Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2013-05

AUTHORS

Sonja I Berndt, Stefan Gustafsson, Reedik Mägi, Andrea Ganna, Eleanor Wheeler, Mary F Feitosa, Anne E Justice, Keri L Monda, Damien C Croteau-Chonka, Felix R Day, Tõnu Esko, Tove Fall, Teresa Ferreira, Davide Gentilini, Anne U Jackson, Jian'an Luan, Joshua C Randall, Sailaja Vedantam, Cristen J Willer, Thomas W Winkler, Andrew R Wood, Tsegaselassie Workalemahu, Yi-Juan Hu, Sang Hong Lee, Liming Liang, Dan-Yu Lin, Josine L Min, Benjamin M Neale, Gudmar Thorleifsson, Jian Yang, Eva Albrecht, Najaf Amin, Jennifer L Bragg-Gresham, Gemma Cadby, Martin den Heijer, Niina Eklund, Krista Fischer, Anuj Goel, Jouke-Jan Hottenga, Jennifer E Huffman, Ivonne Jarick, Åsa Johansson, Toby Johnson, Stavroula Kanoni, Marcus E Kleber, Inke R König, Kati Kristiansson, Zoltán Kutalik, Claudia Lamina, Cecile Lecoeur, Guo Li, Massimo Mangino, Wendy L McArdle, Carolina Medina-Gomez, Martina Müller-Nurasyid, Julius S Ngwa, Ilja M Nolte, Lavinia Paternoster, Sonali Pechlivanis, Markus Perola, Marjolein J Peters, Michael Preuss, Lynda M Rose, Jianxin Shi, Dmitry Shungin, Albert Vernon Smith, Rona J Strawbridge, Ida Surakka, Alexander Teumer, Mieke D Trip, Jonathan Tyrer, Jana V Van Vliet-Ostaptchouk, Liesbeth Vandenput, Lindsay L Waite, Jing Hua Zhao, Devin Absher, Folkert W Asselbergs, Mustafa Atalay, Antony P Attwood, Anthony J Balmforth, Hanneke Basart, John Beilby, Lori L Bonnycastle, Paolo Brambilla, Marcel Bruinenberg, Harry Campbell, Daniel I Chasman, Peter S Chines, Francis S Collins, John M Connell, William O Cookson, Ulf de Faire, Femmie de Vegt, Mariano Dei, Maria Dimitriou, Sarah Edkins, Karol Estrada, David M Evans, Martin Farrall, Marco M Ferrario, Jean Ferrières, Lude Franke, Francesca Frau, Pablo V Gejman, Harald Grallert, Henrik Grönberg, Vilmundur Gudnason, Alistair S Hall, Per Hall, Anna-Liisa Hartikainen, Caroline Hayward, Nancy L Heard-Costa, Andrew C Heath, Johannes Hebebrand, Georg Homuth, Frank B Hu, Sarah E Hunt, Elina Hyppönen, Carlos Iribarren, Kevin B Jacobs, John-Olov Jansson, Antti Jula, Mika Kähönen, Sekar Kathiresan, Frank Kee, Kay-Tee Khaw, Mika Kivimäki, Wolfgang Koenig, Aldi T Kraja, Meena Kumari, Kari Kuulasmaa, Johanna Kuusisto, Jaana H Laitinen, Timo A Lakka, Claudia Langenberg, Lenore J Launer, Lars Lind, Jaana Lindström, Jianjun Liu, Antonio Liuzzi, Marja-Liisa Lokki, Mattias Lorentzon, Pamela A Madden, Patrik K Magnusson, Paolo Manunta, Diana Marek, Winfried März, Irene Mateo Leach, Barbara McKnight, Sarah E Medland, Evelin Mihailov, Lili Milani, Grant W Montgomery, Vincent Mooser, Thomas W Mühleisen, Patricia B Munroe, Arthur W Musk, Narisu Narisu, Gerjan Navis, George Nicholson, Ellen A Nohr, Ken K Ong, Ben A Oostra, Colin N A Palmer, Aarno