Eukaryotes-Prokaryotes Divergence estimated by 5S Ribosomal RNA Sequences View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1973-06

AUTHORS

MOTOO KIMURA, TOMOKO OHTA

ABSTRACT

DATING the principal events in the history of life on the Earth is an interesting subject in evolutionary studies. Here we estimate the time of divergence of the eukaryotes and the prokaryotes through comparative studies of 5S ribosomal RNA sequences, coupled with those of cytochrome c. By prokaryotes we mean primitive forms having no true nucleus (bacteria and blue-green algae), while by eukaryotes we mean higher nucleated organisms such as plants and animals including yeasts and fungi. The principle we use in our estimation is that the rate of nucleotide substitutions in the course of evolution is constant per year per site for each informational macromole-cule as long as the structure and function of the molecule remain unaltered. More... »

PAGES

199

References to SciGraph publications

  • 1971-05. The oldest fossils. in SCIENTIFIC AMERICAN
  • 1972-03. On the stochastic model for estimation of mutational distance between homologous proteins in JOURNAL OF MOLECULAR EVOLUTION
  • 1971-03. The structure of cytochromec and the rates of molecular evolution in JOURNAL OF MOLECULAR EVOLUTION
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/newbio243199a0

    DOI

    http://dx.doi.org/10.1038/newbio243199a0

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1040485034

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/4197569


    Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
    Incoming Citations Browse incoming citations for this publication using opencitations.net

    JSON-LD is the canonical representation for SciGraph data.

    TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

    [
      {
        "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
        "about": [
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Genetics", 
            "type": "DefinedTerm"
          }, 
          {
            "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
            "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
            "name": "Biological Sciences", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Base Sequence", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Biological Evolution", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Escherichia coli", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Genetic Code", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Humans", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Models, Biological", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Mutation", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Nucleotides", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Pseudomonas fluorescens", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "RNA, Ribosomal", 
            "type": "DefinedTerm"
          }, 
          {
            "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
            "name": "Saccharomyces cerevisiae", 
            "type": "DefinedTerm"
          }
        ], 
        "author": [
          {
            "familyName": "KIMURA", 
            "givenName": "MOTOO", 
            "type": "Person"
          }, 
          {
            "familyName": "OHTA", 
            "givenName": "TOMOKO", 
            "type": "Person"
          }
        ], 
        "citation": [
          {
            "id": "https://doi.org/10.1016/0014-5793(72)80442-3", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1006485929"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/0014-5793(72)80563-5", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1015238332"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1016/b978-1-4832-3211-9.50009-7", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1016180325"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1097/00010694-196812000-00013", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1019961733"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1097/00010694-196812000-00013", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1019961733"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf01653945", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1024892741", 
