Structured patterns in geographic variability of metabolic phenotypes in Arabidopsis thaliana View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2012-01

AUTHORS

Sabrina Kleessen, Carla Antonio, Ronan Sulpice, Roosa Laitinen, Alisdair R. Fernie, Mark Stitt, Zoran Nikoloski

ABSTRACT

Understanding molecular factors determining local adaptation is a key challenge, particularly relevant for plants, which are sessile organisms coping with a continuously fluctuating environment. Here we introduce a rigorous network-based approach for investigating the relation between geographic location of accessions and heterogeneous molecular phenotypes. We demonstrate for Arabidopsis accessions that not only genotypic variability but also flowering and metabolic phenotypes show a robust pattern of isolation-by-distance. Our approach opens new avenues to investigate relations between geographic origin and heterogeneous molecular phenotypes, like metabolite profiles, which can easily be obtained in species where genome data is not yet available. More... »

PAGES

1319

Identifiers

URI

http://scigraph.springernature.com/pub.10.1038/ncomms2333

DOI

http://dx.doi.org/10.1038/ncomms2333

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1028641259

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/23271653


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Arabidopsis", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Biodiversity", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Europe", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genotype", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Geography", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Phenotype", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "name": [
            "Systems Biology and Mathematical Modeling Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Kleessen", 
        "givenName": "Sabrina", 
        "id": "sg:person.01013151753.80", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01013151753.80"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Central Metabolism Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Antonio", 
        "givenName": "Carla", 
        "id": "sg:person.0642065125.99", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0642065125.99"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "National University of Ireland, Galway", 
          "id": "https://www.grid.ac/institutes/grid.6142.1", 
          "name": [
            "System Regulation Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany", 
            "NUIG, Plant Systems Biology Lab, Plant and AgriBiosciences Research Centre, Botany and Plant Science, Galway, Ireland"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Sulpice", 
        "givenName": "Ronan", 
        "id": "sg:person.01026406314.59", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01026406314.59"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Molecular Mechanisms of Adaptation Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Laitinen", 
        "givenName": "Roosa", 
        "id": "sg:person.01337200545.98", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01337200545.98"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Central Metabolism Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Fernie", 
        "givenName": "Alisdair R.", 
        "id": "sg:person.01021163534.25", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021163534.25"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "System Regulation Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Stitt", 
        "givenName": "Mark", 
        "id": "sg:person.01021103304.09", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021103304.09"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "name": [
            "Systems Biology and Mathematical Modeling Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Nikoloski", 
        "givenName": "Zoran", 
        "id": "sg:person.01130757057.58", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01130757057.58"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1111/j.1365-3040.2008.01921.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004035398"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1538-4632.1995.tb00338.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005958961"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1538-4632.1995.tb00338.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005958961"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/s1360-1385(97)01159-x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007082699"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-3040.2010.02155.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007818137"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-3040.2010.02155.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007818137"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/ng.911", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007997464", 
          "https://doi.org/10.1038/ng.911"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1104/pp.111.189845", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010074351"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1534/genetics.108.089581", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012826185"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1534/genetics.108.089581", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012826185"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-294x.2007.03615.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013919040"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-294x.2007.03615.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1013919040"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1538-4632.1992.tb00261.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019625466"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1538-4632.1992.tb00261.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019625466"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.arplant.55.031903.141605", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020810008"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-313x.2010.04124.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021137784"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-313x.2010.04124.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021137784"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.trac.2009.11.008", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022019550"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pone.0001705", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022208383"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1558-5646.2007.00189.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023005317"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.pbi.2012.03.016", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023539060"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/aob/mcl281", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023841050"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pbio.0030196", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024152647"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pbio.0030196", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1024152647"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1023/a:1010329902165", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025050941", 
