Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2017-05

AUTHORS

Catherine M Phelan, Karoline B Kuchenbaecker, Jonathan P Tyrer, Siddhartha P Kar, Kate Lawrenson, Stacey J Winham, Joe Dennis, Ailith Pirie, Marjorie J Riggan, Ganna Chornokur, Madalene A Earp, Paulo C Lyra, Janet M Lee, Simon Coetzee, Jonathan Beesley, Lesley McGuffog, Penny Soucy, Ed Dicks, Andrew Lee, Daniel Barrowdale, Julie Lecarpentier, Goska Leslie, Cora M Aalfs, Katja K H Aben, Marcia Adams, Julian Adlard, Irene L Andrulis, Hoda Anton-Culver, Natalia Antonenkova, AOCS study group, Gerasimos Aravantinos, Norbert Arnold, Banu K Arun, Brita Arver, Jacopo Azzollini, Judith Balmaña, Susana N Banerjee, Laure Barjhoux, Rosa B Barkardottir, Yukie Bean, Matthias W Beckmann, Alicia Beeghly-Fadiel, Javier Benitez, Marina Bermisheva, Marcus Q Bernardini, Michael J Birrer, Line Bjorge, Amanda Black, Kenneth Blankstein, Marinus J Blok, Clara Bodelon, Natalia Bogdanova, Anders Bojesen, Bernardo Bonanni, Åke Borg, Angela R Bradbury, James D Brenton, Carole Brewer, Louise Brinton, Per Broberg, Angela Brooks-Wilson, Fiona Bruinsma, Joan Brunet, Bruno Buecher, Ralf Butzow, Saundra S Buys, Trinidad Caldes, Maria A Caligo, Ian Campbell, Rikki Cannioto, Michael E Carney, Terence Cescon, Salina B Chan, Jenny Chang-Claude, Stephen Chanock, Xiao Qing Chen, Yoke-Eng Chiew, Jocelyne Chiquette, Wendy K Chung, Kathleen B M Claes, Thomas Conner, Linda S Cook, Jackie Cook, Daniel W Cramer, Julie M Cunningham, Aimee A D'Aloisio, Mary B Daly, Francesca Damiola, Sakaeva Dina Damirovna, Agnieszka Dansonka-Mieszkowska, Fanny Dao, Rosemarie Davidson, Anna DeFazio, Capucine Delnatte, Kimberly F Doheny, Orland Diez, Yuan Chun Ding, Jennifer Anne Doherty, Susan M Domchek, Cecilia M Dorfling, Thilo Dörk, Laure Dossus, Mercedes Duran, Matthias Dürst, Bernd Dworniczak, Diana Eccles, Todd Edwards, Ros Eeles, Ursula Eilber, Bent Ejlertsen, Arif B Ekici, Steve Ellis, Mingajeva Elvira, ERACE Study, Kevin H Eng, Christoph Engel, D Gareth Evans, Peter A Fasching, Sarah Ferguson, Sandra Fert Ferrer, James M Flanagan, Zachary C Fogarty, Renée T Fortner, Florentia Fostira, William D Foulkes, George Fountzilas, Brooke L Fridley, Tara M Friebel, Eitan Friedman, Debra Frost, Patricia A Ganz, Judy Garber, María J García, Vanesa Garcia-Barberan, Andrea Gehrig, GEMO Study Collaborators, Aleksandra Gentry-Maharaj, Anne-Marie Gerdes, Graham G Giles, Rosalind Glasspool, Gord Glendon, Andrew K Godwin, David E Goldgar, Teodora Goranova, Martin Gore, Mark H Greene, Jacek Gronwald, Stephen Gruber, Eric Hahnen, Christopher A Haiman, Niclas Håkansson, Ute Hamann, Thomas V O Hansen, Patricia A Harrington, Holly R Harris, Jan Hauke, HEBON Study, Alexander Hein, Alex Henderson, Michelle A T Hildebrandt, Peter Hillemanns, Shirley Hodgson, Claus K Høgdall, Estrid Høgdall, Frans B L Hogervorst, Helene Holland, Maartje J Hooning, Karen Hosking, Ruea-Yea Huang, Peter J Hulick, Jillian Hung, David J Hunter, David G Huntsman, Tomasz Huzarski, Evgeny N Imyanitov, Claudine Isaacs, Edwin S Iversen, Louise Izatt, Angel Izquierdo, Anna Jakubowska, Paul James, Ramunas Janavicius, Mats Jernetz, Allan Jensen, Uffe Birk Jensen, Esther M John, Sharon Johnatty, Michael E Jones, Päivi Kannisto, Beth Y Karlan, Anthony Karnezis, Karin Kast, KConFab Investigators, Catherine J Kennedy, Elza Khusnutdinova, Lambertus A Kiemeney, Johanna I Kiiski, Sung-Won Kim, Susanne K Kjaer, Martin Köbel, Reidun K Kopperud, Torben A Kruse, Jolanta Kupryjanczyk, Ava Kwong, Yael Laitman, Diether Lambrechts, Nerea Larrañaga, Melissa C Larson, Conxi Lazaro, Nhu D Le, Loic Le Marchand, Jong Won Lee, Shashikant