Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2013-08-27

AUTHORS

Cindy J. Castelle, Laura A. Hug, Kelly C. Wrighton, Brian C. Thomas, Kenneth H. Williams, Dongying Wu, Susannah G. Tringe, Steven W. Singer, Jonathan A. Eisen, Jillian F. Banfield

ABSTRACT

Microorganisms in the subsurface represent a substantial but poorly understood component of the Earth's biosphere. Subsurface environments are complex and difficult to characterize; thus, their microbiota have remained as a 'dark matter' of the carbon and other biogeochemical cycles. Here we deeply sequence two sediment-hosted microbial communities from an aquifer adjacent to the Colorado River, CO, USA. No single organism represents more than ~1% of either community. Remarkably, many bacteria and archaea in these communities are novel at the phylum level or belong to phyla lacking a sequenced representative. The dominant organism in deeper sediment, RBG-1, is a member of a new phylum. On the basis of its reconstructed complete genome, RBG-1 is metabolically versatile. Its wide respiration-based repertoire may enable it to respond to the fluctuating redox environment close to the water table. We document extraordinary microbial novelty and the importance of previously unknown lineages in sediment biogeochemical transformations. More... »

PAGES

2120

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/ncomms3120

DOI

http://dx.doi.org/10.1038/ncomms3120

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1002664779

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/23979677


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