          "https://doi.org/10.1023/a:1010329902165"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0031-3203(80)90066-7", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025755637"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0031-3203(80)90066-7", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025755637"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/jxb/err244", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026580125"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/ng.1033", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027256894", 
          "https://doi.org/10.1038/ng.1033"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pgen.0010060", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030010272"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1469-8137.1994.tb02969.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031675654"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-313x.2011.04606.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1037617179"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-3040.2007.01708.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038387846"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0609709104", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040189436"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature08800", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040364881", 
          "https://doi.org/10.1038/nature08800"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature08800", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040364881", 
          "https://doi.org/10.1038/nature08800"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/aob/mcq028", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041598759"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-3040.2009.01965.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043263303"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1371/journal.pgen.1000843", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043849482"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/ng.1042", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044562954", 
          "https://doi.org/10.1038/ng.1042"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.pbi.2011.03.024", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045091031"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1105/tpc.110.076653", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045431036"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.0903478106", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045934715"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nbt1192", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046100112", 
          "https://doi.org/10.1038/nbt1192"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nbt1192", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1046100112", 
          "https://doi.org/10.1038/nbt1192"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1538-4632.1980.tb00031.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050719753"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1538-4632.1980.tb00031.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050719753"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.csda.2008.10.010", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051022994"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1365-313x.2008.03443.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051356527"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1021/jf058058q", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1055904800"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1021/jf058058q", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1055904800"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1021/jf204361d", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1055910671"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/biomet/37.1-2.17", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1059416116"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1138632", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062455229"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1209244", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062464938"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1209271", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062464939"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.18637/jss.v022.i07", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1068672329"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2332142", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1069893800"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1081518966", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2986645", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1102727915"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2986645", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1102727915"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2012-01", 
    "datePublishedReg": "2012-01-01", 
    "description": "Understanding molecular factors determining local adaptation is a key challenge, particularly relevant for plants, which are sessile organisms coping with a continuously fluctuating environment. Here we introduce a rigorous network-based approach for investigating the relation between geographic location of accessions and heterogeneous molecular phenotypes. We demonstrate for Arabidopsis accessions that not only genotypic variability but also flowering and metabolic phenotypes show a robust pattern of isolation-by-distance. Our approach opens new avenues to investigate relations between geographic origin and heterogeneous molecular phenotypes, like metabolite profiles, which can easily be obtained in species where genome data is not yet available.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1038/ncomms2333", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": true, 
    "isPartOf": [
      {
        "id": "sg:journal.1043282", 
        "issn": [
          "2041-1723"
        ], 
        "name": "Nature Communications", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "3"
      }
    ], 
    "name": "Structured patterns in geographic variability of metabolic phenotypes in Arabidopsis thaliana", 
    "pagination": "1319", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "8870114a4bc8a71cd6a136ce5ffeb8735024bc3ee86646d6eaf02ce04523352f"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "23271653"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "101528555"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1038/ncomms2333"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1028641259"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1038/ncomms2333", 
      "https://app.dimensions.ai/details/publication/pub.1028641259"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-10T21:26", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8687_00000437.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://www.nature.com/articles/ncomms2333"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1038/ncomms2333'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1038/ncomms2333'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1038/ncomms2333'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1038/ncomms2333'