Palotie, John F Peden, Nancy Pedersen, Annette Peters, Ozren Polasek, Anneli Pouta, Peter P Pramstaller, Inga Prokopenko, Carolin Pütter, Aparna Radhakrishnan, Olli Raitakari, Augusto Rendon, Fernando Rivadeneira, Igor Rudan, Timo E Saaristo, Jennifer G Sambrook, Alan R Sanders, Serena Sanna, Jouko Saramies, Sabine Schipf, Stefan Schreiber, Heribert Schunkert, So-Youn Shin, Stefano Signorini, Juha Sinisalo, Boris Skrobek, Nicole Soranzo, Alena Stančáková, Klaus Stark, Jonathan C Stephens, Kathleen Stirrups, Ronald P Stolk, Michael Stumvoll, Amy J Swift, Eirini V Theodoraki, Barbara Thorand, David-Alexandre Tregouet, Elena Tremoli, Melanie M Van der Klauw, Joyce B J van Meurs, Sita H Vermeulen, Jorma Viikari, Jarmo Virtamo, Veronique Vitart, Gérard Waeber, Zhaoming Wang, Elisabeth Widén, Sarah H Wild, Gonneke Willemsen, Bernhard R Winkelmann, Jacqueline C M Witteman, Bruce H R Wolffenbuttel, Andrew Wong, Alan F Wright, M Carola Zillikens, Philippe Amouyel, Bernhard O Boehm, Eric Boerwinkle, Dorret I Boomsma, Mark J Caulfield, Stephen J Chanock, L Adrienne Cupples, Daniele Cusi, George V Dedoussis, Jeanette Erdmann, Johan G Eriksson, Paul W Franks, Philippe Froguel, Christian Gieger, Ulf Gyllensten, Anders Hamsten, Tamara B Harris, Christian Hengstenberg, Andrew A Hicks, Aroon Hingorani, Anke Hinney, Albert Hofman, Kees G Hovingh, Kristian Hveem, Thomas Illig, Marjo-Riitta Jarvelin, Karl-Heinz Jöckel, Sirkka M Keinanen-Kiukaanniemi, Lambertus A Kiemeney, Diana Kuh, Markku Laakso, Terho Lehtimäki, Douglas F Levinson, Nicholas G Martin, Andres Metspalu, Andrew D Morris, Markku S Nieminen, Inger Njølstad, Claes Ohlsson, Albertine J Oldehinkel, Willem H Ouwehand, Lyle J Palmer, Brenda Penninx, Chris Power, Michael A Province, Bruce M Psaty, Lu Qi, Rainer Rauramaa, Paul M Ridker, Samuli Ripatti, Veikko Salomaa, Nilesh J Samani, Harold Snieder, Thorkild I A Sørensen, Timothy D Spector, Kari Stefansson, Anke Tönjes, Jaakko Tuomilehto, André G Uitterlinden, Matti Uusitupa, Pim van der Harst, Peter Vollenweider, Henri Wallaschofski, Nicholas J Wareham, Hugh Watkins, H-Erich Wichmann, James F Wilson, Goncalo R Abecasis, Themistocles L Assimes, Inês Barroso, Michael Boehnke, Ingrid B Borecki, Panos Deloukas, Caroline S Fox, Timothy Frayling, Leif C Groop, Talin Haritunian, Iris M Heid, David Hunter, Robert C Kaplan, Fredrik Karpe, Miriam F Moffatt, Karen L Mohlke, Jeffrey R O'Connell, Yudi Pawitan, Eric E Schadt, David Schlessinger, Valgerdur Steinthorsdottir, David P Strachan, Unnur Thorsteinsdottir, Cornelia M van Duijn, Peter M Visscher, Anna Maria Di Blasio, Joel N Hirschhorn, Cecilia M Lindgren, Andrew P Morris, David Meyre, André Scherag, Mark I McCarthy, Elizabeth K Speliotes, Kari E North, Ruth J F Loos, Erik Ingelsson