              "https://doi.org/10.1007/bf01653945"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf01653945", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1024892741", 
              "https://doi.org/10.1007/bf01653945"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf01659392", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1035638159", 
              "https://doi.org/10.1007/bf01659392"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1007/bf01659392", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1035638159", 
              "https://doi.org/10.1007/bf01659392"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "sg:pub.10.1038/scientificamerican0571-30", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1056541966", 
              "https://doi.org/10.1038/scientificamerican0571-30"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://doi.org/10.1126/science.168.3938.1469", 
            "sameAs": [
              "https://app.dimensions.ai/details/publication/pub.1062500115"
            ], 
            "type": "CreativeWork"
          }, 
          {
            "id": "https://app.dimensions.ai/details/publication/pub.1081158275", 
            "type": "CreativeWork"
          }
        ], 
        "datePublished": "1973-06", 
        "datePublishedReg": "1973-06-01", 
        "description": "DATING the principal events in the history of life on the Earth is an interesting subject in evolutionary studies. Here we estimate the time of divergence of the eukaryotes and the prokaryotes through comparative studies of 5S ribosomal RNA sequences, coupled with those of cytochrome c. By prokaryotes we mean primitive forms having no true nucleus (bacteria and blue-green algae), while by eukaryotes we mean higher nucleated organisms such as plants and animals including yeasts and fungi. The principle we use in our estimation is that the rate of nucleotide substitutions in the course of evolution is constant per year per site for each informational macromole-cule as long as the structure and function of the molecule remain unaltered.", 
        "genre": "research_article", 
        "id": "sg:pub.10.1038/newbio243199a0", 
        "inLanguage": [
          "en"
        ], 
        "isAccessibleForFree": false, 
        "isPartOf": [
          {
            "id": "sg:journal.1018957", 
            "issn": [
              "0090-0028", 
              "1476-4687"
            ], 
            "name": "Nature", 
            "type": "Periodical"
          }, 
          {
            "issueNumber": "128", 
            "type": "PublicationIssue"
          }, 
          {
            "type": "PublicationVolume", 
            "volumeNumber": "243"
          }
        ], 
        "name": "Eukaryotes-Prokaryotes Divergence estimated by 5S Ribosomal RNA Sequences", 
        "pagination": "199", 
        "productId": [
          {
            "name": "readcube_id", 
            "type": "PropertyValue", 
            "value": [
              "c0dabef4ff22cd7e3e47be3561ebcee46c772494b342919f9d74d8d7c423ac86"
            ]
          }, 
          {
            "name": "pubmed_id", 
            "type": "PropertyValue", 
            "value": [
              "4197569"
            ]
          }, 
          {
            "name": "nlm_unique_id", 
            "type": "PropertyValue", 
            "value": [
              "0410463"
            ]
          }, 
          {
            "name": "doi", 
            "type": "PropertyValue", 
            "value": [
              "10.1038/newbio243199a0"
            ]
          }, 
          {
            "name": "dimensions_id", 
            "type": "PropertyValue", 
            "value": [
              "pub.1040485034"
            ]
          }
        ], 
        "sameAs": [
          "https://doi.org/10.1038/newbio243199a0", 
          "https://app.dimensions.ai/details/publication/pub.1040485034"
        ], 
        "sdDataset": "articles", 
        "sdDatePublished": "2019-04-11T12:44", 
        "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
        "sdPublisher": {
          "name": "Springer Nature - SN SciGraph project", 
          "type": "Organization"
        }, 
        "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000363_0000000363/records_70068_00000001.jsonl", 
        "type": "ScholarlyArticle", 
        "url": "https://www.nature.com/articles/newbio243199a0"
      }
    ]
     