 

This table displays all metadata directly associated to this object as RDF triples.

296 TRIPLES      21 PREDICATES      83 URIs      27 LITERALS      15 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1038/ncomms2333 schema:about N02b5db06bda647ea929906d00108253b
2 N10ca4ceb74af4d4280fdec2b6b1b0097
3 N3e9af20f4fe4483c8525bd3b5d5fca50
4 N7ba3571a9d644172bb565527e842f148
5 Nce1c88feb82f4bd5a20366c94f1a8832
6 Ned375f4e33a2475fad31c2c740d85bae
7 anzsrc-for:06
8 anzsrc-for:0604
9 schema:author Nb23e949164cb4330b8aab75ee39072de
10 schema:citation sg:pub.10.1023/a:1010329902165
11 sg:pub.10.1038/nature08800
12 sg:pub.10.1038/nbt1192
13 sg:pub.10.1038/ng.1033
14 sg:pub.10.1038/ng.1042
15 sg:pub.10.1038/ng.911
16 https://app.dimensions.ai/details/publication/pub.1081518966
17 https://doi.org/10.1016/0031-3203(80)90066-7
18 https://doi.org/10.1016/j.csda.2008.10.010
19 https://doi.org/10.1016/j.pbi.2011.03.024
20 https://doi.org/10.1016/j.pbi.2012.03.016
21 https://doi.org/10.1016/j.trac.2009.11.008
22 https://doi.org/10.1016/s1360-1385(97)01159-x
23 https://doi.org/10.1021/jf058058q
24 https://doi.org/10.1021/jf204361d
25 https://doi.org/10.1073/pnas.0609709104
26 https://doi.org/10.1073/pnas.0903478106
27 https://doi.org/10.1093/aob/mcl281
28 https://doi.org/10.1093/aob/mcq028
29 https://doi.org/10.1093/biomet/37.1-2.17
30 https://doi.org/10.1093/jxb/err244
31 https://doi.org/10.1104/pp.111.189845
32 https://doi.org/10.1105/tpc.110.076653
33 https://doi.org/10.1111/j.1365-294x.2007.03615.x
34 https://doi.org/10.1111/j.1365-3040.2007.01708.x
35 https://doi.org/10.1111/j.1365-3040.2008.01921.x
36 https://doi.org/10.1111/j.1365-3040.2009.01965.x
37 https://doi.org/10.1111/j.1365-3040.2010.02155.x
38 https://doi.org/10.1111/j.1365-313x.2008.03443.x
39 https://doi.org/10.1111/j.1365-313x.2010.04124.x
40 https://doi.org/10.1111/j.1365-313x.2011.04606.x
41 https://doi.org/10.1111/j.1469-8137.1994.tb02969.x
42 https://doi.org/10.1111/j.1538-4632.1980.tb00031.x
43 https://doi.org/10.1111/j.1538-4632.1992.tb00261.x
44 https://doi.org/10.1111/j.1538-4632.1995.tb00338.x
45 https://doi.org/10.1111/j.1558-5646.2007.00189.x
46 https://doi.org/10.1126/science.1138632
47 https://doi.org/10.1126/science.1209244
48 https://doi.org/10.1126/science.1209271
49 https://doi.org/10.1146/annurev.arplant.55.031903.141605
50 https://doi.org/10.1371/journal.pbio.0030196
51 https://doi.org/10.1371/journal.pgen.0010060
52 https://doi.org/10.1371/journal.pgen.1000843
53 https://doi.org/10.1371/journal.pone.0001705
54 https://doi.org/10.1534/genetics.108.089581
55 https://doi.org/10.18637/jss.v022.i07
56 https://doi.org/10.2307/2332142
57 https://doi.org/10.2307/2986645
58 schema:datePublished 2012-01
59 schema:datePublishedReg 2012-01-01
60 schema:description Understanding molecular factors determining local adaptation is a key challenge, particularly relevant for plants, which are sessile organisms coping with a continuously fluctuating environment. Here we introduce a rigorous network-based approach for investigating the relation between geographic location of accessions and heterogeneous molecular phenotypes. We demonstrate for Arabidopsis accessions that not only genotypic variability but also flowering and metabolic phenotypes show a robust pattern of isolation-by-distance. Our approach opens new avenues to investigate relations between geographic origin and heterogeneous molecular phenotypes, like metabolite profiles, which can easily be obtained in species where genome data is not yet available.
61 schema:genre research_article
62 schema:inLanguage en
63 schema:isAccessibleForFree true
64 schema:isPartOf N04822efb82c74b6f8c2889615df8bc7f
65 N35f3a445d28347c7a472eed8fa9dea2b
66 sg:journal.1043282
67 schema:name Structured patterns in geographic variability of metabolic phenotypes in Arabidopsis thaliana
68 schema:pagination 1319
69 schema:productId N31555e2dcabe4a279b87b1536ea9bfd1
70 N33d2a7242ca64823b84f96bd91c39118
71 N89d04fea2375450aaf9cf387e5e09c22
72 Nabf8794a9395420a922351ba523f5cf8
73 Nb8457078c28943c78df939f74bea37fa
74 schema:sameAs https://app.dimensions.ai/details/publication/pub.1028641259
75 https://doi.org/10.1038/ncomms2333
76 schema:sdDatePublished 2019-04-10T21:26
77 schema:sdLicense https://scigraph.springernature.com/explorer/license/
78 schema:sdPublisher Nff14efe9ac9b41729baab8a8d93b5a99
79 schema:url https://www.nature.com/articles/ncomms2333
