Human gut microbiota community structures in urban and rural populations in Russia View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2013-09-16

AUTHORS

Alexander V. Tyakht, Elena S. Kostryukova, Anna S. Popenko, Maxim S. Belenikin, Alexander V. Pavlenko, Andrey K. Larin, Irina Y. Karpova, Oksana V. Selezneva, Tatyana A. Semashko, Elena A. Ospanova, Vladislav V. Babenko, Igor V. Maev, Sergey V. Cheremushkin, Yuriy A. Kucheryavyy, Petr L. Shcherbakov, Vladimir B. Grinevich, Oleg I. Efimov, Evgenii I. Sas, Rustam A. Abdulkhakov, Sayar R. Abdulkhakov, Elena A. Lyalyukova, Maria A. Livzan, Valentin V. Vlassov, Renad Z. Sagdeev, Vladislav V. Tsukanov, Marina F. Osipenko, Irina V. Kozlova, Alexander V. Tkachev, Valery I. Sergienko, Dmitry G. Alexeev, Vadim M. Govorun

ABSTRACT

The microbial community of the human gut has a crucial role in sustaining host homeostasis. High-throughput DNA sequencing has delineated the structural and functional configurations of gut metagenomes in world populations. The microbiota of the Russian population is of particular interest to researchers, because Russia encompasses a uniquely wide range of environmental conditions and ethnogeographical cohorts. Here we conduct a shotgun metagenomic analysis of gut microbiota samples from 96 healthy Russian adult subjects, which reveals novel microbial community structures. The communities from several rural regions display similarities within each region and are dominated by the bacterial taxa associated with the healthy gut. Functional analysis shows that the metabolic pathways exhibiting differential abundance in the novel types are primarily associated with the trade-off between the Bacteroidetes and Firmicutes phyla. The specific signatures of the Russian gut microbiota are likely linked to the host diet, cultural habits and socioeconomic status. More... »

PAGES

2469

References to SciGraph publications

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  • Journal

    TITLE

    Nature Communications

    ISSUE

    1

    VOLUME

    4

    Author Affiliations

  • Research Institute of Physico-Chemical Medicine, Malaya Pirogovskaya 1a, Moscow 119435, Russia
  • Department of Internal Diseases Propedeutics and Gastroenterology, Moscow State University of Medicine and Dentistry, Delegatskaya 20-1, Moscow 127473, Russia
  • Central Scientific Institute of Gastroenterology, Shosse Entuziastov 86, Moscow 111123, Russia
  • Kirov Military Medical Academy, Lebedeva 6, Saint Petersburg 194175, Russia
  • Department of Hospital Therapy, Kazan’ State Medical University, Butlerova 49, Kazan’ 420012, Russia
  • Department of Human Anatomy, Kazan' (Volga Region) Federal University, Kremlyovskaya 18, Kazan' 420008, Russia
  • Omsk State Medical Academy, Lenina 12, Omsk 644043, Russia
  • Institute of Chemical Biology and Fundamental Medicine of the Siberian Branch of the Russian Academy of Sciences, Prospekt Akademika Lavrent'eva 8, Novosibirsk 630090, Russia
  • International Tomography Center of the Siberian Branch of the Russian Academy of Sciences, Institutskaya 3A, Novosibirsk 630090, Russia
  • Scientific Research Institute of Medical Problems of the North, Partizana Zhelezniaka 3G, Krasnoyarsk 660022, Russia
  • Department of Internal Diseases Propedeutics, Novosibirsk State Medical University, Krasny Prospect 52, Novosibirsk 630091, Russia
  • Department of Therapy, Saratov State Medical University, Bolshaya Kazachia 112, Saratov 410012, Russia
  • Department of Internal Diseases Propedeutics, Rostov State Medical University, Suvorova 118/50, Rostov-on-Don 344022, Russia
  • Moscow Institute of Physics and Technology, Institutskii Per. 9, Moscow Region, Dolgoprudny 141700, Russia
  • Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, GSP-7, Miklukho-Maklaya 16/10, Moscow 117997, Russia
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ncomms3469

    DOI

    http://dx.doi.org/10.1038/ncomms3469

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1020010565

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/24036685


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