B Lele, Arto Leminen, Dominique Leroux, Jenny Lester, Fabienne Lesueur, Douglas A Levine, Dong Liang, Clemens Liebrich, Jenna Lilyquist, Loren Lipworth, Jolanta Lissowska, Karen H Lu, Jan Lubinński, Craig Luccarini, Lene Lundvall, Phuong L Mai, Gustavo Mendoza-Fandiño, Siranoush Manoukian, Leon F A G Massuger, Taymaa May, Sylvie Mazoyer, Jessica N McAlpine, Valerie McGuire, John R McLaughlin, Iain McNeish, Hanne Meijers-Heijboer, Alfons Meindl, Usha Menon, Arjen R Mensenkamp, Melissa A Merritt, Roger L Milne, Gillian Mitchell, Francesmary Modugno, Joanna Moes-Sosnowska, Melissa Moffitt, Marco Montagna, Kirsten B Moysich, Anna Marie Mulligan, Jacob Musinsky, Katherine L Nathanson, Lotte Nedergaard, Roberta B Ness, Susan L Neuhausen, Heli Nevanlinna, Dieter Niederacher, Robert L Nussbaum, Kunle Odunsi, Edith Olah, Olufunmilayo I Olopade, Håkan Olsson, Curtis Olswold, David M O'Malley, Kai-ren Ong, N Charlotte Onland-Moret, OPAL study group, Nicholas Orr, Sandra Orsulic, Ana Osorio, Domenico Palli, Laura Papi, Tjoung-Won Park-Simon, James Paul, Celeste L Pearce, Inge Søkilde Pedersen, Petra H M Peeters, Bernard Peissel, Ana Peixoto, Tanja Pejovic, Liisa M Pelttari, Jennifer B Permuth, Paolo Peterlongo, Lidia Pezzani, Georg Pfeiler, Kelly-Anne Phillips, Marion Piedmonte, Malcolm C Pike, Anna M Piskorz, Samantha R Poblete, Timea Pocza, Elizabeth M Poole, Bruce Poppe, Mary E Porteous, Fabienne Prieur, Darya Prokofyeva, Elizabeth Pugh, Miquel Angel Pujana, Pascal Pujol, Paolo Radice, Johanna Rantala, Christine Rappaport-Fuerhauser, Gad Rennert, Kerstin Rhiem, Patricia Rice, Andrea Richardson, Mark Robson, Gustavo C Rodriguez, Cristina Rodríguez-Antona, Jane Romm, Matti A Rookus, Mary Anne Rossing, Joseph H Rothstein, Anja Rudolph, Ingo B Runnebaum, Helga B Salvesen, Dale P Sandler, Minouk J Schoemaker, Leigha Senter, V Wendy Setiawan, Gianluca Severi, Priyanka Sharma, Tameka Shelford, Nadeem Siddiqui, Lucy E Side, Weiva Sieh, Christian F Singer, Hagay Sobol, Honglin Song, Melissa C Southey, Amanda B Spurdle, Zsofia Stadler, Doris Steinemann, Dominique Stoppa-Lyonnet, Lara E Sucheston-Campbell, Grzegorz Sukiennicki, Rebecca Sutphen, Christian Sutter, Anthony J Swerdlow, Csilla I Szabo, Lukasz Szafron, Yen Y Tan, Jack A Taylor, Muy-Kheng Tea, Manuel R Teixeira, Soo-Hwang Teo, Kathryn L Terry, Pamela J Thompson, Liv Cecilie Vestrheim Thomsen, Darcy L Thull, Laima Tihomirova, Anna V Tinker, Marc Tischkowitz, Silvia Tognazzo, Amanda Ewart Toland, Alicia Tone, Britton Trabert, Ruth C Travis, Antonia Trichopoulou, Nadine Tung, Shelley S Tworoger, Anne M van Altena, David Van Den Berg, Annemarie H van der Hout, Rob B van der Luijt, Mattias Van Heetvelde, Els Van Nieuwenhuysen, Elizabeth J van Rensburg, Adriaan Vanderstichele, Raymonda Varon-Mateeva, Ana Vega, Digna Velez Edwards, Ignace Vergote, Robert A Vierkant, Joseph Vijai, Athanassios Vratimos, Lisa Walker, Christine Walsh, Dorothea Wand, Shan Wang-Gohrke, Barbara Wappenschmidt, Penelope M Webb, Clarice R Weinberg, Jeffrey N Weitzel, Nicolas Wentzensen, Alice S Whittemore, Juul T Wijnen, Lynne R Wilkens, Alicja Wolk, Michelle Woo, Xifeng Wu, Anna H Wu, Hannah Yang, Drakoulis Yannoukakos, Argyrios Ziogas, Kristin K Zorn, Steven A Narod, Douglas F Easton, Christopher I Amos, Joellen M Schildkraut, Susan J Ramus, Laura Ottini, Marc T Goodman, Sue K Park, Linda E Kelemen, Harvey A Risch, Mads Thomassen, Kenneth Offit, Jacques Simard, Rita Katharina Schmutzler, Dennis Hazelett, Alvaro N Monteiro, Fergus J Couch, Andrew Berchuck, Georgia Chenevix-Trench, Ellen L Goode, Thomas A Sellers, Simon A Gayther, Antonis C Antoniou, Paul D P Pharoah