80 sgo:license sg:explorer/license/
81 sgo:sdDataset articles
82 rdf:type schema:ScholarlyArticle
83 N0085a16cf0c747beadb64e06aa5aab32 rdf:first sg:person.0642065125.99
84 rdf:rest Nfb65e35fc23f481794d8c70d6dbb2687
85 N02b5db06bda647ea929906d00108253b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
86 schema:name Biodiversity
87 rdf:type schema:DefinedTerm
88 N04822efb82c74b6f8c2889615df8bc7f schema:issueNumber 1
89 rdf:type schema:PublicationIssue
90 N10ca4ceb74af4d4280fdec2b6b1b0097 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
91 schema:name Europe
92 rdf:type schema:DefinedTerm
93 N31555e2dcabe4a279b87b1536ea9bfd1 schema:name pubmed_id
94 schema:value 23271653
95 rdf:type schema:PropertyValue
96 N33d2a7242ca64823b84f96bd91c39118 schema:name nlm_unique_id
97 schema:value 101528555
98 rdf:type schema:PropertyValue
99 N35f3a445d28347c7a472eed8fa9dea2b schema:volumeNumber 3
100 rdf:type schema:PublicationVolume
101 N3d1336c771494f238479ae2a34bf8818 rdf:first sg:person.01021163534.25
102 rdf:rest N84ccc6ed62c3425bbbaa643193979ba4
103 N3d48e4e9e82b42a5b1b37aff1bf105ad rdf:first sg:person.01337200545.98
104 rdf:rest N3d1336c771494f238479ae2a34bf8818
105 N3e9af20f4fe4483c8525bd3b5d5fca50 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
106 schema:name Genotype
107 rdf:type schema:DefinedTerm
108 N45dfd8aae8d34a568f37e44e6a053391 schema:name Molecular Mechanisms of Adaptation Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany
109 rdf:type schema:Organization
110 N50ddd4c5ba3d459a83ba31ae1bd6d38d rdf:first sg:person.01130757057.58
111 rdf:rest rdf:nil
112 N5853f0683e5a43779e2f4d82be58682a schema:name Central Metabolism Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany
113 rdf:type schema:Organization
114 N5b546bb8d2324f249ef5724bd6faac86 schema:name Systems Biology and Mathematical Modeling Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany
115 rdf:type schema:Organization
116 N62e424802e1d43d3905979dfaa00f80f schema:name System Regulation Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany
117 rdf:type schema:Organization
118 N6b698f745f004f11ba9033c09037a8ff schema:name Systems Biology and Mathematical Modeling Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany
119 rdf:type schema:Organization
120 N7ba3571a9d644172bb565527e842f148 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
121 schema:name Arabidopsis
122 rdf:type schema:DefinedTerm
123 N84ccc6ed62c3425bbbaa643193979ba4 rdf:first sg:person.01021103304.09
124 rdf:rest N50ddd4c5ba3d459a83ba31ae1bd6d38d
125 N89d04fea2375450aaf9cf387e5e09c22 schema:name dimensions_id
126 schema:value pub.1028641259
127 rdf:type schema:PropertyValue
128 Nabf8794a9395420a922351ba523f5cf8 schema:name doi
129 schema:value 10.1038/ncomms2333
130 rdf:type schema:PropertyValue
131 Nb23e949164cb4330b8aab75ee39072de rdf:first sg:person.01013151753.80
132 rdf:rest N0085a16cf0c747beadb64e06aa5aab32
133 Nb8457078c28943c78df939f74bea37fa schema:name readcube_id
134 schema:value 8870114a4bc8a71cd6a136ce5ffeb8735024bc3ee86646d6eaf02ce04523352f
135 rdf:type schema:PropertyValue
136 Nce1c88feb82f4bd5a20366c94f1a8832 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
137 schema:name Phenotype
138 rdf:type schema:DefinedTerm
139 Ned375f4e33a2475fad31c2c740d85bae schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
140 schema:name Geography
141 rdf:type schema:DefinedTerm
142 Neea15fda8f214f7ca2e911854ee8fb2d schema:name Central Metabolism Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany
143 rdf:type schema:Organization
144 Nfb65e35fc23f481794d8c70d6dbb2687 rdf:first sg:person.01026406314.59
145 rdf:rest N3d48e4e9e82b42a5b1b37aff1bf105ad
146 Nff14efe9ac9b41729baab8a8d93b5a99 schema:name Springer Nature - SN SciGraph project
147 rdf:type schema:Organization
148 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
149 schema:name Biological Sciences
150 rdf:type schema:DefinedTerm
151 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
152 schema:name Genetics
153 rdf:type schema:DefinedTerm
154 sg:journal.1043282 schema:issn 2041-1723
155 schema:name Nature Communications
156 rdf:type schema:Periodical
157 sg:person.01013151753.80 schema:affiliation N5b546bb8d2324f249ef5724bd6faac86
158 schema:familyName Kleessen
159 schema:givenName Sabrina
160 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01013151753.80
161 rdf:type schema:Person