ABSTRACT

Approaches exploiting trait distribution extremes may be used to identify loci associated with common traits, but it is unknown whether these loci are generalizable to the broader population. In a genome-wide search for loci associated with the upper versus the lower 5th percentiles of body mass index, height and waist-to-hip ratio, as well as clinical classes of obesity, including up to 263,407 individuals of European ancestry, we identified 4 new loci (IGFBP4, H6PD, RSRC1 and PPP2R2A) influencing height detected in the distribution tails and 7 new loci (HNF4G, RPTOR, GNAT2, MRPS33P4, ADCY9, HS6ST3 and ZZZ3) for clinical classes of obesity. Further, we find a large overlap in genetic structure and the distribution of variants between traits based on extremes and the general population and little etiological heterogeneity between obesity subgroups. More... »

PAGES

501-512

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  • Journal

    TITLE

    Nature Genetics

    ISSUE

    5

    VOLUME

    45

    Author Affiliations

  • National Institutes of Health
  • Karolinska Institute
  • University of Tartu
  • Wellcome Sanger Institute
  • Washington University in St. Louis
  • University of North Carolina at Chapel Hill
  • Amgen (United States)
  • Wellcome Centre for Human Genetics
  • Istituto Auxologico Italiano
  • University of Michigan–Ann Arbor
  • Harvard University
  • University Hospital Regensburg
  • University of Exeter
  • Emory University
  • University of Queensland
  • Massachusetts General Hospital
  • deCODE Genetics (Iceland)
  • QIMR Berghofer Medical Research Institute
  • Erasmus University Medical Center
  • University of Western Australia
  • VU University Medical Center
  • National Institute for Health and Welfare
  • VU University Amsterdam
  • Western General Hospital
  • Philipp University of Marburg
  • Uppsala University
  • Queen Mary University of London
  • Heidelberg University
  • University of Lübeck
  • Swiss Institute of Bioinformatics
  • Innsbruck Medical University
  • Délégation Nord, Pas-de-Calais et Picardie
  • University of Washington
  • King's College London
  • University of Bristol
  • Wageningen University & Research
  • Ludwig Maximilian University of Munich
  • Boston University
  • University Medical Center Groningen
  • University of Helsinki
  • Brigham and Women's Hospital
  • Umeå University
  • University of Iceland
  • University of Greifswald
  • Academic Medical Center
  • University of Cambridge
  • University of Gothenburg
  • HudsonAlpha Institute for Biotechnology
  • University Medical Center Utrecht
  • University of Eastern Finland
  • NIHR Cambridge Dementia Biomedical Research Unit
  • University of Leeds
  • National Human Genome Research Institute
  • University of Edinburgh
  • University of Glasgow
  • Imperial College London
  • Radboud University Nijmegen Medical Centre
  • Institute of Genetic and Biomedical Research
  • Harokopio University
  • University of Insubria
  • Hôpital Rangueil
  • University of Milan
  • NorthShore University HealthSystem
  • University of Oulu
  • Boston University School of Medicine
  • University of Duisburg-Essen
  • University College London
  • Kaiser Permanente
  • Leidos (United States)
  • Tampere University Hospital
  • United Kingdom Clinical Research Collaboration
  • University Hospital Ulm
  • Finnish Institute of Occupational Health
  • Kuopion Liikuntalääketieteen Tutkimuslaitos
  • Genome Institute of Singapore
  • Vita-Salute San Raffaele University
  • GlaxoSmithKline (United States)
  • University of Bonn
  • Sir Charles Gairdner Hospital
  • University of Oxford
  • Aarhus University
  • MRC Unit for Lifelong Health and Ageing
  • Leiden University Medical Center
  • Illumina (United Kingdom)
  • University of Split
  • Cambridge Centre
  • Turku University Hospital
  • Pirkanmaa Hospital District
  • South Karelia Central Hospital
  • Kiel University
  • German Heart Centre
  • Azienda Ospedaliera di Desio e Vimercate
  • Helsinki University Central Hospital
  • Leipzig University
  • Sorbonne University
  • University Hospital of Lausanne
  • The University of Texas Health Science Center at Houston
  • Fondazione Filarete
  • Norwegian University of Science and Technology
  • Hannover Medical School
  • Oulu University Hospital
  • University of Tampere
  • Stanford University
  • The Arctic University of Norway
  • Lunenfeld-Tanenbaum Research Institute
  • Group Health Cooperative
  • Kuopio University Hospital
  • Glenfield Hospital
  • University of Copenhagen
  • King Abdulaziz University
  • Klinikum der Universität München
  • National Heart Lung and Blood Institute
  • Lund University
  • Cedars-Sinai Medical Center
  • Helmholtz Zentrum München
  • Albert Einstein College of Medicine
  • Churchill Hospital
  • University of Maryland, Baltimore
  • Icahn School of Medicine at Mount Sinai
  • National Institute on Aging
  • McMaster University
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ng.2606

    DOI

    http://dx.doi.org/10.1038/ng.2606

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1049236324

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/23563607


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