    Download the RDF metadata as:  json-ld nt turtle xml License info

    HOW TO GET THIS DATA PROGRAMMATICALLY:

    JSON-LD is a popular format for linked data which is fully compatible with JSON.

    curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/newbio243199a0'

    N-Triples is a line-based linked data format ideal for batch operations.

    curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/newbio243199a0'

    Turtle is a human-readable linked data format.

    curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/newbio243199a0'

    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/newbio243199a0'


     

    This table displays all metadata directly associated to this object as RDF triples.

    142 TRIPLES      21 PREDICATES      49 URIs      32 LITERALS      20 BLANK NODES

    Subject Predicate Object
    1 sg:pub.10.1038/newbio243199a0 schema:about N2408082d69c9485e9f4ca17a1f29f667
    2 N29d42e3583814e87b057b3d6fd9a4fce
    3 N6875194272804cc38e8c4df8e0bbe470
    4 N6b74ef6d66a446d4b1222565ebce27e6
    5 N7711621ebf24419dac066641e778113c
    6 N9ac2d4f8bd524efe905328fc134c0a67
    7 Nae9ccf8a42ef4a1fbbba610b228fe4e0
    8 Naeb13f68b9b64140aaa6579d3532c624
    9 Nb3a83d0543d94c6f8b4c109321dec3a6
    10 Nb908f61b637d4e3bb8707193f83f53a9
    11 Nbb424febbd0644b9bbcfa7c2fd49e402
    12 anzsrc-for:06
    13 anzsrc-for:0604
    14 schema:author N597d2eeba80944f888306aa91e111f85
    15 schema:citation sg:pub.10.1007/bf01653945
    16 sg:pub.10.1007/bf01659392
    17 sg:pub.10.1038/scientificamerican0571-30
    18 https://app.dimensions.ai/details/publication/pub.1081158275
    19 https://doi.org/10.1016/0014-5793(72)80442-3
    20 https://doi.org/10.1016/0014-5793(72)80563-5
    21 https://doi.org/10.1016/b978-1-4832-3211-9.50009-7
    22 https://doi.org/10.1097/00010694-196812000-00013
    23 https://doi.org/10.1126/science.168.3938.1469
    24 schema:datePublished 1973-06
    25 schema:datePublishedReg 1973-06-01
    26 schema:description DATING the principal events in the history of life on the Earth is an interesting subject in evolutionary studies. Here we estimate the time of divergence of the eukaryotes and the prokaryotes through comparative studies of 5S ribosomal RNA sequences, coupled with those of cytochrome c. By prokaryotes we mean primitive forms having no true nucleus (bacteria and blue-green algae), while by eukaryotes we mean higher nucleated organisms such as plants and animals including yeasts and fungi. The principle we use in our estimation is that the rate of nucleotide substitutions in the course of evolution is constant per year per site for each informational macromole-cule as long as the structure and function of the molecule remain unaltered.
    27 schema:genre research_article
    28 schema:inLanguage en
    29 schema:isAccessibleForFree false
    30 schema:isPartOf N37cc2bf3871c4258a45b6babd08ad2d7
    31 N3fd3d40cf5ac4892b94c95ea2b06fec9
    32 sg:journal.1018957
    33 schema:name Eukaryotes-Prokaryotes Divergence estimated by 5S Ribosomal RNA Sequences
    34 schema:pagination 199
    35 schema:productId N267374dddc7048b0b12d2b7d04de6c47
    36 N4e948f40bec0437aaa0209ada3c05907
    37 N4eea478d1e6142f2b950d500c9a13a23
    38 N59a260f0996343ecab4b21ad4d19c8f0
    39 N667189913ca04e47a31315b18d595b53
    40 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040485034
    41 https://doi.org/10.1038/newbio243199a0
    42 schema:sdDatePublished 2019-04-11T12:44
    43 schema:sdLicense https://scigraph.springernature.com/explorer/license/
    44 schema:sdPublisher N3b85fc7446d14aa4ada3a1829e90710d
    45 schema:url https://www.nature.com/articles/newbio243199a0
    46 sgo:license sg:explorer/license/
    47 sgo:sdDataset articles
    48 rdf:type schema:ScholarlyArticle
    49 N091f0723d7f64c02833fe060ccbc6558 schema:familyName OHTA
    50 schema:givenName TOMOKO
    51 rdf:type schema:Person
    52 N2408082d69c9485e9f4ca17a1f29f667 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    53 schema:name Pseudomonas fluorescens
    54 rdf:type schema:DefinedTerm
    55 N267374dddc7048b0b12d2b7d04de6c47 schema:name dimensions_id
    56 schema:value pub.1040485034
    57 rdf:type schema:PropertyValue
    58 N29d42e3583814e87b057b3d6fd9a4fce schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    59 schema:name Biological Evolution
    60 rdf:type schema:DefinedTerm
    61 N37cc2bf3871c4258a45b6babd08ad2d7 schema:issueNumber 128
    62 rdf:type schema:PublicationIssue
