsin–Milwaukee
  • Baylor College of Medicine
  • University of Copenhagen
  • University of Washington
  • University of Michigan–Ann Arbor
  • Icahn School of Medicine at Mount Sinai
  • University of Southern Denmark
  • Queen Mary University of London
  • Institute of Genetic and Biomedical Research
  • Imperial College Healthcare NHS Trust
  • University of California Los Angeles
  • Sygehus Lillebælt
  • Brigham and Women's Hospital
  • University of Sassari
  • Boston University
  • University of Edinburgh
  • Harokopio University
  • Vanderbilt University Medical Center
  • University of Glasgow
  • University of Montreal
  • University of Oulu
  • Icelandic Heart Association
  • University of Tartu
  • Washington University in St. Louis
  • University of Insubria
  • University of Toulouse
  • The University of Texas Health Science Center at Houston
  • University of Exeter
  • Spanish National Centre for Cardiovascular Research
  • National Heart Lung and Blood Institute
  • Helmholtz Zentrum München
  • Cedars-Sinai Medical Center
  • Lund University
  • University of Iceland
  • National Institute on Aging
  • Boston Children's Hospital
  • St Olav's University Hospital
  • Peking University First Hospital
  • Norwegian University of Science and Technology
  • Frederiksberg Hospital
  • Danish National Institute of Public Health
  • Netherlands Heart Institute
  • NIHR Oxford Musculoskeletal Biomedical Research Unit
  • VA Boston Healthcare System
  • Minerva Foundation
  • Fred Hutchinson Cancer Research Center
  • National Institute for Health and Welfare
  • Kuopio University Hospital
  • Institute of Metabolic Science
  • Technical University of Denmark
  • Aarhus University
  • Peking Union Medical College Hospital
  • University of Virginia
  • Glenfield Hospital
  • University of Liverpool
  • German Centre for Cardiovascular Research
  • University of Oxford
  • Tufts University
  • University of Helsinki
  • Umeå University
  • Montreal Heart Institute
  • National University of Singapore
  • King's College London
  • Wellcome Sanger Institute
  • Kanazawa University
  • Columbia University
  • Leiden University Medical Center
  • King Abdulaziz University
  • Indiana University – Purdue University Indianapolis
  • University of Mississippi Medical Center
  • Atlanta VA Medical Center
  • Ministry of Education of the People's Republic of China
  • Yale University
  • From Grant

  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ng.3977

    DOI

    http://dx.doi.org/10.1038/ng.3977

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1092440097

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/29083408


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