Amphibian gut microbiota shifts differentially in community structure but converges on habitat-specific predicted functions View Full Text


Ontology type: schema:ScholarlyArticle      Open Access: True


Article Info

DATE

2016-12-15

AUTHORS

Molly C. Bletz, Daniel J. Goedbloed, Eugenia Sanchez, Timm Reinhardt, Christoph C. Tebbe, Sabin Bhuju, Robert Geffers, Michael Jarek, Miguel Vences, Sebastian Steinfartz

ABSTRACT

Complex microbial communities inhabit vertebrate digestive systems but thorough understanding of the ecological dynamics and functions of host-associated microbiota within natural habitats is limited. We investigate the role of environmental conditions in shaping gut and skin microbiota under natural conditions by performing a field survey and reciprocal transfer experiments with salamander larvae inhabiting two distinct habitats (ponds and streams). We show that gut and skin microbiota are habitat-specific, demonstrating environmental factors mediate community structure. Reciprocal transfer reveals that gut microbiota, but not skin microbiota, responds differentially to environmental change. Stream-to-pond larvae shift their gut microbiota to that of pond-to-pond larvae, whereas pond-to-stream larvae change to a community structure distinct from both habitat controls. Predicted functions, however, match that of larvae from the destination habitats in both cases. Thus, microbial function can be matched without taxonomic coherence and gut microbiota appears to exhibit metagenomic plasticity. More... »

PAGES

13699

References to SciGraph publications

  • 2013-09. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences in NATURE BIOTECHNOLOGY
  • 2013-01. Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing in NATURE METHODS
  • 2006-12. An obesity-associated gut microbiome with increased capacity for energy harvest in NATURE
  • 2013-07. Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes in THE ISME JOURNAL
  • 2013-09. Linking the evolution of habitat choice to ecosystem functioning: direct and indirect effects of pond-reproducing fire salamanders on aquatic-terrestrial subsidies in OECOLOGIA
  • 1997-02. Babel, or the ecological stability discussions: an inventory and analysis of terminology and a guide for avoiding confusion in OECOLOGIA
  • 2016-12. 16S rRNA gene sequencing of mock microbial populations- impact of DNA extraction method, primer choice and sequencing platform in BMC MICROBIOLOGY
  • 2012-03. An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea in THE ISME JOURNAL
  • 2016-01. Diet-induced extinctions in the gut microbiota compound over generations in NATURE
  • 2017-02. Cutaneous Bacterial Communities of a Poisonous Salamander: a Perspective from Life Stages, Body Parts and Environmental Conditions in MICROBIAL ECOLOGY
  • 2011-06. Metagenomic biomarker discovery and explanation in GENOME BIOLOGY
  • 2016-12. Contributions of tropodithietic acid and biofilm formation to the probiotic activity of Phaeobacter inhibens in BMC MICROBIOLOGY
  • 2015-03. Larval deposition behaviour and maternal investment of females reflect differential habitat adaptation in a genetically diverging salamander population in BEHAVIORAL ECOLOGY AND SOCIOBIOLOGY
  • 2010-05. QIIME allows analysis of high-throughput community sequencing data in NATURE METHODS
  • 2007-10-18. An ecological and evolutionary perspective on human–microbe mutualism and disease in NATURE
  • 2016-12. Changes of diet and dominant intestinal microbes in farmland frogs in BMC MICROBIOLOGY
  • 2016-04. Gut bacterial communities across tadpole ecomorphs in two diverse tropical anuran faunas in THE SCIENCE OF NATURE
  • 2015-11. Marked seasonal variation in the wild mouse gut microbiota in THE ISME JOURNAL
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1038/ncomms13699

    DOI

    http://dx.doi.org/10.1038/ncomms13699

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1017087473

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/27976718


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