    63 N3b85fc7446d14aa4ada3a1829e90710d schema:name Springer Nature - SN SciGraph project
    64 rdf:type schema:Organization
    65 N3fd3d40cf5ac4892b94c95ea2b06fec9 schema:volumeNumber 243
    66 rdf:type schema:PublicationVolume
    67 N4e948f40bec0437aaa0209ada3c05907 schema:name pubmed_id
    68 schema:value 4197569
    69 rdf:type schema:PropertyValue
    70 N4eea478d1e6142f2b950d500c9a13a23 schema:name nlm_unique_id
    71 schema:value 0410463
    72 rdf:type schema:PropertyValue
    73 N597d2eeba80944f888306aa91e111f85 rdf:first N5f9aa1bf0cca4a1ea771b60df756beb2
    74 rdf:rest Nc1ac185580324ff0800f833fbbdb4c20
    75 N59a260f0996343ecab4b21ad4d19c8f0 schema:name doi
    76 schema:value 10.1038/newbio243199a0
    77 rdf:type schema:PropertyValue
    78 N5f9aa1bf0cca4a1ea771b60df756beb2 schema:familyName KIMURA
    79 schema:givenName MOTOO
    80 rdf:type schema:Person
    81 N667189913ca04e47a31315b18d595b53 schema:name readcube_id
    82 schema:value c0dabef4ff22cd7e3e47be3561ebcee46c772494b342919f9d74d8d7c423ac86
    83 rdf:type schema:PropertyValue
    84 N6875194272804cc38e8c4df8e0bbe470 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    85 schema:name Mutation
    86 rdf:type schema:DefinedTerm
    87 N6b74ef6d66a446d4b1222565ebce27e6 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    88 schema:name RNA, Ribosomal
    89 rdf:type schema:DefinedTerm
    90 N7711621ebf24419dac066641e778113c schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    91 schema:name Models, Biological
    92 rdf:type schema:DefinedTerm
    93 N9ac2d4f8bd524efe905328fc134c0a67 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    94 schema:name Base Sequence
    95 rdf:type schema:DefinedTerm
    96 Nae9ccf8a42ef4a1fbbba610b228fe4e0 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    97 schema:name Escherichia coli
    98 rdf:type schema:DefinedTerm
    99 Naeb13f68b9b64140aaa6579d3532c624 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    100 schema:name Saccharomyces cerevisiae
    101 rdf:type schema:DefinedTerm
    102 Nb3a83d0543d94c6f8b4c109321dec3a6 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    103 schema:name Nucleotides
    104 rdf:type schema:DefinedTerm
    105 Nb908f61b637d4e3bb8707193f83f53a9 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    106 schema:name Genetic Code
    107 rdf:type schema:DefinedTerm
    108 Nbb424febbd0644b9bbcfa7c2fd49e402 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
    109 schema:name Humans
    110 rdf:type schema:DefinedTerm
    111 Nc1ac185580324ff0800f833fbbdb4c20 rdf:first N091f0723d7f64c02833fe060ccbc6558
    112 rdf:rest rdf:nil
    113 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
    114 schema:name Biological Sciences
    115 rdf:type schema:DefinedTerm
    116 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
    117 schema:name Genetics
    118 rdf:type schema:DefinedTerm
    119 sg:journal.1018957 schema:issn 0090-0028
    120 1476-4687
    121 schema:name Nature
    122 rdf:type schema:Periodical
    123 sg:pub.10.1007/bf01653945 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024892741
    124 https://doi.org/10.1007/bf01653945
    125 rdf:type schema:CreativeWork
    126 sg:pub.10.1007/bf01659392 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035638159
    127 https://doi.org/10.1007/bf01659392
    128 rdf:type schema:CreativeWork
    129 sg:pub.10.1038/scientificamerican0571-30 schema:sameAs https://app.dimensions.ai/details/publication/pub.1056541966
    130 https://doi.org/10.1038/scientificamerican0571-30
    131 rdf:type schema:CreativeWork
    132 https://app.dimensions.ai/details/publication/pub.1081158275 schema:CreativeWork
    133 https://doi.org/10.1016/0014-5793(72)80442-3 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006485929
    134 rdf:type schema:CreativeWork
    135 https://doi.org/10.1016/0014-5793(72)80563-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015238332
    136 rdf:type schema:CreativeWork
    137 https://doi.org/10.1016/b978-1-4832-3211-9.50009-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1016180325
    138 rdf:type schema:CreativeWork
    139 https://doi.org/10.1097/00010694-196812000-00013 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019961733
    140 rdf:type schema:CreativeWork
    141 https://doi.org/10.1126/science.168.3938.1469 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062500115
    142 rdf:type schema:CreativeWork
     




    Preview window. Press ESC to close (or click here)


    ...