ABSTRACT

To identify common alleles associated with different histotypes of epithelial ovarian cancer (EOC), we pooled data from multiple genome-wide genotyping projects totaling 25,509 EOC cases and 40,941 controls. We identified nine new susceptibility loci for different EOC histotypes: six for serous EOC histotypes (3q28, 4q32.3, 8q21.11, 10q24.33, 18q11.2 and 22q12.1), two for mucinous EOC (3q22.3 and 9q31.1) and one for endometrioid EOC (5q12.3). We then performed meta-analysis on the results for high-grade serous ovarian cancer with the results from analysis of 31,448 BRCA1 and BRCA2 mutation carriers, including 3,887 mutation carriers with EOC. This identified three additional susceptibility loci at 2q13, 8q24.1 and 12q24.31. Integrated analyses of genes and regulatory biofeatures at each locus predicted candidate susceptibility genes, including OBFC1, a new candidate susceptibility gene for low-grade and borderline serous EOC. More... »

PAGES

680-691

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  • Journal

    TITLE

    Nature Genetics

    ISSUE

    5

    VOLUME

    49

    Author Affiliations

  • Moffitt Cancer Center
  • University of Cambridge
  • Cedars-Sinai Medical Center
  • Mayo Clinic
  • Duke University Hospital
  • QIMR Berghofer Medical Research Institute
  • Université Laval
  • Academic Medical Center
  • Netherlands Comprehensive Cancer Organisation
  • Johns Hopkins University
  • Chapel Allerton Hospital
  • University of Toronto
  • University of California, Irvine
  • N.N. Alexandrov National Cancer Centre
  • Hospital Agioi Anargyroi
  • The University of Texas MD Anderson Cancer Center
  • Karolinska Institute
  • Istituto Nazionale dei Tumori
  • Hospital Universitari Vall d'Hebron
  • Royal Marsden Hospital
  • Centre Léon Bérard
  • University of Iceland
  • Oregon Health & Science University
  • Vanderbilt University
  • Centre for Biomedical Network Research on Rare Diseases
  • Russian Academy of Sciences
  • Princess Margaret Cancer Centre
  • Massachusetts General Hospital
  • University of Bergen
  • National Cancer Institute
  • Maastricht University Medical Centre
  • Hannover Medical School
  • Vejle Sygehus
  • European Institute of Oncology
  • Skåne University Hospital
  • Royal Devon and Exeter Hospital
  • BC Cancer Agency
  • Cancer Council Victoria
  • Institut Català d'Oncologia
  • Institute Curie
  • Helsinki University Central Hospital
  • Huntsman Cancer Institute
  • Hospital Clínico San Carlos
  • Azienda Ospedaliera Universitaria Pisana
  • University of Melbourne
  • Roswell Park Cancer Institute
  • University of Hawaii at Manoa
  • University of California, San Francisco
  • University Cancer Center Hamburg
  • Westmead Hospital
  • Centre Hospitalier Universitaire de Québec
  • Columbia University
  • Ghent University
  • University of New Mexico
  • Sheffield Children's Hospital
  • Harvard University
  • Social and Scientific Systems (United States)
  • Temple University Health System
  • Bashkir State University
  • Centrum Onkologii Instytut
  • Memorial Sloan Kettering Cancer Center
  • University of Glasgow
  • Hospital Clinic of Barcelona
  • City Of Hope National Medical Center
  • Dartmouth College
  • University of Pretoria
  • International Agency For Research On Cancer
  • University of Valladolid
  • University of Bonn
  • University Hospital Southampton NHS Foundation Trust
  • German Cancer Research Center
  • University of Erlangen-Nuremberg
  • Leipzig University
  • University of Manchester
  • University of California Los Angeles