162 sg:person.01021103304.09 schema:affiliation N62e424802e1d43d3905979dfaa00f80f
163 schema:familyName Stitt
164 schema:givenName Mark
165 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021103304.09
166 rdf:type schema:Person
167 sg:person.01021163534.25 schema:affiliation N5853f0683e5a43779e2f4d82be58682a
168 schema:familyName Fernie
169 schema:givenName Alisdair R.
170 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01021163534.25
171 rdf:type schema:Person
172 sg:person.01026406314.59 schema:affiliation https://www.grid.ac/institutes/grid.6142.1
173 schema:familyName Sulpice
174 schema:givenName Ronan
175 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01026406314.59
176 rdf:type schema:Person
177 sg:person.01130757057.58 schema:affiliation N6b698f745f004f11ba9033c09037a8ff
178 schema:familyName Nikoloski
179 schema:givenName Zoran
180 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01130757057.58
181 rdf:type schema:Person
182 sg:person.01337200545.98 schema:affiliation N45dfd8aae8d34a568f37e44e6a053391
183 schema:familyName Laitinen
184 schema:givenName Roosa
185 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01337200545.98
186 rdf:type schema:Person
187 sg:person.0642065125.99 schema:affiliation Neea15fda8f214f7ca2e911854ee8fb2d
188 schema:familyName Antonio
189 schema:givenName Carla
190 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0642065125.99
191 rdf:type schema:Person
192 sg:pub.10.1023/a:1010329902165 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025050941
193 https://doi.org/10.1023/a:1010329902165
194 rdf:type schema:CreativeWork
195 sg:pub.10.1038/nature08800 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040364881
196 https://doi.org/10.1038/nature08800
197 rdf:type schema:CreativeWork
198 sg:pub.10.1038/nbt1192 schema:sameAs https://app.dimensions.ai/details/publication/pub.1046100112
199 https://doi.org/10.1038/nbt1192
200 rdf:type schema:CreativeWork
201 sg:pub.10.1038/ng.1033 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027256894
202 https://doi.org/10.1038/ng.1033
203 rdf:type schema:CreativeWork
204 sg:pub.10.1038/ng.1042 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044562954
205 https://doi.org/10.1038/ng.1042
206 rdf:type schema:CreativeWork
207 sg:pub.10.1038/ng.911 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007997464
208 https://doi.org/10.1038/ng.911
209 rdf:type schema:CreativeWork
210 https://app.dimensions.ai/details/publication/pub.1081518966 schema:CreativeWork
211 https://doi.org/10.1016/0031-3203(80)90066-7 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025755637
212 rdf:type schema:CreativeWork
213 https://doi.org/10.1016/j.csda.2008.10.010 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051022994
214 rdf:type schema:CreativeWork
215 https://doi.org/10.1016/j.pbi.2011.03.024 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045091031
216 rdf:type schema:CreativeWork
217 https://doi.org/10.1016/j.pbi.2012.03.016 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023539060
218 rdf:type schema:CreativeWork
219 https://doi.org/10.1016/j.trac.2009.11.008 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022019550
220 rdf:type schema:CreativeWork
221 https://doi.org/10.1016/s1360-1385(97)01159-x schema:sameAs https://app.dimensions.ai/details/publication/pub.1007082699
222 rdf:type schema:CreativeWork
223 https://doi.org/10.1021/jf058058q schema:sameAs https://app.dimensions.ai/details/publication/pub.1055904800
224 rdf:type schema:CreativeWork
225 https://doi.org/10.1021/jf204361d schema:sameAs https://app.dimensions.ai/details/publication/pub.1055910671
226 rdf:type schema:CreativeWork
227 https://doi.org/10.1073/pnas.0609709104 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040189436
228 rdf:type schema:CreativeWork
229 https://doi.org/10.1073/pnas.0903478106 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045934715
230 rdf:type schema:CreativeWork
231 https://doi.org/10.1093/aob/mcl281 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023841050
232 rdf:type schema:CreativeWork
233 https://doi.org/10.1093/aob/mcq028 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041598759
234 rdf:type schema:CreativeWork
235 https://doi.org/10.1093/biomet/37.1-2.17 schema:sameAs https://app.dimensions.ai/details/publication/pub.1059416116
236 rdf:type schema:CreativeWork
237 https://doi.org/10.1093/jxb/err244 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026580125
238 rdf:type schema:CreativeWork
239 https://doi.org/10.1104/pp.111.189845 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010074351
240 rdf:type schema:CreativeWork
241 https://doi.org/10.1105/tpc.110.076653 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045431036
242 rdf:type schema:CreativeWork
243 https://doi.org/10.1111/j.1365-294x.2007.03615.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1013919040
244 rdf:type schema:CreativeWork
245 https://doi.org/10.1111/j.1365-3040.2007.01708.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1038387846
246 rdf:type schema:CreativeWork
247 https://doi.org/10.1111/j.1365-3040.2008.01921.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1004035398
248 rdf:type schema:CreativeWork
249 https://doi.org/10.1111/j.1365-3040.2009.01965.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1043263303
250 rdf:type schema:CreativeWork
251 https://doi.org/10.1111/j.1365-3040.2010.02155.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1007818137
252 rdf:type schema:CreativeWork
253 https://doi.org/10.1111/j.1365-313x.2008.03443.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1051356527
254 rdf:type schema:CreativeWork
255 https://doi.org/10.1111/j.1365-313x.2010.04124.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1021137784
256 rdf:type schema:CreativeWork
257 https://doi.org/10.1111/j.1365-313x.2011.04606.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1037617179
258 rdf:type schema:CreativeWork
259 https://doi.org/10.1111/j.1469-8137.1994.tb02969.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1031675654
260 rdf:type schema:CreativeWork
261 https://doi.org/10.1111/j.1538-4632.1980.tb00031.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1050719753
262 rdf:type schema:CreativeWork
263 https://doi.org/10.1111/j.1538-4632.1992.tb00261.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1019625466
264 rdf:type schema:CreativeWork
265 https://doi.org/10.1111/j.1538-4632.1995.tb00338.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1005958961
266 rdf:type schema:CreativeWork
267 https://doi.org/10.1111/j.1558-5646.2007.00189.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1023005317
268 rdf:type schema:CreativeWork
269 https://doi.org/10.1126/science.1138632 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062455229
270 rdf:type schema:CreativeWork
271 https://doi.org/10.1126/science.1209244 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062464938
272 rdf:type schema:CreativeWork
273 https://doi.org/10.1126/science.1209271 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062464939
274 rdf:type schema:CreativeWork
275 https://doi.org/10.1146/annurev.arplant.55.031903.141605 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020810008
276 rdf:type schema:CreativeWork
277 https://doi.org/10.1371/journal.pbio.0030196 schema:sameAs https://app.dimensions.ai/details/publication/pub.1024152647
278 rdf:type schema:CreativeWork
279 https://doi.org/10.1371/journal.pgen.0010060 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030010272
280 rdf:type schema:CreativeWork
281 https://doi.org/10.1371/journal.pgen.1000843 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043849482
282 rdf:type schema:CreativeWork
283 https://doi.org/10.1371/journal.pone.0001705 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022208383
284 rdf:type schema:CreativeWork
285 https://doi.org/10.1534/genetics.108.089581 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012826185
286 rdf:type schema:CreativeWork
287 https://doi.org/10.18637/jss.v022.i07 schema:sameAs https://app.dimensions.ai/details/publication/pub.1068672329
288 rdf:type schema:CreativeWork
289 https://doi.org/10.2307/2332142 schema:sameAs https://app.dimensions.ai/details/publication/pub.1069893800
290 rdf:type schema:CreativeWork
291 https://doi.org/10.2307/2986645 schema:sameAs https://app.dimensions.ai/details/publication/pub.1102727915
292 rdf:type schema:CreativeWork
293 https://www.grid.ac/institutes/grid.6142.1 schema:alternateName National University of Ireland, Galway
294 schema:name NUIG, Plant Systems Biology Lab, Plant and AgriBiosciences Research Centre, Botany and Plant Science, Galway, Ireland
295 System Regulation Group, Max-Planck Institute of Molecular Plant Physiology, 14476 Potsdam-Golm, Germany
296 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...