  • Centre Hospitalier de Chambéry
  • Imperial College London
  • National Centre of Scientific Research Demokritos
  • McGill University
  • Aristotle University of Thessaloniki
  • University of Kansas Medical Center
  • Tel Aviv University
  • Dana–Farber Cancer Institute
  • University of Würzburg
  • University College London
  • Monash University
  • Beatson West of Scotland Cancer Centre
  • Mount Sinai Hospital
  • University of Utah
  • National Institutes of Health
  • Pomeranian Medical University
  • University of Southern California
  • University Hospital Cologne
  • St George's, University of London
  • University of Copenhagen
  • Antoni van Leeuwenhoek Hospital
  • Erasmus University Medical Center
  • NorthShore University HealthSystem
  • Institute of Oncology NN Petrov
  • Georgetown University Medical Center
  • Duke University
  • Guy's and St Thomas' NHS Foundation Trust
  • State Research Institute Centre for Innovative Medicine
  • Danish Cancer Society
  • Aarhus University Hospital
  • Cancer Prevention Institute of California
  • Institute of Cancer Research
  • Radboud University Nijmegen Medical Centre
  • Seoul St. Mary's Hospital
  • University of Calgary
  • Odense University Hospital
  • Hong Kong Sanatorium and Hospital
  • KU Leuven
  • Institut d'Investigació Biomédica de Bellvitge
  • Asan Medical Center
  • Centre Hospitalier Universitaire de Grenoble
  • Texas Southern University
  • Cancer Center of Lyon
  • Stanford University
  • Public Health Ontario
  • VU University Medical Center
  • University of Pittsburgh Cancer Institute
  • Istituto Oncologico Veneto
  • St. Michael's Hospital
  • The University of Texas Health Science Center at Houston
  • National Institute of Oncology
  • University of Chicago Medical Center
  • University Medical Center Utrecht
  • Spanish National Cancer Research Centre
  • Istituto per lo Studio e la Prevenzione Oncologica
  • University of Florence
  • University of Michigan–Ann Arbor
  • Aalborg Hospital
  • Portuguese Oncology Institute
  • Peter MacCallum Cancer Centre
  • Brigham and Women's Hospital
  • Western General Hospital
  • Hôpital Arnaud De Villeneuve
  • Karolinska University Hospital
  • Technion – Israel Institute of Technology
  • Fred Hutchinson Cancer Research Center
  • National Institute of Environmental Health Sciences
  • The Ohio State University
  • University of Paris-Saclay
  • Glasgow Royal Infirmary
  • Great Ormond Street Hospital for Children NHS Foundation Trust
  • Institute Paoli-Calmettes
  • University of South Florida
  • University Hospital Heidelberg
  • National Human Genome Research Institute
  • University of Porto
  • Latvian Biomedical Research and Study Centre
  • Addenbrooke's Hospital
  • University of Oxford
  • National and Kapodistrian University of Athens
  • Beth Israel Deaconess Medical Center
  • Universitaire Ziekenhuizen Leuven
  • Charité
  • University of Santiago de Compostela
  • Vanderbilt University Medical Center
  • Churchill Hospital
  • University Hospital Leipzig
  • University of Ulm
  • Leiden University Medical Center
  • University of Virginia
  • Garvan Institute of Medical Research
  • Sapienza University of Rome
  • Seoul National University
  • Medical University of South Carolina
  • Yale University
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ng.3826

    DOI

    http://dx.doi.org/10.1038/ng.3826

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1084129162

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/28346442


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